Literature DB >> 28780704

Regulatory components of carbon concentrating mechanisms in aquatic unicellular photosynthetic organisms.

Vandana Tomar1, Gurpreet Kaur Sidhu1, Panchsheela Nogia1, Rajesh Mehrotra1, Sandhya Mehrotra2.   

Abstract

This review provides an insight into the regulation of the carbon concentrating mechanisms (CCMs) in lower organisms like cyanobacteria, proteobacteria, and algae. CCMs evolved as a mechanism to concentrate CO2 at the site of primary carboxylating enzyme Ribulose-1, 5-bisphosphate carboxylase oxygenase (Rubisco), so that the enzyme could overcome its affinity towards O2 which leads to wasteful processes like photorespiration. A diverse set of CCMs exist in nature, i.e., carboxysomes in cyanobacteria and proteobacteria; pyrenoids in algae and diatoms, the C4 system, and Crassulacean acid metabolism in higher plants. Prime regulators of CCM in most of the photosynthetic autotrophs belong to the LysR family of transcriptional regulators, which regulate the activity of the components of CCM depending upon the ambient CO2 concentrations. Major targets of these regulators are carbonic anhydrase and inorganic carbon uptake systems (CO2 and HCO3- transporters) whose activities are modulated either at transcriptional level or by changes in the levels of their co-regulatory metabolites. The article provides information on the localization of the CCM components as well as their function and participation in the development of an efficient CCM. Signal transduction cascades leading to activation/inactivation of inducible CCM components on perception of low/high CO2 stimuli have also been brought into picture. A detailed study of the regulatory components can aid in identifying the unraveled aspects of these mechanisms and hence provide information on key molecules that need to be explored to further provide a clear understanding of the mechanism under study.

Entities:  

Keywords:  Algae; Carbon concentrating mechanisms; CbbR; CcmR; CmpR; Cyanobacteria; Diatoms; Proteobacteria

Mesh:

Substances:

Year:  2017        PMID: 28780704     DOI: 10.1007/s00299-017-2191-3

Source DB:  PubMed          Journal:  Plant Cell Rep        ISSN: 0721-7714            Impact factor:   4.570


  115 in total

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Authors:  Yoichi Yoshizawa; Koichi Toyoda; Hiroyuki Arai; Masaharu Ishii; Yasuo Igarashi
Journal:  J Bacteriol       Date:  2004-09       Impact factor: 3.490

2.  CO2 CONCENTRATING MECHANISMS IN PHOTOSYNTHETIC MICROORGANISMS.

Authors:  Aaron Kaplan; Leonora Reinhold
Journal:  Annu Rev Plant Physiol Plant Mol Biol       Date:  1999-06

3.  Expression activation and functional analysis of HLA3, a putative inorganic carbon transporter in Chlamydomonas reinhardtii.

Authors:  Han Gao; Yingjun Wang; Xiaowen Fei; David A Wright; Martin H Spalding
Journal:  Plant J       Date:  2015-04       Impact factor: 6.417

4.  An inorganic carbon transport system responsible for acclimation specific to air levels of CO2 in Chlamydomonas reinhardtii.

Authors:  Yingjun Wang; Martin H Spalding
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-15       Impact factor: 11.205

5.  Transcriptional response of the sulfur chemolithoautotroph Thiomicrospira crunogena to dissolved inorganic carbon limitation.

Authors:  Kimberly P Dobrinski; Steven A Enkemann; Sean J Yoder; Edward Haller; Kathleen M Scott
Journal:  J Bacteriol       Date:  2012-02-10       Impact factor: 3.490

Review 6.  Regulators of nonsulfur purple phototrophic bacteria and the interactive control of CO2 assimilation, nitrogen fixation, hydrogen metabolism and energy generation.

Authors:  James M Dubbs; F Robert Tabita
Journal:  FEMS Microbiol Rev       Date:  2004-06       Impact factor: 16.408

7.  Photosynthetic electron transport involved in PxcA-dependent proton extrusion in Synechocystis sp. Strain PCC6803: effect of pxcA inactivation on CO2, HCO3-, and NO3- uptake.

Authors:  M Sonoda; H Katoh; W Vermaas; G Schmetterer; T Ogawa
Journal:  J Bacteriol       Date:  1998-08       Impact factor: 3.490

8.  Knockdown of limiting-CO2-induced gene HLA3 decreases HCO3- transport and photosynthetic Ci affinity in Chlamydomonas reinhardtii.

Authors:  Deqiang Duanmu; Amy R Miller; Kempton M Horken; Donald P Weeks; Martin H Spalding
Journal:  Proc Natl Acad Sci U S A       Date:  2009-03-24       Impact factor: 11.205

9.  Dynamics of carbon-concentrating mechanism induction and protein relocalization during the dark-to-light transition in synchronized Chlamydomonas reinhardtii.

Authors:  Madeline C Mitchell; Moritz T Meyer; Howard Griffiths
Journal:  Plant Physiol       Date:  2014-08-08       Impact factor: 8.340

10.  A model for carbohydrate metabolism in the diatom Phaeodactylum tricornutum deduced from comparative whole genome analysis.

Authors:  Peter G Kroth; Anthony Chiovitti; Ansgar Gruber; Veronique Martin-Jezequel; Thomas Mock; Micaela Schnitzler Parker; Michele S Stanley; Aaron Kaplan; Lise Caron; Till Weber; Uma Maheswari; E Virginia Armbrust; Chris Bowler
Journal:  PLoS One       Date:  2008-01-09       Impact factor: 3.240

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  5 in total

Review 1.  Diatom Molecular Research Comes of Age: Model Species for Studying Phytoplankton Biology and Diversity.

Authors:  Angela Falciatore; Marianne Jaubert; Jean-Pierre Bouly; Benjamin Bailleul; Thomas Mock
Journal:  Plant Cell       Date:  2019-12-18       Impact factor: 11.277

2.  Patterning of the Autotrophic, Mixotrophic, and Heterotrophic Proteomes of Oxygen-Evolving Cyanobacterium Synechocystis sp. PCC 6803.

Authors:  Dorota Muth-Pawlak; Sanna Kreula; Peter J Gollan; Tuomas Huokko; Yagut Allahverdiyeva; Eva-Mari Aro
Journal:  Front Microbiol       Date:  2022-05-25       Impact factor: 6.064

Review 3.  Recent Progress on Systems and Synthetic Biology of Diatoms for Improving Algal Productivity.

Authors:  Jiwei Chen; Yifan Huang; Yuexuan Shu; Xiaoyue Hu; Di Wu; Hangjin Jiang; Kui Wang; Weihua Liu; Weiqi Fu
Journal:  Front Bioeng Biotechnol       Date:  2022-05-13

4.  Carbonic Anhydrases and Metabolism.

Authors:  Claudiu T Supuran
Journal:  Metabolites       Date:  2018-03-21

Review 5.  α-CAs from Photosynthetic Organisms.

Authors:  Emma Langella; Anna Di Fiore; Vincenzo Alterio; Simona Maria Monti; Giuseppina De Simone; Katia D'Ambrosio
Journal:  Int J Mol Sci       Date:  2022-10-10       Impact factor: 6.208

  5 in total

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