Literature DB >> 28834153

Transcript-level expression control of plant NLR genes.

Yan Lai1,2, Thomas Eulgem1.   

Abstract

Plant NLR genes encode sensitive immune receptors that can mediate the specific recognition of pathogen avirulence effectors and activate a strong defence response, termed effector-triggered immunity. The expression of NLRs requires strict regulation, as their ability to trigger immunity is dependent on their dose, and overexpression of NLRs results in autoimmunity and massive fitness costs. An elaborate interplay of different mechanisms controlling NLR transcript levels allows plants to maximize their defence capacity, whilst limiting negative impact on their fitness. Global suppression of NLR transcripts may be a prerequisite for the fast evolution of new NLR variants and the expansion of this gene family. Here, we summarize recent progress made towards a comprehensive understanding of NLR transcript-level expression control. Multiple mechanistic steps, including transcription as well as co-/post-transcriptional processing and transcript turn-over, contribute to balanced base levels of NLR transcripts and allow for dynamic adjustments to defence situations.
© 2017 BSPP AND JOHN WILEY & SONS LTD.

Entities:  

Keywords:  alternative polyadenylation; alternative splicing; nonsense-mediated decay; plant disease resistance genes; post-transcriptional regulation; small RNAs; transcriptional regulation

Mesh:

Substances:

Year:  2017        PMID: 28834153      PMCID: PMC6638128          DOI: 10.1111/mpp.12607

Source DB:  PubMed          Journal:  Mol Plant Pathol        ISSN: 1364-3703            Impact factor:   5.663


  169 in total

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3.  Pronounced intraspecific haplotype divergence at the RPP5 complex disease resistance locus of Arabidopsis.

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Journal:  Plant Cell       Date:  1999-11       Impact factor: 11.277

4.  Arabidopsis RPP4 is a member of the RPP5 multigene family of TIR-NB-LRR genes and confers downy mildew resistance through multiple signalling components.

Authors:  Erik A van der Biezen; Cecilie T Freddie; Katherine Kahn; Jane E Parker; Jonathan D G Jones
Journal:  Plant J       Date:  2002-02       Impact factor: 6.417

5.  The MLA6 coiled-coil, NBS-LRR protein confers AvrMla6-dependent resistance specificity to Blumeria graminis f. sp. hordei in barley and wheat.

Authors:  D Halterman; F Zhou; F Wei; R P Wise; P Schulze-Lefert
Journal:  Plant J       Date:  2001-02       Impact factor: 6.417

6.  The Arabidopsis RPS4 bacterial-resistance gene is a member of the TIR-NBS-LRR family of disease-resistance genes.

Authors:  W Gassmann; M E Hinsch; B J Staskawicz
Journal:  Plant J       Date:  1999-11       Impact factor: 6.417

7.  Epigenetic variation in Arabidopsis disease resistance.

Authors:  Trevor L Stokes; Barbara N Kunkel; Eric J Richards
Journal:  Genes Dev       Date:  2002-01-15       Impact factor: 11.361

8.  Alternatively spliced N resistance gene transcripts: their possible role in tobacco mosaic virus resistance.

Authors:  S P Dinesh-Kumar; B J Baker
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-15       Impact factor: 11.205

9.  Downy mildew (Peronospora parasitica) resistance genes in Arabidopsis vary in functional requirements for NDR1, EDS1, NPR1 and salicylic acid accumulation.

Authors:  J M McDowell; A Cuzick; C Can; J Beynon; J L Dangl; E B Holub
Journal:  Plant J       Date:  2000-06       Impact factor: 6.417

Review 10.  Importin-beta-like nuclear transport receptors.

Authors:  A C Ström; K Weis
Journal:  Genome Biol       Date:  2001-06-05       Impact factor: 13.583

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  30 in total

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4.  Widespread premature transcription termination of Arabidopsis thaliana NLR genes by the spen protein FPA.

Authors:  Matthew T Parker; Katarzyna Knop; Vasiliki Zacharaki; Anna V Sherwood; Daniel Tomé; Xuhong Yu; Pascal Gp Martin; Jim Beynon; Scott D Michaels; Geoffrey J Barton; Gordon G Simpson
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5.  A cluster of atypical resistance genes in soybean confers broad-spectrum antiviral activity.

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6.  De novo genome assembly and in natura epigenomics reveal salinity-induced DNA methylation in the mangrove tree Bruguiera gymnorhiza.

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7.  Pathogen-Associated Molecular Pattern-Triggered Immunity Involves Proteolytic Degradation of Core Nonsense-Mediated mRNA Decay Factors During the Early Defense Response.

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Review 9.  Plant NLR diversity: the known unknowns of pan-NLRomes.

Authors:  A Cristina Barragan; Detlef Weigel
Journal:  Plant Cell       Date:  2021-05-31       Impact factor: 12.085

10.  Resistant and susceptible responses in alfalfa (Medicago sativa) to bacterial stem blight caused by Pseudomonas syringae pv. syringae.

Authors:  Lev G Nemchinov; Jonathan Shao; Maya N Lee; Olga A Postnikova; Deborah A Samac
Journal:  PLoS One       Date:  2017-12-15       Impact factor: 3.240

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