Literature DB >> 28820319

A-to-I RNA editing - thinking beyond the single nucleotide.

Nabeel S Ganem1, Ayelet T Lamm1.   

Abstract

Adenosine-to-inosine RNA editing is a conserved process, which is performed by ADAR enzymes. By changing nucleotides in coding regions of genes and altering codons, ADARs expand the cell's protein repertoire. This function of the ADAR enzymes is essential for human brain development. However, most of the known editing sites are in non-coding repetitive regions in the transcriptome and the purpose of editing in these regions is unclear. Recent studies, which have shown that editing levels of transcripts vary between tissues and developmental stages in many organisms, suggest that the targeted RNA and ADAR editing are both regulated. We discuss the implications of these findings, and the possible role of RNA editing in innate immunity.

Entities:  

Keywords:  ADAR; Dicer; RNAi; dsRNA; non-coding RNA

Mesh:

Substances:

Year:  2017        PMID: 28820319      PMCID: PMC5731795          DOI: 10.1080/15476286.2017.1364830

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  63 in total

1.  Mutations in RNAi rescue aberrant chemotaxis of ADAR mutants.

Authors:  Leath A Tonkin; Brenda L Bass
Journal:  Science       Date:  2003-12-05       Impact factor: 47.728

Review 2.  RNA Editing: A Contributor to Neuronal Dynamics in the Mammalian Brain.

Authors:  Mikaela Behm; Marie Öhman
Journal:  Trends Genet       Date:  2016-01-20       Impact factor: 11.639

3.  RNA-regulated interaction of transportin-1 and exportin-5 with the double-stranded RNA-binding domain regulates nucleocytoplasmic shuttling of ADAR1.

Authors:  Jutta Fritz; Alexander Strehblow; Andreas Taschner; Sandy Schopoff; Pawel Pasierbek; Michael F Jantsch
Journal:  Mol Cell Biol       Date:  2009-01-05       Impact factor: 4.272

Review 4.  ADARs: viruses and innate immunity.

Authors:  Charles E Samuel
Journal:  Curr Top Microbiol Immunol       Date:  2012       Impact factor: 4.291

5.  Positive correlation between ADAR expression and its targets suggests a complex regulation mediated by RNA editing in the human brain.

Authors:  Noa Liscovitch; Lily Bazak; Erez Y Levanon; Gal Chechik
Journal:  RNA Biol       Date:  2014       Impact factor: 4.652

6.  Distinct roles for RDE-1 and RDE-4 during RNA interference in Caenorhabditis elegans.

Authors:  S Parrish; A Fire
Journal:  RNA       Date:  2001-10       Impact factor: 4.942

Review 7.  ADAR1, inosine and the immune sensing system: distinguishing self from non-self.

Authors:  Brian J Liddicoat; Alistair M Chalk; Carl R Walkley
Journal:  Wiley Interdiscip Rev RNA       Date:  2015-12-21       Impact factor: 9.957

8.  C. elegans and H. sapiens mRNAs with edited 3' UTRs are present on polysomes.

Authors:  Heather A Hundley; Ammie A Krauchuk; Brenda L Bass
Journal:  RNA       Date:  2008-08-21       Impact factor: 4.942

9.  Systematic identification of edited microRNAs in the human brain.

Authors:  Shahar Alon; Eyal Mor; Francois Vigneault; George M Church; Franco Locatelli; Federica Galeano; Angela Gallo; Noam Shomron; Eli Eisenberg
Journal:  Genome Res       Date:  2012-04-12       Impact factor: 9.043

10.  The RNA-editing enzyme ADAR1 controls innate immune responses to RNA.

Authors:  Niamh M Mannion; Sam M Greenwood; Robert Young; Sarah Cox; James Brindle; David Read; Christoffer Nellåker; Cornelia Vesely; Chris P Ponting; Paul J McLaughlin; Michael F Jantsch; Julia Dorin; Ian R Adams; A D J Scadden; Marie Ohman; Liam P Keegan; Mary A O'Connell
Journal:  Cell Rep       Date:  2014-11-13       Impact factor: 9.423

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  3 in total

Review 1.  RNA Epigenetics: Fine-Tuning Chromatin Plasticity and Transcriptional Regulation, and the Implications in Human Diseases.

Authors:  Amber Willbanks; Shaun Wood; Jason X Cheng
Journal:  Genes (Basel)       Date:  2021-04-22       Impact factor: 4.096

2.  Disruption in A-to-I Editing Levels Affects C. elegans Development More Than a Complete Lack of Editing.

Authors:  Nabeel S Ganem; Noa Ben-Asher; Aidan C Manning; Sarah N Deffit; Michael C Washburn; Emily C Wheeler; Gene W Yeo; Orna Ben-Naim Zgayer; Einav Mantsur; Heather A Hundley; Ayelet T Lamm
Journal:  Cell Rep       Date:  2019-04-23       Impact factor: 9.423

Review 3.  RNA modifications: importance in immune cell biology and related diseases.

Authors:  Lian Cui; Rui Ma; Jiangluyi Cai; Chunyuan Guo; Zeyu Chen; Lingling Yao; Yuanyuan Wang; Rui Fan; Xin Wang; Yuling Shi
Journal:  Signal Transduct Target Ther       Date:  2022-09-22
  3 in total

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