Literature DB >> 28841202

Microbial functional trait of rRNA operon copy numbers increases with organic levels in anaerobic digesters.

Linwei Wu1,2, Yunfeng Yang1, Si Chen3, Zhou Jason Shi2, Mengxin Zhao1, Zhenwei Zhu3, Sihang Yang1, Yuanyuan Qu4, Qiao Ma4, Zhili He2, Jizhong Zhou1,2,5,6, Qiang He3,7.   

Abstract

The ecological concept of the r-K life history strategy is widely applied in macro-ecology to characterize functional traits of taxa. However, its adoption in microbial communities is limited, owing to the lack of a measureable, convenient functional trait for classification. In this study, we performed an experiment of stepwise organic amendments in triplicate anaerobic digesters. We found that high resource availability significantly favored microbial r-strategists such as Bacillus spp. Incremental resource availability heightened average rRNA operon copy number of microbial community, resulting in a strong, positive correlation (r>0.74, P<0.008). This study quantifies how resource availability manipulations influence microbial community composition and supports the idea that rRNA operon copy number is an ecologically meaningful trait which reflects resource availability.

Mesh:

Year:  2017        PMID: 28841202      PMCID: PMC5702740          DOI: 10.1038/ismej.2017.135

Source DB:  PubMed          Journal:  ISME J        ISSN: 1751-7362            Impact factor:   10.302


  19 in total

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Authors:  S Chen; E M Zamudio Cañas; Y Zhang; Z Zhu; Q He
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Review 5.  Methanosarcina: the rediscovered methanogen for heavy duty biomethanation.

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Authors:  Kerry S Smith; Cheryl Ingram-Smith
Journal:  Trends Microbiol       Date:  2007-02-21       Impact factor: 17.079

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Authors:  Franciska T de Vries; Ashley Shade
Journal:  Front Microbiol       Date:  2013-09-05       Impact factor: 5.640

9.  Exploiting rRNA operon copy number to investigate bacterial reproductive strategies.

Authors:  Benjamin R K Roller; Steven F Stoddard; Thomas M Schmidt
Journal:  Nat Microbiol       Date:  2016-09-12       Impact factor: 17.745

10.  Decreases in average bacterial community rRNA operon copy number during succession.

Authors:  Diana R Nemergut; Joseph E Knelman; Scott Ferrenberg; Teresa Bilinski; Brett Melbourne; Lin Jiang; Cyrille Violle; John L Darcy; Tiffany Prest; Steven K Schmidt; Alan R Townsend
Journal:  ISME J       Date:  2015-11-13       Impact factor: 10.302

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  9 in total

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Journal:  Nat Microbiol       Date:  2019-05-13       Impact factor: 17.745

3.  Progressive Microbial Community Networks with Incremental Organic Loading Rates Underlie Higher Anaerobic Digestion Performance.

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7.  Long-term nitrogen deposition enhances microbial capacities in soil carbon stabilization but reduces network complexity.

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  9 in total

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