Literature DB >> 28847824

DNA replication through a chromatin environment.

James M Bellush1,2, Iestyn Whitehouse3.   

Abstract

Compaction of the genome into the nuclear space is achieved by wrapping DNA around octameric assemblies of histone proteins to form nucleosomes, the fundamental repeating unit of chromatin. Aside from providing a means by which to fit larger genomes into the cell, chromatinization of DNA is a crucial means by which the cell regulates access to the genome. While the complex role that chromatin plays in gene transcription has been appreciated for a long time, it is now also apparent that crucial aspects of DNA replication are linked to the biology of chromatin. This review will focus on recent advances in our understanding of how the chromatin environment influences key aspects of DNA replication.This article is part of the themed issue 'Chromatin modifiers and remodellers in DNA repair and signalling'.
© 2017 The Author(s).

Keywords:  DNA replication; chromatin; nucleosome

Mesh:

Substances:

Year:  2017        PMID: 28847824      PMCID: PMC5577465          DOI: 10.1098/rstb.2016.0287

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  88 in total

Review 1.  Split decision: what happens to nucleosomes during DNA replication?

Authors:  Anthony T Annunziato
Journal:  J Biol Chem       Date:  2005-01-21       Impact factor: 5.157

2.  GINS maintains association of Cdc45 with MCM in replisome progression complexes at eukaryotic DNA replication forks.

Authors:  Agnieszka Gambus; Richard C Jones; Alberto Sanchez-Diaz; Masato Kanemaki; Frederick van Deursen; Ricky D Edmondson; Karim Labib
Journal:  Nat Cell Biol       Date:  2006-03-12       Impact factor: 28.824

3.  DNA replication timing of the human beta-globin domain is controlled by histone modification at the origin.

Authors:  Alon Goren; Amalia Tabib; Merav Hecht; Howard Cedar
Journal:  Genes Dev       Date:  2008-04-28       Impact factor: 11.361

4.  The Saccharomyces cerevisiae DNA polymerase alpha catalytic subunit interacts with Cdc68/Spt16 and with Pob3, a protein similar to an HMG1-like protein.

Authors:  J Wittmeyer; T Formosa
Journal:  Mol Cell Biol       Date:  1997-07       Impact factor: 4.272

5.  Chromatin Constrains the Initiation and Elongation of DNA Replication.

Authors:  Sujan Devbhandari; Jieqing Jiang; Charanya Kumar; Iestyn Whitehouse; Dirk Remus
Journal:  Mol Cell       Date:  2016-12-15       Impact factor: 17.970

6.  Intrinsic coupling of lagging-strand synthesis to chromatin assembly.

Authors:  Duncan J Smith; Iestyn Whitehouse
Journal:  Nature       Date:  2012-03-14       Impact factor: 49.962

7.  The histone H4 Lys 20 methyltransferase PR-Set7 regulates replication origins in mammalian cells.

Authors:  Mathieu Tardat; Julien Brustel; Olivier Kirsh; Christine Lefevbre; Mary Callanan; Claude Sardet; Eric Julien
Journal:  Nat Cell Biol       Date:  2010-10-17       Impact factor: 28.824

8.  Structural insight into how the human helicase subunit MCM2 may act as a histone chaperone together with ASF1 at the replication fork.

Authors:  Nicolas Richet; Danni Liu; Pierre Legrand; Christophe Velours; Armelle Corpet; Albane Gaubert; May Bakail; Gwenaelle Moal-Raisin; Raphael Guerois; Christel Compper; Arthur Besle; Berengère Guichard; Genevieve Almouzni; Françoise Ochsenbein
Journal:  Nucleic Acids Res       Date:  2015-01-23       Impact factor: 16.971

9.  Modulation of p53 function by SET8-mediated methylation at lysine 382.

Authors:  Xiaobing Shi; Ioulia Kachirskaia; Hiroshi Yamaguchi; Lisandra E West; Hong Wen; Evelyn W Wang; Sucharita Dutta; Ettore Appella; Or Gozani
Journal:  Mol Cell       Date:  2007-08-17       Impact factor: 17.970

10.  Chromatin Controls DNA Replication Origin Selection, Lagging-Strand Synthesis, and Replication Fork Rates.

Authors:  Christoph F Kurat; Joseph T P Yeeles; Harshil Patel; Anne Early; John F X Diffley
Journal:  Mol Cell       Date:  2016-12-15       Impact factor: 17.970

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  12 in total

Review 1.  Genome maintenance functions of the INO80 chromatin remodeller.

Authors:  Ashby J Morrison
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-10-05       Impact factor: 6.237

Review 2.  The tale of a tail: histone H4 acetylation and the repair of DNA breaks.

Authors:  Surbhi Dhar; Ozge Gursoy-Yuzugullu; Ramya Parasuram; Brendan D Price
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-10-05       Impact factor: 6.237

3.  Chromatin modifiers and remodellers in DNA repair and signalling.

Authors:  Penny A Jeggo; Jessica A Downs; Susan M Gasser
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-10-05       Impact factor: 6.237

Review 4.  Transcription-associated events affecting genomic integrity.

Authors:  Robin Sebastian; Philipp Oberdoerffer
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-10-05       Impact factor: 6.237

5.  Multisite Substrate Recognition in Asf1-Dependent Acetylation of Histone H3 K56 by Rtt109.

Authors:  Lin Zhang; Albert Serra-Cardona; Hui Zhou; Mingzhu Wang; Na Yang; Zhiguo Zhang; Rui-Ming Xu
Journal:  Cell       Date:  2018-07-26       Impact factor: 41.582

6.  Single-molecule mapping of replisome progression.

Authors:  Clémence Claussin; Jacob Vazquez; Iestyn Whitehouse
Journal:  Mol Cell       Date:  2022-03-02       Impact factor: 19.328

7.  Asymmetric histone inheritance via strand-specific incorporation and biased replication fork movement.

Authors:  Matthew Wooten; Jonathan Snedeker; Zehra F Nizami; Xinxing Yang; Rajesh Ranjan; Elizabeth Urban; Jee Min Kim; Joseph Gall; Jie Xiao; Xin Chen
Journal:  Nat Struct Mol Biol       Date:  2019-07-29       Impact factor: 15.369

8.  Gcn5 and Esa1 function as histone crotonyltransferases to regulate crotonylation-dependent transcription.

Authors:  Leonie Kollenstart; Anton J L de Groot; George M C Janssen; Xue Cheng; Kees Vreeken; Fabrizio Martino; Jacques Côté; Peter A van Veelen; Haico van Attikum
Journal:  J Biol Chem       Date:  2019-11-07       Impact factor: 5.157

9.  Epigenetics Identifier screens reveal regulators of chromatin acylation and limited specificity of acylation antibodies.

Authors:  Leonie Kollenstart; Sophie C van der Horst; Kees Vreeken; George M C Janssen; Fabrizio Martino; Hanneke Vlaming; Peter A van Veelen; Fred van Leeuwen; Haico van Attikum
Journal:  Sci Rep       Date:  2021-06-17       Impact factor: 4.379

10.  Intrinsic elasticity of nucleosomes is encoded by histone variants and calibrated by their binding partners.

Authors:  Daniël P Melters; Mary Pitman; Tatini Rakshit; Emilios K Dimitriadis; Minh Bui; Garegin A Papoian; Yamini Dalal
Journal:  Proc Natl Acad Sci U S A       Date:  2019-11-11       Impact factor: 11.205

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