Literature DB >> 28716960

Bacterial Tubulins A and B Exhibit Polarized Growth, Mixed-Polarity Bundling, and Destabilization by GTP Hydrolysis.

César Díaz-Celis1,2, Viviana I Risca3, Felipe Hurtado4, Jessica K Polka5, Scott D Hansen5, Daniel Maturana4, Rosalba Lagos4, R Dyche Mullins5, Octavio Monasterio1.   

Abstract

Bacteria of the genus Prosthecobacter express homologs of eukaryotic α- and β-tubulin, called BtubA and BtubB (BtubA/B), that have been observed to assemble into filaments in the presence of GTP. BtubA/B polymers are proposed to be composed in vitro by two to six protofilaments in contrast to that in vivo, where they have been reported to form 5-protofilament tubes named bacterial microtubules (bMTs). The btubAB genes likely entered the Prosthecobacter lineage via horizontal gene transfer and may be derived from an early ancestor of the modern eukaryotic microtubule (MT). Previous biochemical studies revealed that BtubA/B polymerization is reversible and that BtubA/B folding does not require chaperones. To better understand BtubA/B filament behavior and gain insight into the evolution of microtubule dynamics, we characterized in vitro BtubA/B assembly using a combination of polymerization kinetics assays and microscopy. Like eukaryotic microtubules, BtubA/B filaments exhibit polarized growth with different assembly rates at each end. GTP hydrolysis stimulated by BtubA/B polymerization drives a stochastic mechanism of filament disassembly that occurs via polymer breakage and/or fast continuous depolymerization. We also observed treadmilling (continuous addition and loss of subunits at opposite ends) of BtubA/B filament fragments. Unlike MTs, polymerization of BtubA/B requires KCl, which reduces the critical concentration for BtubA/B assembly and induces it to form stable mixed-orientation bundles in the absence of any additional BtubA/B-binding proteins. The complex dynamics that we observe in stabilized and unstabilized BtubA/B filaments may reflect common properties of an ancestral eukaryotic tubulin polymer.IMPORTANCE Microtubules are polymers within all eukaryotic cells that perform critical functions; they segregate chromosomes, organize intracellular transport, and support the flagella. These functions rely on the remarkable range of tunable dynamic behaviors of microtubules. Bacterial tubulin A and B (BtubA/B) are evolutionarily related proteins that form polymers. They are proposed to be evolved from the ancestral eukaryotic tubulin, a missing link in microtubule evolution. Using microscopy and biochemical approaches to characterize BtubA/B assembly in vitro, we observed that they exhibit complex and structurally polarized dynamic behavior like eukaryotic microtubules but differ in how they self-associate into bundles and how this bundling affects their stability. Our results demonstrate the diversity of mechanisms through which tubulin homologs promote filament dynamics and monomer turnover.
Copyright © 2017 American Society for Microbiology.

Entities:  

Keywords:  BtubA and BtubB; bacterial cytoskeleton; bacterial microtubule; eukaryotic microtubule; filament assembly; microtubules; polymerization; tubulin evolution

Mesh:

Substances:

Year:  2017        PMID: 28716960      PMCID: PMC5585714          DOI: 10.1128/JB.00211-17

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  36 in total

1.  Structure of bacterial tubulin BtubA/B: evidence for horizontal gene transfer.

Authors:  Daniel Schlieper; María A Oliva; José M Andreu; Jan Löwe
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-20       Impact factor: 11.205

2.  Identification of cation-binding sites on actin that drive polymerization and modulate bending stiffness.

Authors:  Hyeran Kang; Michael J Bradley; Brannon R McCullough; Anaëlle Pierre; Elena E Grintsevich; Emil Reisler; Enrique M De La Cruz
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-01       Impact factor: 11.205

3.  Gene cloning, expression and partial characterization of cell division protein FtsZ1 from extremely halophilic archaeon Haloarcula japonica strain TR-1.

Authors:  Kazumichi Ozawa; Takeyori Harashina; Rie Yatsunami; Satoshi Nakamura
Journal:  Extremophiles       Date:  2005-04-21       Impact factor: 2.395

4.  Architecture and assembly of a divergent member of the ParM family of bacterial actin-like proteins.

Authors:  Christopher R Rivera; Justin M Kollman; Jessica K Polka; David A Agard; R Dyche Mullins
Journal:  J Biol Chem       Date:  2011-02-21       Impact factor: 5.157

5.  A phage tubulin assembles dynamic filaments by an atypical mechanism to center viral DNA within the host cell.

Authors:  James A Kraemer; Marcella L Erb; Christopher A Waddling; Elizabeth A Montabana; Elena A Zehr; Hannah Wang; Katrina Nguyen; Duy Stephen L Pham; David A Agard; Joe Pogliano
Journal:  Cell       Date:  2012-06-22       Impact factor: 41.582

6.  Reconstitution of a prokaryotic minus end-tracking system using TubRC centromeric complexes and tubulin-like protein TubZ filaments.

Authors:  Gero Fink; Jan Löwe
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-30       Impact factor: 12.779

7.  Microtubules in bacteria: Ancient tubulins build a five-protofilament homolog of the eukaryotic cytoskeleton.

Authors:  Martin Pilhofer; Mark S Ladinsky; Alasdair W McDowall; Giulio Petroni; Grant J Jensen
Journal:  PLoS Biol       Date:  2011-12-06       Impact factor: 8.029

8.  Six subgroups and extensive recent duplications characterize the evolution of the eukaryotic tubulin protein family.

Authors:  Peggy Findeisen; Stefanie Mühlhausen; Silke Dempewolf; Jonny Hertzog; Alexander Zietlow; Teresa Carlomagno; Martin Kollmar
Journal:  Genome Biol Evol       Date:  2014-08-27       Impact factor: 3.416

9.  BtubA-BtubB heterodimer is an essential intermediate in protofilament assembly.

Authors:  Christopher A Sontag; Harvey Sage; Harold P Erickson
Journal:  PLoS One       Date:  2009-09-29       Impact factor: 3.240

10.  Characterization of bacterial operons consisting of two tubulins and a kinesin-like gene by the novel Two-Step Gene Walking method.

Authors:  Martin Pilhofer; Andreas Peter Bauer; Martina Schrallhammer; Lothar Richter; Wolfgang Ludwig; Karl-Heinz Schleifer; Giulio Petroni
Journal:  Nucleic Acids Res       Date:  2007-10-16       Impact factor: 16.971

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  5 in total

1.  Behaviors of individual microtubules and microtubule populations relative to critical concentrations: dynamic instability occurs when critical concentrations are driven apart by nucleotide hydrolysis.

Authors:  Erin M Jonasson; Ava J Mauro; Chunlei Li; Ellen C Labuz; Shant M Mahserejian; Jared P Scripture; Ivan V Gregoretti; Mark Alber; Holly V Goodson
Journal:  Mol Biol Cell       Date:  2019-10-02       Impact factor: 4.138

Review 2.  Multidomain ribosomal protein trees and the planctobacterial origin of neomura (eukaryotes, archaebacteria).

Authors:  Thomas Cavalier-Smith; Ema E-Yung Chao
Journal:  Protoplasma       Date:  2020-01-03       Impact factor: 3.356

Review 3.  Protein folding and surface interaction phase diagrams in vitro and in cells.

Authors:  Martin Gruebele
Journal:  FEBS Lett       Date:  2021-03-27       Impact factor: 4.124

Review 4.  Intracellular Organization by Jumbo Bacteriophages.

Authors:  Jingwen Guan; Joseph Bondy-Denomy
Journal:  J Bacteriol       Date:  2020-12-18       Impact factor: 3.490

5.  Shaping Liposomes by Cell-Free Expressed Bacterial Microtubules.

Authors:  Johannes Kattan; Anne Doerr; Marileen Dogterom; Christophe Danelon
Journal:  ACS Synth Biol       Date:  2021-09-29       Impact factor: 5.110

  5 in total

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