Literature DB >> 34450027

Deciphering osteoarthritis genetics across 826,690 individuals from 9 populations.

Cindy G Boer1, Konstantinos Hatzikotoulas2, Lorraine Southam2, Lilja Stefánsdóttir3, Yanfei Zhang4, Rodrigo Coutinho de Almeida5, Tian T Wu6, Jie Zheng7, April Hartley8, Maris Teder-Laving9, Anne Heidi Skogholt10, Chikashi Terao11, Eleni Zengini12, George Alexiadis13, Andrei Barysenka2, Gyda Bjornsdottir3, Maiken E Gabrielsen10, Arthur Gilly2, Thorvaldur Ingvarsson14, Marianne B Johnsen15, Helgi Jonsson16, Margreet Kloppenburg17, Almut Luetge10, Sigrun H Lund3, Reedik Mägi9, Massimo Mangino18, Rob R G H H Nelissen19, Manu Shivakumar20, Julia Steinberg21, Hiroshi Takuwa22, Laurent F Thomas23, Margo Tuerlings5, George C Babis24, Jason Pui Yin Cheung25, Jae Hee Kang26, Peter Kraft27, Steven A Lietman28, Dino Samartzis29, P Eline Slagboom5, Kari Stefansson30, Unnur Thorsteinsdottir30, Jonathan H Tobias31, André G Uitterlinden1, Bendik Winsvold32, John-Anker Zwart33, George Davey Smith34, Pak Chung Sham35, Gudmar Thorleifsson3, Tom R Gaunt7, Andrew P Morris36, Ana M Valdes37, Aspasia Tsezou38, Kathryn S E Cheah39, Shiro Ikegawa40, Kristian Hveem41, Tõnu Esko9, J Mark Wilkinson42, Ingrid Meulenbelt5, Ming Ta Michael Lee43, Joyce B J van Meurs1, Unnur Styrkársdóttir3, Eleftheria Zeggini44.   

Abstract

Osteoarthritis affects over 300 million people worldwide. Here, we conduct a genome-wide association study meta-analysis across 826,690 individuals (177,517 with osteoarthritis) and identify 100 independently associated risk variants across 11 osteoarthritis phenotypes, 52 of which have not been associated with the disease before. We report thumb and spine osteoarthritis risk variants and identify differences in genetic effects between weight-bearing and non-weight-bearing joints. We identify sex-specific and early age-at-onset osteoarthritis risk loci. We integrate functional genomics data from primary patient tissues (including articular cartilage, subchondral bone, and osteophytic cartilage) and identify high-confidence effector genes. We provide evidence for genetic correlation with phenotypes related to pain, the main disease symptom, and identify likely causal genes linked to neuronal processes. Our results provide insights into key molecular players in disease processes and highlight attractive drug targets to accelerate translation.
Copyright © 2021 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  drug targets; effector genes; functional genomics; genetic architecture; genome-wide association meta-analysis; osteoarthritis

Mesh:

Year:  2021        PMID: 34450027      PMCID: PMC8459317          DOI: 10.1016/j.cell.2021.07.038

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  217 in total

1.  The transcription factors L-Sox5 and Sox6 are essential for cartilage formation.

Authors:  P Smits; P Li; J Mandel; Z Zhang; J M Deng; R R Behringer; B de Crombrugghe; V Lefebvre
Journal:  Dev Cell       Date:  2001-08       Impact factor: 12.270

2.  Structure of the human M(2) muscarinic acetylcholine receptor gene and its promoter.

Authors:  C Zhou; A D Fryer; D B Jacoby
Journal:  Gene       Date:  2001-06-13       Impact factor: 3.688

3.  Cohort Profile: the HUNT Study, Norway.

Authors:  S Krokstad; A Langhammer; K Hveem; T L Holmen; K Midthjell; T R Stene; G Bratberg; J Heggland; J Holmen
Journal:  Int J Epidemiol       Date:  2012-08-09       Impact factor: 7.196

Review 4.  Understanding chondrodysplasia (cho): A comprehensive review of cho as an animal model of birth defects, disorders, and molecular mechanisms.

Authors:  Robert E Seegmiller; Cameron Foster; Jared L Burnham
Journal:  Birth Defects Res       Date:  2019-02-04       Impact factor: 2.344

5.  DECIPHER: Database of Chromosomal Imbalance and Phenotype in Humans Using Ensembl Resources.

Authors:  Helen V Firth; Shola M Richards; A Paul Bevan; Stephen Clayton; Manuel Corpas; Diana Rajan; Steven Van Vooren; Yves Moreau; Roger M Pettett; Nigel P Carter
Journal:  Am J Hum Genet       Date:  2009-04-02       Impact factor: 11.025

6.  Quality control and conduct of genome-wide association meta-analyses.

Authors:  Thomas W Winkler; Felix R Day; Damien C Croteau-Chonka; Andrew R Wood; Adam E Locke; Reedik Mägi; Teresa Ferreira; Tove Fall; Mariaelisa Graff; Anne E Justice; Jian'an Luan; Stefan Gustafsson; Joshua C Randall; Sailaja Vedantam; Tsegaselassie Workalemahu; Tuomas O Kilpeläinen; André Scherag; Tonu Esko; Zoltán Kutalik; Iris M Heid; Ruth J F Loos
Journal:  Nat Protoc       Date:  2014-04-24       Impact factor: 13.491

7.  Role of RANKL-RANK/osteoprotegerin molecular complex in bone remodeling and its immunopathologic implications.

Authors:  Sarvraj Singh Kohli; Virinder Singh Kohli
Journal:  Indian J Endocrinol Metab       Date:  2011-07

8.  Whole-Genome Sequencing Coupled to Imputation Discovers Genetic Signals for Anthropometric Traits.

Authors:  Ioanna Tachmazidou; Dániel Süveges; Josine L Min; Graham R S Ritchie; Julia Steinberg; Klaudia Walter; Valentina Iotchkova; Jeremy Schwartzentruber; Jie Huang; Yasin Memari; Shane McCarthy; Andrew A Crawford; Cristina Bombieri; Massimiliano Cocca; Aliki-Eleni Farmaki; Tom R Gaunt; Pekka Jousilahti; Marjolein N Kooijman; Benjamin Lehne; Giovanni Malerba; Satu Männistö; Angela Matchan; Carolina Medina-Gomez; Sarah J Metrustry; Abhishek Nag; Ioanna Ntalla; Lavinia Paternoster; Nigel W Rayner; Cinzia Sala; William R Scott; Hashem A Shihab; Lorraine Southam; Beate St Pourcain; Michela Traglia; Katerina Trajanoska; Gialuigi Zaza; Weihua Zhang; María S Artigas; Narinder Bansal; Marianne Benn; Zhongsheng Chen; Petr Danecek; Wei-Yu Lin; Adam Locke; Jian'an Luan; Alisa K Manning; Antonella Mulas; Carlo Sidore; Anne Tybjaerg-Hansen; Anette Varbo; Magdalena Zoledziewska; Chris Finan; Konstantinos Hatzikotoulas; Audrey E Hendricks; John P Kemp; Alireza Moayyeri; Kalliope Panoutsopoulou; Michal Szpak; Scott G Wilson; Michael Boehnke; Francesco Cucca; Emanuele Di Angelantonio; Claudia Langenberg; Cecilia Lindgren; Mark I McCarthy; Andrew P Morris; Børge G Nordestgaard; Robert A Scott; Martin D Tobin; Nicholas J Wareham; Paul Burton; John C Chambers; George Davey Smith; George Dedoussis; Janine F Felix; Oscar H Franco; Giovanni Gambaro; Paolo Gasparini; Christopher J Hammond; Albert Hofman; Vincent W V Jaddoe; Marcus Kleber; Jaspal S Kooner; Markus Perola; Caroline Relton; Susan M Ring; Fernando Rivadeneira; Veikko Salomaa; Timothy D Spector; Oliver Stegle; Daniela Toniolo; André G Uitterlinden; Inês Barroso; Celia M T Greenwood; John R B Perry; Brian R Walker; Adam S Butterworth; Yali Xue; Richard Durbin; Kerrin S Small; Nicole Soranzo; Nicholas J Timpson; Eleftheria Zeggini
Journal:  Am J Hum Genet       Date:  2017-05-25       Impact factor: 11.025

9.  Genome-wide association analyses identify 143 risk variants and putative regulatory mechanisms for type 2 diabetes.

Authors:  Angli Xue; Yang Wu; Zhihong Zhu; Futao Zhang; Kathryn E Kemper; Zhili Zheng; Loic Yengo; Luke R Lloyd-Jones; Julia Sidorenko; Yeda Wu; Allan F McRae; Peter M Visscher; Jian Zeng; Jian Yang
Journal:  Nat Commun       Date:  2018-07-27       Impact factor: 14.919

10.  The transcriptional coactivator and histone acetyltransferase CBP regulates neural precursor cell development and migration.

Authors:  Melanie Schoof; Michael Launspach; Dörthe Holdhof; Lynhda Nguyen; Verena Engel; Severin Filser; Finn Peters; Jana Immenschuh; Malte Hellwig; Judith Niesen; Volker Mall; Birgit Ertl-Wagner; Christian Hagel; Michael Spohn; Beat Lutz; Jan Sedlacik; Daniela Indenbirken; Daniel J Merk; Ulrich Schüller
Journal:  Acta Neuropathol Commun       Date:  2019-12-05       Impact factor: 7.801

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  24 in total

1.  NOD/RIPK2 signalling pathway contributes to osteoarthritis susceptibility.

Authors:  Michael J Jurynec; Catherine M Gavile; Matthew Honeggar; Ying Ma; Shivakumar R Veerabhadraiah; Kendra A Novak; Kazuyuki Hoshijima; Nikolas H Kazmers; David J Grunwald
Journal:  Ann Rheum Dis       Date:  2022-06-22       Impact factor: 27.973

2.  Familial Clustering and Genetic Analysis of Severe Thumb Carpometacarpal Joint Osteoarthritis in a Large Statewide Cohort.

Authors:  Catherine M Gavile; Nikolas H Kazmers; Kendra A Novak; Huong D Meeks; Zhe Yu; Joy L Thomas; Channing Hansen; Tyler Barker; Michael J Jurynec
Journal:  J Hand Surg Am       Date:  2022-09-29       Impact factor: 2.342

3.  Using multivariable Mendelian randomization to estimate the causal effect of bone mineral density on osteoarthritis risk, independently of body mass index.

Authors:  April Hartley; Eleanor Sanderson; Raquel Granell; Lavinia Paternoster; Jie Zheng; George Davey Smith; Lorraine Southam; Konstantinos Hatzikotoulas; Cindy G Boer; Joyce van Meurs; Eleftheria Zeggini; Celia L Gregson; Jon H Tobias
Journal:  Int J Epidemiol       Date:  2022-08-10       Impact factor: 9.685

Review 4.  Osteoarthritis Pathophysiology: Therapeutic Target Discovery may Require a Multifaceted Approach.

Authors:  Tonia L Vincent; Tamara Alliston; Mohit Kapoor; Richard F Loeser; Linda Troeberg; Christopher B Little
Journal:  Clin Geriatr Med       Date:  2022-05       Impact factor: 3.529

5.  Editor's Spotlight/Take 5: Is Our Science Representative? A Systematic Review of Racial and Ethnic Diversity in Orthopaedic Clinical Trials from 2000 to 2020.

Authors:  Seth S Leopold
Journal:  Clin Orthop Relat Res       Date:  2022-03-23       Impact factor: 4.176

Review 6.  Application of Induced Pluripotent Stem Cells for Disease Modeling and 3D Model Construction: Focus on Osteoarthritis.

Authors:  Joel Jihwan Hwang; Jinhyeok Choi; Yeri Alice Rim; Yoojun Nam; Ji Hyeon Ju
Journal:  Cells       Date:  2021-11-05       Impact factor: 6.600

Review 7.  Insights into the molecular landscape of osteoarthritis in human tissues.

Authors:  Georgia Katsoula; Peter Kreitmaier; Eleftheria Zeggini
Journal:  Curr Opin Rheumatol       Date:  2022-01-01       Impact factor: 5.006

Review 8.  Osteoarthritis year in review: genetics, genomics, epigenetics.

Authors:  D A Young; M J Barter; J Soul
Journal:  Osteoarthritis Cartilage       Date:  2021-11-11       Impact factor: 6.576

9.  Identification of Transcription Factors Responsible for a Transforming Growth Factor-β-Driven Hypertrophy-like Phenotype in Human Osteoarthritic Chondrocytes.

Authors:  Nathalie G M Thielen; Margot Neefjes; Elly L Vitters; Henk M van Beuningen; Arjen B Blom; Marije I Koenders; Peter L E M van Lent; Fons A J van de Loo; Esmeralda N Blaney Davidson; Arjan P M van Caam; Peter M van der Kraan
Journal:  Cells       Date:  2022-04-05       Impact factor: 6.600

10.  Rare SLC13A1 variants associate with intervertebral disc disorder highlighting role of sulfate in disc pathology.

Authors:  Gyda Bjornsdottir; Lilja Stefansdottir; Gudmar Thorleifsson; Patrick Sulem; Kristjan Norland; Egil Ferkingstad; Asmundur Oddsson; Florian Zink; Sigrun H Lund; Muhammad S Nawaz; G Bragi Walters; Astros Th Skuladottir; Sigurjon A Gudjonsson; Gudmundur Einarsson; Gisli H Halldorsson; Valgerdur Bjarnadottir; Gardar Sveinbjornsson; Anna Helgadottir; Unnur Styrkarsdottir; Larus J Gudmundsson; Ole B Pedersen; Thomas Folkmann Hansen; Thomas Werge; Karina Banasik; Anders Troelsen; Soren T Skou; Lise Wegner Thørner; Christian Erikstrup; Kaspar Rene Nielsen; Susan Mikkelsen; Ingileif Jonsdottir; Aron Bjornsson; Ingvar H Olafsson; Elfar Ulfarsson; Josep Blondal; Arnor Vikingsson; Soren Brunak; Sisse R Ostrowski; Henrik Ullum; Unnur Thorsteinsdottir; Hreinn Stefansson; Daniel F Gudbjartsson; Thorgeir E Thorgeirsson; Kari Stefansson
Journal:  Nat Commun       Date:  2022-02-02       Impact factor: 17.694

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