Literature DB >> 28734132

High-dimensional single cell mapping of cerium distribution in the lung immune microenvironment of an active smoker.

Adeeb H Rahman1,2,3, Yonit Lavin2, Soma Kobayashi2, Andrew Leader2, Miriam Merad2,3,4.   

Abstract

BACKGROUND: Mass cytometry leverages inductively coupled mass spectrometry to perform high dimensional single cell analyses using antibodies tagged with rare earth isotopes that are considered to be largely absent in biological samples. We have recently noted an unusual exception to this rule while analyzing tissue samples from patients undergoing surgical resection for early stage lung cancer, and here we present a detailed cytometric characterization of cerium in a clinical patient sample.
METHODS: We performed a CyTOF analysis on cell suspensions derived from matched blood, tumor lesion, and non-involved lung tissue from an active smoker undergoing surgical resection for early stage lung adenocarcinoma. The samples were stained with a 31-parameter antibody panel to allow a detailed characterization of the cellular heterogeneity of the samples. The data were visualized using viSNE, major immune subsets were identified based on canonical marker expression patterns, and single cell cerium levels were evaluated across each of these defined subsets.
RESULTS: High dimensional immune cell mapping revealed that high levels of cerium were specifically associated with a phenotypically distinct subset of lung macrophages that were most prevalent in noninvolved lung tissue, whereas tumor associated macrophages showed relatively lower levels of cerium. We hypothesize that these findings reflect alveolar macrophage phagocytosis of inhaled cerium derived from cigarette flint lighters.
CONCLUSIONS: These results demonstrate the first high-dimensional single cell characterization of environmental metal exposure associated with smoking, and offer a demonstration of the unique potential for applying mass cytometry to the field of environmental toxicology.
© 2017 International Clinical Cytometry Society. © 2017 International Clinical Cytometry Society.

Entities:  

Keywords:  CyTOF; cancer; cerium; immune monitoring; immunology; immunophenotyping; lung; macrophage; mass cytometry; microenvironment

Mesh:

Substances:

Year:  2017        PMID: 28734132      PMCID: PMC6289862          DOI: 10.1002/cyto.b.21545

Source DB:  PubMed          Journal:  Cytometry B Clin Cytom        ISSN: 1552-4949            Impact factor:   3.058


  15 in total

1.  Identification of an autophagy defect in smokers' alveolar macrophages.

Authors:  Martha M Monick; Linda S Powers; Katherine Walters; Nina Lovan; Michael Zhang; Alicia Gerke; Sif Hansdottir; Gary W Hunninghake
Journal:  J Immunol       Date:  2010-10-04       Impact factor: 5.422

2.  Intra-alveolar macrophage numbers in current smokers and non-smokers: a morphometric study of tissue sections.

Authors:  W A Wallace; M Gillooly; D Lamb
Journal:  Thorax       Date:  1992-06       Impact factor: 9.139

3.  Innate Immune Landscape in Early Lung Adenocarcinoma by Paired Single-Cell Analyses.

Authors:  Yonit Lavin; Soma Kobayashi; Andrew Leader; El-Ad David Amir; Naama Elefant; Camille Bigenwald; Romain Remark; Robert Sweeney; Christian D Becker; Jacob H Levine; Klaus Meinhof; Andrew Chow; Seunghee Kim-Shulze; Andrea Wolf; Chiara Medaglia; Hanjie Li; Julie A Rytlewski; Ryan O Emerson; Alexander Solovyov; Benjamin D Greenbaum; Catherine Sanders; Marissa Vignali; Mary Beth Beasley; Raja Flores; Sacha Gnjatic; Dana Pe'er; Adeeb Rahman; Ido Amit; Miriam Merad
Journal:  Cell       Date:  2017-05-04       Impact factor: 41.582

4.  Metals transfer from tobacco to cigarette smoke: Evidences in smokers' lung tissue.

Authors:  Edgar Pinto; Mariana Cruz; Patrícia Ramos; Agostinho Santos; Agostinho Almeida
Journal:  J Hazard Mater       Date:  2016-11-27       Impact factor: 10.588

Review 5.  Metal based drugs: from serendipity to design.

Authors:  Simon Paul Fricker
Journal:  Dalton Trans       Date:  2007-09-19       Impact factor: 4.390

6.  Mass cytometry: technique for real time single cell multitarget immunoassay based on inductively coupled plasma time-of-flight mass spectrometry.

Authors:  Dmitry R Bandura; Vladimir I Baranov; Olga I Ornatsky; Alexei Antonov; Robert Kinach; Xudong Lou; Serguei Pavlov; Sergey Vorobiev; John E Dick; Scott D Tanner
Journal:  Anal Chem       Date:  2009-08-15       Impact factor: 6.986

7.  viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia.

Authors:  El-ad David Amir; Kara L Davis; Michelle D Tadmor; Erin F Simonds; Jacob H Levine; Sean C Bendall; Daniel K Shenfeld; Smita Krishnaswamy; Garry P Nolan; Dana Pe'er
Journal:  Nat Biotechnol       Date:  2013-05-19       Impact factor: 54.908

8.  Exposure to Cerium Oxide Nanoparticles Is Associated With Activation of Mitogen-activated Protein Kinases Signaling and Apoptosis in Rat Lungs.

Authors:  Kevin M Rice; Siva K Nalabotu; Nandini D P K Manne; Madhukar B Kolli; Geeta Nandyala; Ravikumar Arvapalli; Jane Y Ma; Eric R Blough
Journal:  J Prev Med Public Health       Date:  2015-05-18

9.  An Immune Atlas of Clear Cell Renal Cell Carcinoma.

Authors:  Stéphane Chevrier; Jacob Harrison Levine; Vito Riccardo Tomaso Zanotelli; Karina Silina; Daniel Schulz; Marina Bacac; Carola Hermine Ries; Laurie Ailles; Michael Alexander Spencer Jewett; Holger Moch; Maries van den Broek; Christian Beisel; Michael Beda Stadler; Craig Gedye; Bernhard Reis; Dana Pe'er; Bernd Bodenmiller
Journal:  Cell       Date:  2017-05-04       Impact factor: 41.582

10.  Cerium Oxide Nanoparticles in Lung Acutely Induce Oxidative Stress, Inflammation, and DNA Damage in Various Organs of Mice.

Authors:  Abderrahim Nemmar; Priya Yuvaraju; Sumaya Beegam; Mohamed A Fahim; Badreldin H Ali
Journal:  Oxid Med Cell Longev       Date:  2017-03-14       Impact factor: 6.543

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  4 in total

1.  Metal-isotope-tagged monoclonal antibodies for high-dimensional mass cytometry.

Authors:  Guojun Han; Matthew H Spitzer; Sean C Bendall; Wendy J Fantl; Garry P Nolan
Journal:  Nat Protoc       Date:  2018-10       Impact factor: 13.491

Review 2.  Key steps and methods in the experimental design and data analysis of highly multi-parametric flow and mass cytometry.

Authors:  Paulina Rybakowska; Marta E Alarcón-Riquelme; Concepción Marañón
Journal:  Comput Struct Biotechnol J       Date:  2020-03-31       Impact factor: 7.271

Review 3.  Redefining Tumor-Associated Macrophage Subpopulations and Functions in the Tumor Microenvironment.

Authors:  Kaiyue Wu; Kangjia Lin; Xiaoyan Li; Xiangliang Yuan; Peiqing Xu; Peihua Ni; Dakang Xu
Journal:  Front Immunol       Date:  2020-08-04       Impact factor: 7.561

Review 4.  Deciphering the Immune-Tumor Interplay During Early-Stage Lung Cancer Development via Single-Cell Technology.

Authors:  Wei-Wei Chen; Wei Liu; Yingze Li; Jun Wang; Yijiu Ren; Guangsuo Wang; Chang Chen; Hanjie Li
Journal:  Front Oncol       Date:  2022-01-03       Impact factor: 6.244

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