Literature DB >> 28781990

The Microphysiology Systems Database for Analyzing and Modeling Compound Interactions with Human and Animal Organ Models.

Albert Gough1,2, Lawrence Vernetti1,2, Luke Bergenthal1, Tong Ying Shun1, D Lansing Taylor1,2,3.   

Abstract

Microfluidic human organ models, microphysiology systems (MPS), are currently being developed as predictive models of drug safety and efficacy in humans. To design and validate MPS as predictive of human safety liabilities requires safety data for a reference set of compounds, combined with in vitro data from the human organ models. To address this need, we have developed an internet database, the MPS database (MPS-Db), as a powerful platform for experimental design, data management, and analysis, and to combine experimental data with reference data, to enable computational modeling. The present study demonstrates the capability of the MPS-Db in early safety testing using a human liver MPS to relate the effects of tolcapone and entacapone in the in vitro model to human in vivo effects. These two compounds were chosen to be evaluated as a representative pair of marketed drugs because they are structurally similar, have the same target, and were found safe or had an acceptable risk in preclinical and clinical trials, yet tolcapone induced unacceptable levels of hepatotoxicity while entacapone was found to be safe. Results demonstrate the utility of the MPS-Db as an essential resource for relating in vitro organ model data to the multiple biochemical, preclinical, and clinical data sources on in vivo drug effects.

Entities:  

Keywords:  computational toxicology; high throughput; in vitro methods; liver; multi-organ models

Year:  2016        PMID: 28781990      PMCID: PMC5119471          DOI: 10.1089/aivt.2016.0011

Source DB:  PubMed          Journal:  Appl In Vitro Toxicol        ISSN: 2332-1512


  40 in total

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Review 2.  Liver enzyme alteration: a guide for clinicians.

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3.  BDDCS applied to over 900 drugs.

Authors:  Leslie Z Benet; Fabio Broccatelli; Tudor I Oprea
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Review 4.  Lost in translation: animal models and clinical trials in cancer treatment.

Authors:  Isabella Wy Mak; Nathan Evaniew; Michelle Ghert
Journal:  Am J Transl Res       Date:  2014-01-15       Impact factor: 4.060

5.  National Ambulatory Medical Care Survey: 2007 summary.

Authors:  Chun-Ju Hsiao; Donald K Cherry; Paul C Beatty; Elizabeth A Rechtsteiner
Journal:  Natl Health Stat Report       Date:  2010-11-03

Review 6.  Organs-on-chips at the frontiers of drug discovery.

Authors:  Eric W Esch; Anthony Bahinski; Dongeun Huh
Journal:  Nat Rev Drug Discov       Date:  2015-03-20       Impact factor: 84.694

Review 7.  Species differences between mouse, rat, dog, monkey and human CYP-mediated drug metabolism, inhibition and induction.

Authors:  Marcella Martignoni; Geny M M Groothuis; Ruben de Kanter
Journal:  Expert Opin Drug Metab Toxicol       Date:  2006-12       Impact factor: 4.481

8.  Approaching the in vitro clinical trial: engineering organs on chips.

Authors:  A K Capulli; K Tian; N Mehandru; A Bukhta; S F Choudhury; M Suchyta; K K Parker
Journal:  Lab Chip       Date:  2014-09-07       Impact factor: 6.799

9.  DrugBank: a comprehensive resource for in silico drug discovery and exploration.

Authors:  David S Wishart; Craig Knox; An Chi Guo; Savita Shrivastava; Murtaza Hassanali; Paul Stothard; Zhan Chang; Jennifer Woolsey
Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

10.  PubChem BioAssay: 2014 update.

Authors:  Yanli Wang; Tugba Suzek; Jian Zhang; Jiyao Wang; Siqian He; Tiejun Cheng; Benjamin A Shoemaker; Asta Gindulyte; Stephen H Bryant
Journal:  Nucleic Acids Res       Date:  2013-11-05       Impact factor: 16.971

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  10 in total

1.  A glass-based, continuously zonated and vascularized human liver acinus microphysiological system (vLAMPS) designed for experimental modeling of diseases and ADME/TOX.

Authors:  Xiang Li; Subin M George; Lawrence Vernetti; Albert H Gough; D Lansing Taylor
Journal:  Lab Chip       Date:  2018-08-21       Impact factor: 6.799

2.  Harnessing Human Microphysiology Systems as Key Experimental Models for Quantitative Systems Pharmacology.

Authors:  D Lansing Taylor; Albert Gough; Mark E Schurdak; Lawrence Vernetti; Chakra S Chennubhotla; Daniel Lefever; Fen Pei; James R Faeder; Timothy R Lezon; Andrew M Stern; Ivet Bahar
Journal:  Handb Exp Pharmacol       Date:  2019

Review 3.  Liver 'organ on a chip'.

Authors:  Colin H Beckwitt; Amanda M Clark; Sarah Wheeler; D Lansing Taylor; Donna B Stolz; Linda Griffith; Alan Wells
Journal:  Exp Cell Res       Date:  2017-12-29       Impact factor: 3.905

Review 4.  Pre-clinical and clinical investigations of metabolic zonation in liver diseases: The potential of microphysiology systems.

Authors:  Alejandro Soto-Gutierrez; Albert Gough; Lawrence A Vernetti; D L Taylor; Satdarshan P Monga
Journal:  Exp Biol Med (Maywood)       Date:  2017-05-03

5.  Analysis of reproducibility and robustness of a human microfluidic four-cell liver acinus microphysiology system (LAMPS).

Authors:  Courtney Sakolish; Celeste E Reese; Yu-Syuan Luo; Alan Valdiviezo; Mark E Schurdak; Albert Gough; D Lansing Taylor; Weihsueh A Chiu; Lawrence A Vernetti; Ivan Rusyn
Journal:  Toxicology       Date:  2020-12-08       Impact factor: 4.221

Review 6.  Microphysiological systems: What it takes for community adoption.

Authors:  Passley Hargrove-Grimes; Lucie A Low; Danilo A Tagle
Journal:  Exp Biol Med (Maywood)       Date:  2021-04-25

Review 7.  Human biomimetic liver microphysiology systems in drug development and precision medicine.

Authors:  Albert Gough; Alejandro Soto-Gutierrez; Lawrence Vernetti; Mo R Ebrahimkhani; Andrew M Stern; D Lansing Taylor
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2020-12-17       Impact factor: 73.082

8.  Functional Coupling of Human Microphysiology Systems: Intestine, Liver, Kidney Proximal Tubule, Blood-Brain Barrier and Skeletal Muscle.

Authors:  Lawrence Vernetti; Albert Gough; Nicholas Baetz; Sarah Blutt; James R Broughman; Jacquelyn A Brown; Jennifer Foulke-Abel; Nesrin Hasan; Julie In; Edward Kelly; Olga Kovbasnjuk; Jonathan Repper; Nina Senutovitch; Janet Stabb; Catherine Yeung; Nick C Zachos; Mark Donowitz; Mary Estes; Jonathan Himmelfarb; George Truskey; John P Wikswo; D Lansing Taylor
Journal:  Sci Rep       Date:  2017-02-08       Impact factor: 4.379

Review 9.  Human Organ-on-a-Chip Microphysiological Systems to Model Musculoskeletal Pathologies and Accelerate Therapeutic Discovery.

Authors:  Raquel E Ajalik; Rahul G Alenchery; John S Cognetti; Victor Z Zhang; James L McGrath; Benjamin L Miller; Hani A Awad
Journal:  Front Bioeng Biotechnol       Date:  2022-03-14

10.  Applications of the microphysiology systems database for experimental ADME-Tox and disease models.

Authors:  Mark Schurdak; Lawrence Vernetti; Luke Bergenthal; Quinn K Wolter; Tong Ying Shun; Sandra Karcher; D Lansing Taylor; Albert Gough
Journal:  Lab Chip       Date:  2020-04-14       Impact factor: 6.799

  10 in total

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