Literature DB >> 28872296

Development of Selective Peptide Catalysts with Secondary Structural Frameworks.

Kengo Akagawa1, Kazuaki Kudo1.   

Abstract

Enzymes are biogenic catalysts that enable the vital activity of organisms. Enzymes promote reactions in a selective manner with a high level of substrate recognition ability. The development of such a sophisticated catalyst has been one of the goals for chemists. A synthetic peptide is the prime candidate to realize an enzyme-like catalyst. Considering that the catalytic function of enzymes derives from their molecular structures, the key for the creation of a peptide catalyst might be the introduction of a specific three-dimensional structure. Our motivation was to find a peptide catalyst with a versatile secondary structural framework and apply the peptide to a variety of selective reactions. Although helical-peptide-catalyzed asymmetric epoxidation of enones is popular, no other highly enantioselective reaction with a helical peptide has been reported. It was found that resin-supported α-helical polyleucine promoted asymmetric conjugate addition of a carbon nucleophile to enones via the formation of an iminium intermediate at the N-terminal amino group. By changing the helical chain to a repetitive Leu-Leu-Aib (Aib = α-aminoisobutyric acid) sequence and introducing a few amino acids to the N-terminus, a highly enantioselective peptide catalyst was obtained. The helical peptide catalyst was applicable for a tandem enamine/iminium-mediated reaction and asymmetric epoxidation of enones. Although the extension of the helical peptide to conjugate addition of a nucleophile to an enal was not successful simply by attaching proline to the N-terminus of the helix, the incorporation of a β-turn motif was effective to improve the catalytic performance. In the sequence of such a turn-helix-type peptide, the helical part was seemingly distant from the N-terminal amino group; however, the hydrophobicity, structure, and chirality of the helix largely affected the reaction. The turn-helix-type peptide promoted a wide range of asymmetric reactions: conjugated additions of hydride and carbon nucleophiles to enals via the iminium activation and α-oxyamination of aldehydes via the enamine activation. The peptides with turn-helix and helix frameworks were also employed for several reactions that were difficult to achieve with low-molecular-weight catalysts: enzyme-cocatalyzed asymmetric oxidation in water, diastereo- and enantioselective cyclopropanation, regioselective reduction of dienals, kinetic resolution of planar-chiral compounds, and desymmetrization to induce planar chirality. To explore other types of peptide catalysts, a combinatorial library screening was performed. On the way, it was revealed that a histidyl residue assisted to accelerate a reaction via reversible addition to an iminium intermediate. Through the screening of random peptide libraries, novel peptide sequences for efficient and enantioselective conjugate addition were discovered. Although we have no information about the molecular structure of the newly found peptides, they can be an entry point for establishing a versatile framework of peptide catalysts.

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Year:  2017        PMID: 28872296     DOI: 10.1021/acs.accounts.7b00211

Source DB:  PubMed          Journal:  Acc Chem Res        ISSN: 0001-4842            Impact factor:   22.384


  9 in total

1.  Isolating Conformers to Assess Dynamics of Peptidic Catalysts Using Computationally Designed Macrocyclic Peptides.

Authors:  Elizabeth A Stone; Parisa Hosseinzadeh; Timothy W Craven; Michael J Robertson; Yaodong Han; Sheng-Ying Hsieh; Anthony J Metrano; David Baker; Scott J Miller
Journal:  ACS Catal       Date:  2021-03-25       Impact factor: 13.084

2.  Tunable and Cooperative Catalysis for Enantioselective Pictet-Spengler Reaction with Varied Nitrogen-Containing Heterocyclic Carboxaldehydes.

Authors:  Yuk-Cheung Chan; Marcus H Sak; Scott A Frank; Scott J Miller
Journal:  Angew Chem Int Ed Engl       Date:  2021-10-07       Impact factor: 15.336

Review 3.  Asymmetric Catalysis Mediated by Synthetic Peptides, Version 2.0: Expansion of Scope and Mechanisms.

Authors:  Anthony J Metrano; Alex J Chinn; Christopher R Shugrue; Elizabeth A Stone; Byoungmoo Kim; Scott J Miller
Journal:  Chem Rev       Date:  2020-09-24       Impact factor: 60.622

4.  Peptide-Catalyzed Fragment Couplings that Form Axially Chiral Non-C2 -Symmetric Biaryls.

Authors:  Gavin Coombs; Marcus H Sak; Scott J Miller
Journal:  Angew Chem Int Ed Engl       Date:  2019-12-30       Impact factor: 15.336

5.  Peptide-Based Catalysts Reach the Outer Sphere through Remote Desymmetrization and Atroposelectivity.

Authors:  Anthony J Metrano; Scott J Miller
Journal:  Acc Chem Res       Date:  2018-12-11       Impact factor: 22.384

6.  On the evolution of protein-adenine binding.

Authors:  Aya Narunsky; Amit Kessel; Ron Solan; Vikram Alva; Rachel Kolodny; Nir Ben-Tal
Journal:  Proc Natl Acad Sci U S A       Date:  2020-02-20       Impact factor: 11.205

7.  Design and Synthesis of Helical N-Terminal L-Prolyl Oligopeptides Possessing Hydrocarbon Stapling.

Authors:  Atsushi Ueda; Mei Higuchi; Kazuki Sato; Tomohiro Umeno; Masakazu Tanaka
Journal:  Molecules       Date:  2020-10-13       Impact factor: 4.411

8.  The role of β-hairpin conformation in ester hydrolysis peptide catalysts based on a TrpZip scaffold.

Authors:  Xinyu Liu; Riley Waters; Hannah E Gilbert; Gage T Barroso; Kelsey M Boyle; Leah S Witus
Journal:  RSC Adv       Date:  2021-07-06       Impact factor: 4.036

9.  Discovery of phosphotyrosine-binding oligopeptides with supramolecular target selectivity.

Authors:  Ana S Pina; Leonor Morgado; Krystyna L Duncan; Sara Carvalho; Henrique F Carvalho; Arménio J M Barbosa; Beatriz de P Mariz; Inês P Moreira; Daniela Kalafatovic; Bruno M Morais Faustino; Vishal Narang; Tong Wang; Charalampos G Pappas; Isabel Ferreira; A Cecília A Roque; Rein V Ulijn
Journal:  Chem Sci       Date:  2021-12-07       Impact factor: 9.825

  9 in total

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