Literature DB >> 28781430

Accounting for tissue heterogeneity in infrared spectroscopic imaging for accurate diagnosis of thyroid carcinoma subtypes.

David Martinez-Marin1, Hari Sreedhar1, Vishal K Varma2, Catarina Eloy3, Manuel Sobrinho-Simões3, André Kajdacsy-Balla1, Michael J Walsh1,2.   

Abstract

Fourier transform infrared (FT-IR) microscopy was used to image tissue samples from twenty patients diagnosed with thyroid carcinoma. The spectral data were then used to differentiate between follicular thyroid carcinoma and follicular variant of papillary thyroid carcinoma using principle component analysis coupled with linear discriminant analysis and a Naïve Bayesian classifier operating on a set of computed spectral metrics. Classification of patients' disease type was accomplished by using average spectra from a wide region containing follicular cells, colloid, and fibrosis; however, classification of disease state at the pixel level was only possible when the extracted spectra were limited to follicular epithelial cells in the samples, excluding the relatively uninformative areas of fibrosis. The results demonstrate the potential of FT-IR microscopy as a tool to assist in the difficult diagnosis of these subtypes of thyroid cancer, and also highlights the importance of selectively and separately analyzing spectral information from different features of a tissue of interest.

Entities:  

Keywords:  Fourier transform infrared microscopy; Thyroid carcinoma

Year:  2016        PMID: 28781430      PMCID: PMC5542415          DOI: 10.1016/j.vibspec.2016.09.014

Source DB:  PubMed          Journal:  Vib Spectrosc        ISSN: 0924-2031            Impact factor:   2.507


  13 in total

1.  Follicular variant of papillary carcinoma: the diagnostic limitations of preoperative fine-needle aspiration and intraoperative frozen section evaluation.

Authors:  H S Lin; A Komisar; E Opher; S M Blaugrund
Journal:  Laryngoscope       Date:  2000-09       Impact factor: 3.325

Review 2.  Biospectroscopy to metabolically profile biomolecular structure: a multistage approach linking computational analysis with biomarkers.

Authors:  Jemma G Kelly; Jülio Trevisan; Andrew D Scott; Paul L Carmichael; Hubert M Pollock; Pierre L Martin-Hirsch; Francis L Martin
Journal:  J Proteome Res       Date:  2011-02-11       Impact factor: 4.466

3.  Infrared spectroscopic imaging for histopathologic recognition.

Authors:  Daniel C Fernandez; Rohit Bhargava; Stephen M Hewitt; Ira W Levin
Journal:  Nat Biotechnol       Date:  2005-03-27       Impact factor: 54.908

4.  European consensus for the management of patients with differentiated thyroid carcinoma of the follicular epithelium.

Authors:  Furio Pacini; Martin Schlumberger; Henning Dralle; Rossella Elisei; Johannes W A Smit; Wilmar Wiersinga
Journal:  Eur J Endocrinol       Date:  2006-06       Impact factor: 6.664

5.  The characterization of normal thyroid tissue by micro-FTIR spectroscopy.

Authors:  Thiago M Pereira; Denise M Zezell; Benjamin Bird; Milos Miljković; Max Diem
Journal:  Analyst       Date:  2013-12-07       Impact factor: 4.616

6.  Nomenclature Revision for Encapsulated Follicular Variant of Papillary Thyroid Carcinoma: A Paradigm Shift to Reduce Overtreatment of Indolent Tumors.

Authors:  Yuri E Nikiforov; Raja R Seethala; Giovanni Tallini; Zubair W Baloch; Fulvio Basolo; Lester D R Thompson; Justine A Barletta; Bruce M Wenig; Abir Al Ghuzlan; Kennichi Kakudo; Thomas J Giordano; Venancio A Alves; Elham Khanafshar; Sylvia L Asa; Adel K El-Naggar; William E Gooding; Steven P Hodak; Ricardo V Lloyd; Guy Maytal; Ozgur Mete; Marina N Nikiforova; Vania Nosé; Mauro Papotti; David N Poller; Peter M Sadow; Arthur S Tischler; R Michael Tuttle; Kathryn B Wall; Virginia A LiVolsi; Gregory W Randolph; Ronald A Ghossein
Journal:  JAMA Oncol       Date:  2016-08-01       Impact factor: 31.777

7.  Observer variation in the diagnosis of follicular variant of papillary thyroid carcinoma.

Authors:  Ricardo V Lloyd; Lori A Erickson; Mary B Casey; King Y Lam; Christine M Lohse; Sylvia L Asa; John K C Chan; Ronald A DeLellis; H Ruben Harach; Kennichi Kakudo; Virginia A LiVolsi; Juan Rosai; Thomas J Sebo; Manuel Sobrinho-Simoes; Bruce M Wenig; Marick E Lae
Journal:  Am J Surg Pathol       Date:  2004-10       Impact factor: 6.394

8.  [FTIR spectroscopic explorations of freshly resected thyroid malignant tissues].

Authors:  Xiang-tai Zeng; Yi-zhuang Xu; Xiao-qing Zhang; Zhi Xu; Yuan-fu Zhang; Jin-guang Wu; Xiao-si Zhou; Xiao-feng Ling
Journal:  Guang Pu Xue Yu Guang Pu Fen Xi       Date:  2007-12       Impact factor: 0.589

9.  Distinguishing classical papillary thyroid microcancers from follicular-variant microcancers.

Authors:  Surbhi Singhal; Rebecca S Sippel; Herbert Chen; David F Schneider
Journal:  J Surg Res       Date:  2014-03-19       Impact factor: 2.192

10.  Using Fourier transform IR spectroscopy to analyze biological materials.

Authors:  Matthew J Baker; Júlio Trevisan; Paul Bassan; Rohit Bhargava; Holly J Butler; Konrad M Dorling; Peter R Fielden; Simon W Fogarty; Nigel J Fullwood; Kelly A Heys; Caryn Hughes; Peter Lasch; Pierre L Martin-Hirsch; Blessing Obinaju; Ganesh D Sockalingum; Josep Sulé-Suso; Rebecca J Strong; Michael J Walsh; Bayden R Wood; Peter Gardner; Francis L Martin
Journal:  Nat Protoc       Date:  2014-07-03       Impact factor: 13.491

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  4 in total

1.  Discrimination of malignant from benign thyroid lesions through neural networks using FTIR signals obtained from tissues.

Authors:  Abegail Santillan; Rock Christian Tomas; Ruth Bangaoil; Rolando Lopez; Maria Honolina Gomez; Allan Fellizar; Antonio Lim; Lorenzo Abanilla; Maria Cristina Ramos; Leonardo Guevarra; Pia Marie Albano
Journal:  Anal Bioanal Chem       Date:  2021-02-10       Impact factor: 4.142

Review 2.  Infrared spectroscopic imaging: Label-free biochemical analysis of stroma and tissue fibrosis.

Authors:  Shaiju S Nazeer; Hari Sreedhar; Vishal K Varma; David Martinez-Marin; Christine Massie; Michael J Walsh
Journal:  Int J Biochem Cell Biol       Date:  2017-09-06       Impact factor: 5.085

3.  Application Value of Color Doppler Ultrasonography Combined with Thyroid Autoantibody Tests in Early Diagnosis of Thyroid Cancer.

Authors:  Danlin Song; Fajin Dong; Jing Zheng; Hui Luo; Jinxi Wei
Journal:  Comput Math Methods Med       Date:  2022-04-27       Impact factor: 2.809

Review 4.  Metabolic Profile Characterization of Different Thyroid Nodules Using FTIR Spectroscopy: A Review.

Authors:  Vanessa Neto; Sara Esteves-Ferreira; Isabel Inácio; Márcia Alves; Rosa Dantas; Idália Almeida; Joana Guimarães; Teresa Azevedo; Alexandra Nunes
Journal:  Metabolites       Date:  2022-01-08
  4 in total

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