Literature DB >> 28989115

Osteoarthritis year in review 2017: genetics and epigenetics.

M J Peffers1, P Balaskas2, A Smagul3.   

Abstract

OBJECTIVE: The purpose of this review is to describe highlights from original research publications related to osteoarthritis (OA), epigenetics and genomics with the intention of recognising significant advances.
DESIGN: To identify relevant papers a Pubmed literature search was conducted for articles published between April 2016 and April 2017 using the search terms 'osteoarthritis' together with 'genetics', 'genomics', 'epigenetics', 'microRNA', 'lncRNA', 'DNA methylation' and 'histone modification'.
RESULTS: The search term OA generated almost 4000 references. Publications using the combination of descriptors OA and genetics provided the most references (82 references). However this was reduced compared to the same period in the previous year; 8.1-2.1% (expressed as a percentage of the total publications combining the terms OA and genetics). Publications combining the terms OA with genomics (29 references), epigenetics (16 references), long non-coding RNA (lncRNA) (11 references; including the identification of novel lncRNAs in OA), DNA methylation (21 references), histone modification (3 references) and microRNA (miR) (79 references) were reviewed. Potential OA therapeutics such as histone deacetylase (HDAC) inhibitors have been identified. A number of non-coding RNAs may also provide targets for future treatments.
CONCLUSION: There continues to be a year on year increase in publications researching miRs in OA (expressed as a percentage of the total publications), with a doubling over the last 4 years. An overview on the last year's progress within the fields of epigenetics and genomics with respect to OA will be given.
Copyright © 2017 Osteoarthritis Research Society International. All rights reserved.

Entities:  

Keywords:  Epigenetics; Genetics; Non-coding RNA; Osteoarthritis

Mesh:

Year:  2017        PMID: 28989115      PMCID: PMC6292677          DOI: 10.1016/j.joca.2017.09.009

Source DB:  PubMed          Journal:  Osteoarthritis Cartilage        ISSN: 1063-4584            Impact factor:   6.576


  38 in total

1.  The rs4238326 polymorphism in ALDH1A2 gene potentially associated with non-post traumatic knee osteoarthritis susceptibility: a two-stage population-based study.

Authors:  M Chu; X Zhu; C Wang; J Rong; Y Wang; S Wang; B Xing; Y Tao; X Zhuang; L Jiang
Journal:  Osteoarthritis Cartilage       Date:  2017-01-12       Impact factor: 6.576

2.  Genome-wide DNA methylation analysis of articular chondrocytes identifies TRAF1, CTGF, and CX3CL1 genes as hypomethylated in osteoarthritis.

Authors:  Like Zhao; Qian Wang; Chunmei Zhang; Cibo Huang
Journal:  Clin Rheumatol       Date:  2017-05-03       Impact factor: 2.980

3.  A functional polymorphism in the 5' UTR of GDF5 is associated with susceptibility to osteoarthritis.

Authors:  Yoshinari Miyamoto; Akihiko Mabuchi; Dongquan Shi; Toshikazu Kubo; Yoshio Takatori; Susumu Saito; Mikihiro Fujioka; Akihiro Sudo; Atsumasa Uchida; Seizo Yamamoto; Koichi Ozaki; Masaharu Takigawa; Toshihiro Tanaka; Yusuke Nakamura; Qing Jiang; Shiro Ikegawa
Journal:  Nat Genet       Date:  2007-03-25       Impact factor: 38.330

4.  Intra-articular injection of microRNA-140 (miRNA-140) alleviates osteoarthritis (OA) progression by modulating extracellular matrix (ECM) homeostasis in rats.

Authors:  H-B Si; Y Zeng; S-Y Liu; Z-K Zhou; Y-N Chen; J-Q Cheng; Y-R Lu; B Shen
Journal:  Osteoarthritis Cartilage       Date:  2017-06-21       Impact factor: 6.576

5.  Genome-wide association and functional studies identify a role for matrix Gla protein in osteoarthritis of the hand.

Authors:  Wouter den Hollander; Cindy G Boer; Deborah J Hart; Michelle S Yau; Yolande F M Ramos; Sarah Metrustry; Linda Broer; Joris Deelen; L Adrienne Cupples; Fernando Rivadeneira; Margreet Kloppenburg; Marjolein Peters; Tim D Spector; Albert Hofman; P Eline Slagboom; Rob G H H Nelissen; André G Uitterlinden; David T Felson; Ana M Valdes; Ingrid Meulenbelt; Joyce J B van Meurs
Journal:  Ann Rheum Dis       Date:  2017-08-30       Impact factor: 19.103

6.  Assessment of DNA Methylation Patterns in the Bone and Cartilage of a Nonhuman Primate Model of Osteoarthritis.

Authors:  Genevieve Housman; Lorena M Havill; Ellen E Quillen; Anthony G Comuzzie; Anne C Stone
Journal:  Cartilage       Date:  2018-02-19       Impact factor: 4.634

7.  Serum microRNA array analysis identifies miR-140-3p, miR-33b-3p and miR-671-3p as potential osteoarthritis biomarkers involved in metabolic processes.

Authors:  E Ntoumou; M Tzetis; M Braoudaki; G Lambrou; M Poulou; K Malizos; N Stefanou; L Anastasopoulou; A Tsezou
Journal:  Clin Epigenetics       Date:  2017-12-12       Impact factor: 6.551

8.  DOT1L safeguards cartilage homeostasis and protects against osteoarthritis.

Authors:  Silvia Monteagudo; Frederique M F Cornelis; Carolina Aznar-Lopez; Ploi Yibmantasiri; Laura-An Guns; Peter Carmeliet; Frédéric Cailotto; Rik J Lories
Journal:  Nat Commun       Date:  2017-06-19       Impact factor: 14.919

9.  CpG methylation patterns of human mitochondrial DNA.

Authors:  Baojing Liu; Qingqing Du; Lu Chen; Guangping Fu; Shujin Li; Lihong Fu; Xiaojing Zhang; Chunling Ma; Cong Bin
Journal:  Sci Rep       Date:  2016-03-21       Impact factor: 4.379

10.  Ancient selection for derived alleles at a GDF5 enhancer influencing human growth and osteoarthritis risk.

Authors:  Terence D Capellini; Hao Chen; Jiaxue Cao; Andrew C Doxey; Ata M Kiapour; Michael Schoor; David M Kingsley
Journal:  Nat Genet       Date:  2017-07-03       Impact factor: 38.330

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  19 in total

Review 1.  Genome Engineering for Osteoarthritis: From Designer Cells to Disease-Modifying Drugs.

Authors:  Yun-Rak Choi; Kelsey H Collins; Jin-Woo Lee; Ho-Jung Kang; Farshid Guilak
Journal:  Tissue Eng Regen Med       Date:  2019-01-05       Impact factor: 4.169

2.  Validation of scoring hip osteoarthritis with MRI (SHOMRI) scores using hip arthroscopy as a standard of reference.

Authors:  Jan Neumann; Alan L Zhang; Benedikt J Schwaiger; Michael A Samaan; Richard Souza; Sarah C Foreman; Gabby B Joseph; Trevor Grace; Sharmila Majumdar; Thomas M Link
Journal:  Eur Radiol       Date:  2018-07-09       Impact factor: 5.315

3.  Biochemical Markers for the Early Identification of Osteoarthritis: Systematic Review and Meta-Analysis.

Authors:  Guomin Ren; Roman J Krawetz
Journal:  Mol Diagn Ther       Date:  2018-12       Impact factor: 4.074

4.  Combined bioinformatics analysis reveals gene expression and DNA methylation patterns in osteoarthritis.

Authors:  Delei Song; Wei Qi; Ming Lv; Chun Yuan; Kangsong Tian; Feng Zhang
Journal:  Mol Med Rep       Date:  2018-04-12       Impact factor: 2.952

5.  Effect of Cholecystectomy on the Occurrence of Knee Osteoarthritis.

Authors:  Ling-Yuan Zeng; Shu-Yan Yang; Zhi-Qiang Zhang; Tao Wang; Yu-Ze Wang; Xiao-Chun Wei
Journal:  Orthop Surg       Date:  2020-06-01       Impact factor: 2.071

6.  Association between GDF5 rs143383 genetic polymorphism and musculoskeletal degenerative diseases susceptibility: a meta-analysis.

Authors:  Xin Huang; Weiyue Zhang; Zengwu Shao
Journal:  BMC Med Genet       Date:  2018-09-14       Impact factor: 2.103

7.  Nuclear Magnetic Resonance Therapy Modulates the miRNA Profile in Human Primary OA Chondrocytes and Antagonizes Inflammation in Tc28/2a Cells.

Authors:  Bibiane Steinecker-Frohnwieser; Birgit Lohberger; Nicole Eck; Anda Mann; Cornelia Kratschmann; Andreas Leithner; Werner Kullich; Lukas Weigl
Journal:  Int J Mol Sci       Date:  2021-05-31       Impact factor: 5.923

8.  Arthroprotective Effects of Cf-02 Sharing Structural Similarity with Quercetin.

Authors:  Feng-Cheng Liu; Jeng-Wei Lu; Chiao-Yun Chien; Hsu-Shan Huang; Chia-Chung Lee; Shiu-Bii Lien; Leou-Chyr Lin; Liv Weichien Chen; Yi-Jung Ho; Min-Chung Shen; Ling-Jun Ho; Jenn-Haung Lai
Journal:  Int J Mol Sci       Date:  2018-05-14       Impact factor: 5.923

9.  Association of ADAMTS4 and ADAMTS5 polymorphisms with musculoskeletal degenerative diseases: a systematic review and meta-analysis.

Authors:  Jian-Zhong Huo; Xing-Hua Ji; Zhong-Yi Su; Peng Shang; Fei Gao
Journal:  Biosci Rep       Date:  2018-11-30       Impact factor: 3.840

10.  Long Non-coding RNA HOTTIP Promotes CCL3 Expression and Induces Cartilage Degradation by Sponging miR-455-3p.

Authors:  Guping Mao; Yan Kang; Ruifu Lin; Shu Hu; Ziji Zhang; Hongyi Li; Weiming Liao; Zhiqi Zhang
Journal:  Front Cell Dev Biol       Date:  2019-08-23
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