Literature DB >> 28768416

Manganese and Cobalt in the Nonheme-Metal-Binding Site of a Biosynthetic Model of Heme-Copper Oxidase Superfamily Confer Oxidase Activity through Redox-Inactive Mechanism.

Julian H Reed, Yelu Shi1, Qianhong Zhu2, Saumen Chakraborty3, Evan N Mirts, Igor D Petrik, Ambika Bhagi-Damodaran4, Matthew Ross5, Pierre Moënne-Loccoz2, Yong Zhang1, Yi Lu.   

Abstract

The presence of a nonheme metal, such as copper and iron, in the heme-copper oxidase (HCO) superfamily is critical to the enzymatic activity of reducing O2 to H2O, but the exact mechanism the nonheme metal ion uses to confer and fine-tune the activity remains to be understood. We herein report that manganese and cobalt can bind to the same nonheme site and confer HCO activity in a heme-nonheme biosynthetic model in myoglobin. While the initial rates of O2 reduction by the Mn, Fe, and Co derivatives are similar, the percentages of reactive oxygen species (ROS) formation are 7%, 4%, and 1% and the total turnovers are 5.1 ± 1.1, 13.4 ± 0.7, and 82.5 ± 2.5, respectively. These results correlate with the trends of nonheme-metal-binding dissociation constants (35, 22, and 9 μM) closely, suggesting that tighter metal binding can prevent ROS release from the active site, lessen damage to the protein, and produce higher total turnover numbers. Detailed spectroscopic, electrochemical, and computational studies found no evidence of redox cycling of manganese or cobalt in the enzymatic reactions and suggest that structural and electronic effects related to the presence of different nonheme metals lead to the observed differences in reactivity. This study of the roles of nonheme metal ions beyond the Cu and Fe found in native enzymes has provided deeper insights into nature's choice of metal ion and reaction mechanism and allows for finer control of the enzymatic activity, which is a basis for the design of efficient catalysts for the oxygen reduction reaction in fuel cells.

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Year:  2017        PMID: 28768416      PMCID: PMC5673108          DOI: 10.1021/jacs.7b05800

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  74 in total

Review 1.  Mechanism of proton translocation by cytochrome c oxidase: a new four-stroke histidine cycle.

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Journal:  Biochim Biophys Acta       Date:  2000-05-12

2.  XANES investigation of the Co oxidation state in solution and in cancer cells treated with Co(III) complexes.

Authors:  Paul D Bonnitcha; Matthew D Hall; Clare K Underwood; Garry J Foran; Mei Zhang; Philip J Beale; Trevor W Hambley
Journal:  J Inorg Biochem       Date:  2006-03-03       Impact factor: 4.155

Review 3.  Dioxygen activation for the self-degradation of heme: reaction mechanism and regulation of heme oxygenase.

Authors:  Toshitaka Matsui; Mari Iwasaki; Ryota Sugiyama; Masaki Unno; Masao Ikeda-Saito
Journal:  Inorg Chem       Date:  2010-04-19       Impact factor: 5.165

4.  Why copper is preferred over iron for oxygen activation and reduction in haem-copper oxidases.

Authors:  Ambika Bhagi-Damodaran; Matthew A Michael; Qianhong Zhu; Julian Reed; Braddock A Sandoval; Evan N Mirts; Saumen Chakraborty; Pierre Moënne-Loccoz; Yong Zhang; Yi Lu
Journal:  Nat Chem       Date:  2016-11-07       Impact factor: 24.427

5.  The mechanism of autooxidation of myoglobin.

Authors:  R E Brantley; S J Smerdon; A J Wilkinson; E W Singleton; J S Olson
Journal:  J Biol Chem       Date:  1993-04-05       Impact factor: 5.157

6.  De Novo Design of Metalloproteins and Metalloenzymes in a Three-Helix Bundle.

Authors:  Jefferson S Plegaria; Vincent L Pecoraro
Journal:  Methods Mol Biol       Date:  2016

7.  A functional nitric oxide reductase model.

Authors:  James P Collman; Ying Yang; Abhishek Dey; Richard A Decréau; Somdatta Ghosh; Takehiro Ohta; Edward I Solomon
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-06       Impact factor: 11.205

8.  O2 reduction by a functional heme/nonheme bis-iron NOR model complex.

Authors:  James P Collman; Abhishek Dey; Ying Yang; Somdatta Ghosh; Richard A Decréau
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-16       Impact factor: 11.205

9.  Critical structural role of R481 in cytochrome c oxidase from Rhodobacter sphaeroides.

Authors:  Tsuyoshi Egawa; Hyun Ju Lee; Robert B Gennis; Syun-Ru Yeh; Denis L Rousseau
Journal:  Biochim Biophys Acta       Date:  2009-05-20

10.  The production of nitrous oxide by the heme/nonheme diiron center of engineered myoglobins (Fe(B)Mbs) proceeds through a trans-iron-nitrosyl dimer.

Authors:  Hirotoshi Matsumura; Takahiro Hayashi; Saumen Chakraborty; Yi Lu; Pierre Moënne-Loccoz
Journal:  J Am Chem Soc       Date:  2014-02-03       Impact factor: 15.419

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  6 in total

1.  Nitric Oxide Reductase Activity in Heme-Nonheme Binuclear Engineered Myoglobins through a One-Electron Reduction Cycle.

Authors:  Sinan Sabuncu; Julian H Reed; Yi Lu; Pierre Moënne-Loccoz
Journal:  J Am Chem Soc       Date:  2018-12-06       Impact factor: 15.419

2.  Understanding and Modulating Metalloenzymes with Unnatural Amino Acids, Non-Native Metal Ions, and Non-Native Metallocofactors.

Authors:  Evan N Mirts; Ambika Bhagi-Damodaran; Yi Lu
Journal:  Acc Chem Res       Date:  2019-03-26       Impact factor: 22.384

Review 3.  Synthetic Fe/Cu Complexes: Toward Understanding Heme-Copper Oxidase Structure and Function.

Authors:  Suzanne M Adam; Gayan B Wijeratne; Patrick J Rogler; Daniel E Diaz; David A Quist; Jeffrey J Liu; Kenneth D Karlin
Journal:  Chem Rev       Date:  2018-10-29       Impact factor: 60.622

4.  An Engineered Glutamate in Biosynthetic Models of Heme-Copper Oxidases Drives Complete Product Selectivity by Tuning the Hydrogen-Bonding Network.

Authors:  Igor D Petrik; Roman Davydov; Maximilian Kahle; Braddock Sandoval; Sudharsan Dwaraknath; Pia Ädelroth; Brian Hoffman; Yi Lu
Journal:  Biochemistry       Date:  2021-01-19       Impact factor: 3.162

5.  Self-Assembled Naphthylidene-Containing Schiff Base Anchored Polystyrene Nanocomposites Targeted for Selective Cu(II) Ion Removal from Wastewater.

Authors:  Yamei Liu; Yao Feng; Ran Wang; Tifeng Jiao; Jinghong Li; Yandi Rao; Qingrui Zhang; Zhenhua Bai; Qiuming Peng
Journal:  ACS Omega       Date:  2019-07-12

Review 6.  Molecular understanding of heteronuclear active sites in heme-copper oxidases, nitric oxide reductases, and sulfite reductases through biomimetic modelling.

Authors:  Christopher J Reed; Quan N Lam; Evan N Mirts; Yi Lu
Journal:  Chem Soc Rev       Date:  2021-03-01       Impact factor: 54.564

  6 in total

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