Literature DB >> 34659874

Isolating Conformers to Assess Dynamics of Peptidic Catalysts Using Computationally Designed Macrocyclic Peptides.

Elizabeth A Stone1, Parisa Hosseinzadeh2, Timothy W Craven2, Michael J Robertson3, Yaodong Han1, Sheng-Ying Hsieh1, Anthony J Metrano1, David Baker2, Scott J Miller1.   

Abstract

Studying the relationship between catalyst conformational dynamics and selectivity in an asymmetric reaction is a challenge. In this study, cyclic peptides were computationally designed to stabilize different ground state conformations of a highly effective, flexible tetrapeptide catalyst for the atroposelective bromination of N-aryl quinazolinones. Through a combination of computational and experimental techniques, we have determined that dynamic movement of the lead catalyst plays a crucial role in achieving high enantioselectivity in the reaction of study. This approach may also serve as a valuable method for investigating the mechanism of other peptide-catalyzed transformations.

Entities:  

Year:  2021        PMID: 34659874      PMCID: PMC8513768          DOI: 10.1021/acscatal.1c01097

Source DB:  PubMed          Journal:  ACS Catal            Impact factor:   13.084


  24 in total

1.  Noncovalent interactions: a challenge for experiment and theory.

Authors:  K Müller-Dethlefs; P Hobza
Journal:  Chem Rev       Date:  2000-01-12       Impact factor: 60.622

Review 2.  Asymmetric catalysis with peptides.

Authors:  Helma Wennemers
Journal:  Chem Commun (Camb)       Date:  2011-10-12       Impact factor: 6.222

Review 3.  Enzyme catalysis: not different, just better.

Authors:  J R Knowles
Journal:  Nature       Date:  1991-03-14       Impact factor: 49.962

Review 4.  Foldamer Catalysis.

Authors:  Zebediah C Girvin; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2020-09-29       Impact factor: 15.419

5.  Beta-hairpin families in globular proteins.

Authors:  B L Sibanda; J M Thornton
Journal:  Nature       Date:  1985 Jul 11-17       Impact factor: 49.962

6.  Development of Selective Peptide Catalysts with Secondary Structural Frameworks.

Authors:  Kengo Akagawa; Kazuaki Kudo
Journal:  Acc Chem Res       Date:  2017-09-05       Impact factor: 22.384

7.  Structural studies of β-turn-containing peptide catalysts for atroposelective quinazolinone bromination.

Authors:  A J Metrano; N C Abascal; B Q Mercado; E K Paulson; S J Miller
Journal:  Chem Commun (Camb)       Date:  2016-03-10       Impact factor: 6.222

8.  Molecular Dynamics Simulations of a Conformationally Mobile Peptide-Based Catalyst for Atroposelective Bromination.

Authors:  Xin Cindy Yan; Anthony J Metrano; Michael J Robertson; Nadia C Abascal; Julian Tirado-Rives; Scott J Miller; William L Jorgensen
Journal:  ACS Catal       Date:  2018-09-13       Impact factor: 13.084

9.  Enantioselective synthesis of 3-arylquinazolin-4(3H)-ones via peptide-catalyzed atroposelective bromination.

Authors:  Matthew E Diener; Anthony J Metrano; Shuhei Kusano; Scott J Miller
Journal:  J Am Chem Soc       Date:  2015-09-18       Impact factor: 15.419

10.  Peptide-Based Catalysts Reach the Outer Sphere through Remote Desymmetrization and Atroposelectivity.

Authors:  Anthony J Metrano; Scott J Miller
Journal:  Acc Chem Res       Date:  2018-12-11       Impact factor: 22.384

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  3 in total

1.  Kinetic Analysis of a Cysteine-Derived Thiyl-Catalyzed Asymmetric Vinylcyclopropane Cycloaddition Reflects Numerous Attractive Noncovalent Interactions.

Authors:  Amanda K Turek; Marcus H Sak; Scott J Miller
Journal:  J Am Chem Soc       Date:  2021-09-23       Impact factor: 16.383

2.  Tailoring Reaction Selectivity by Modulating a Catalytic Diad on a Foldamer Scaffold.

Authors:  Mary Katherine Andrews; Xinyu Liu; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2022-01-25       Impact factor: 16.383

3.  Conformational enantiodiscrimination for asymmetric construction of atropisomers.

Authors:  Shouyi Cen; Nini Huang; Dongsheng Lian; Ahui Shen; Mei-Xin Zhao; Zhipeng Zhang
Journal:  Nat Commun       Date:  2022-08-12       Impact factor: 17.694

  3 in total

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