Literature DB >> 18443145

DNA replication timing of the human beta-globin domain is controlled by histone modification at the origin.

Alon Goren1, Amalia Tabib, Merav Hecht, Howard Cedar.   

Abstract

The human beta-globin genes constitute a large chromosomal domain that is developmentally regulated. In nonerythroid cells, these genes replicate late in S phase, while in erythroid cells, replication is early. The replication origin is packaged with acetylated histones in erythroid cells, yet is associated with deacetylated histones in nonerythroid cells. Recruitment of histone acetylases to this origin brings about a transcription-independent shift to early replication in lymphocytes. In contrast, tethering of a histone deacetylase in erythroblasts causes a shift to late replication. These results suggest that histone modification at the origin serves as a binary switch for controlling replication timing.

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Year:  2008        PMID: 18443145      PMCID: PMC2377185          DOI: 10.1101/gad.468308

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  32 in total

1.  High-resolution mapping of human chromosome 11 by in situ hybridization with cosmid clones.

Authors:  P Lichter; C J Tang; K Call; G Hermanson; G A Evans; D Housman; D C Ward
Journal:  Science       Date:  1990-01-05       Impact factor: 47.728

2.  Mapping replication units in animal cells.

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Journal:  Cell       Date:  1989-06-16       Impact factor: 41.582

3.  Proliferation and maturation of human erythroid progenitors in liquid culture.

Authors:  E Fibach; D Manor; A Oppenheim; E A Rachmilewitz
Journal:  Blood       Date:  1989-01       Impact factor: 22.113

4.  Expression of human gamma-globin genes in human erythroleukemia (K562) cells.

Authors:  M Donovan-Peluso; S Acuto; M Swanson; C Dobkin; A Bank
Journal:  J Biol Chem       Date:  1987-12-15       Impact factor: 5.157

5.  Replication structure of the human beta-globin gene domain.

Authors:  D Kitsberg; S Selig; I Keshet; H Cedar
Journal:  Nature       Date:  1993-12-09       Impact factor: 49.962

6.  CLB5-dependent activation of late replication origins in S. cerevisiae.

Authors:  A D Donaldson; M K Raghuraman; K L Friedman; F R Cross; B J Brewer; W L Fangman
Journal:  Mol Cell       Date:  1998-08       Impact factor: 17.970

7.  A new logic for DNA engineering using recombination in Escherichia coli.

Authors:  Y Zhang; F Buchholz; J P Muyrers; A F Stewart
Journal:  Nat Genet       Date:  1998-10       Impact factor: 38.330

8.  Acetylated histones are associated with FMR1 in normal but not fragile X-syndrome cells.

Authors:  B Coffee; F Zhang; S T Warren; D Reines
Journal:  Nat Genet       Date:  1999-05       Impact factor: 38.330

9.  Delineation of DNA replication time zones by fluorescence in situ hybridization.

Authors:  S Selig; K Okumura; D C Ward; H Cedar
Journal:  EMBO J       Date:  1992-03       Impact factor: 11.598

10.  Regulation of mouse satellite DNA replication time.

Authors:  S Selig; M Ariel; R Goitein; M Marcus; H Cedar
Journal:  EMBO J       Date:  1988-02       Impact factor: 11.598

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  83 in total

1.  Mrc1 marks early-firing origins and coordinates timing and efficiency of initiation in fission yeast.

Authors:  Motoshi Hayano; Yutaka Kanoh; Seiji Matsumoto; Hisao Masai
Journal:  Mol Cell Biol       Date:  2011-04-25       Impact factor: 4.272

2.  Chromatin remodeler sucrose nonfermenting 2 homolog (SNF2H) is recruited onto DNA replication origins through interaction with Cdc10 protein-dependent transcript 1 (Cdt1) and promotes pre-replication complex formation.

Authors:  Nozomi Sugimoto; Takashi Yugawa; Masayoshi Iizuka; Tohru Kiyono; Masatoshi Fujita
Journal:  J Biol Chem       Date:  2011-09-20       Impact factor: 5.157

Review 3.  Regulation of DNA replication by chromatin structures: accessibility and recruitment.

Authors:  Makoto T Hayashi; Hisao Masukata
Journal:  Chromosoma       Date:  2010-08-03       Impact factor: 4.316

Review 4.  Charting histone modifications and the functional organization of mammalian genomes.

Authors:  Vicky W Zhou; Alon Goren; Bradley E Bernstein
Journal:  Nat Rev Genet       Date:  2010-11-30       Impact factor: 53.242

5.  Chromatin signatures of the Drosophila replication program.

Authors:  Matthew L Eaton; Joseph A Prinz; Heather K MacAlpine; George Tretyakov; Peter V Kharchenko; David M MacAlpine
Journal:  Genome Res       Date:  2010-12-22       Impact factor: 9.043

6.  Histone acetyltransferase Hbo1: catalytic activity, cellular abundance, and links to primary cancers.

Authors:  Masayoshi Iizuka; Yoshihisa Takahashi; Craig A Mizzen; Richard G Cook; Masatoshi Fujita; C David Allis; Henry F Frierson; Toshio Fukusato; M Mitchell Smith
Journal:  Gene       Date:  2009-02-10       Impact factor: 3.688

Review 7.  DNA replication timing, genome stability and cancer: late and/or delayed DNA replication timing is associated with increased genomic instability.

Authors:  Nathan Donley; Mathew J Thayer
Journal:  Semin Cancer Biol       Date:  2013-01-14       Impact factor: 15.707

8.  Epstein-Barr virus episome stability is coupled to a delay in replication timing.

Authors:  Jing Zhou; Andrew R Snyder; Paul M Lieberman
Journal:  J Virol       Date:  2008-12-10       Impact factor: 5.103

9.  Molecular analysis of the replication program in unicellular model organisms.

Authors:  M K Raghuraman; Bonita J Brewer
Journal:  Chromosome Res       Date:  2010-01       Impact factor: 5.239

10.  Domain-wide regulation of DNA replication timing during mammalian development.

Authors:  Benjamin D Pope; Ichiro Hiratani; David M Gilbert
Journal:  Chromosome Res       Date:  2010-01       Impact factor: 5.239

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