Literature DB >> 28695283

AIDS in chimpanzees: the role of MHC genes.

Natasja G de Groot1, Corinne M C Heijmans2, Ronald E Bontrop2,3.   

Abstract

The ancestral progenitor of common chimpanzees and bonobos experienced a selective sweep that ravaged its major histocompatibility complex (MHC) class I repertoire. The causative agent was probably an ancestral retrovirus, highly related to the contemporary HIV-1 strain, which initiated the acquired immunodeficiency syndrome pandemic in the human population. As a direct result, MHC class I allotypes with the capability of targeting conserved retroviral elements were enriched in the ancestral progenitor. Even today, the impact can be traced back by studying the functional capacities of the contemporary MHC class I allotypes of common chimpanzees. Viruses, however, have developed several strategies to manipulate the cell-surface expression of MHC class I genes. Monitoring the presence and absence of the MHC class I allotypes on the cell surface is conducted, for instance, by the hosts' gene products of the killer cell immunoglobulin-like receptor (KIR) complex. Hence, one may wonder whether-in the future-any clues with regard to the signature of the MHC class I selective sweep might be unearthed for the KIR genes as well.

Entities:  

Keywords:  Chimpanzees; Repertoire reduction; Selection; Selective sweep

Mesh:

Substances:

Year:  2017        PMID: 28695283     DOI: 10.1007/s00251-017-1006-6

Source DB:  PubMed          Journal:  Immunogenetics        ISSN: 0093-7711            Impact factor:   2.846


  97 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-27       Impact factor: 11.205

2.  Nomenclature for factors of the HLA system, update December 2016.

Authors:  Steven G E Marsh
Journal:  Hum Immunol       Date:  2017-01-20       Impact factor: 2.850

3.  The human major histocompatibility complex class Ib molecule HLA-E binds signal sequence-derived peptides with primary anchor residues at positions 2 and 9.

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4.  Comparison of chimpanzee and human leukocyte Ig-like receptor genes reveals framework and rapidly evolving genes.

Authors:  F Canavez; N T Young; L A Guethlein; R Rajalingam; S I Khakoo; B P Shum; P Parham
Journal:  J Immunol       Date:  2001-11-15       Impact factor: 5.422

5.  A Distinctive Cytoplasmic Tail Contributes to Low Surface Expression and Intracellular Retention of the Patr-AL MHC Class I Molecule.

Authors:  Ana Goyos; Lisbeth A Guethlein; Amir Horowitz; Hugo G Hilton; Michael Gleimer; Frances M Brodsky; Peter Parham
Journal:  J Immunol       Date:  2015-09-14       Impact factor: 5.422

6.  Single haplotype analysis demonstrates rapid evolution of the killer immunoglobulin-like receptor (KIR) loci in primates.

Authors:  Jennifer G Sambrook; Arman Bashirova; Sophie Palmer; Sarah Sims; John Trowsdale; Laurent Abi-Rached; Peter Parham; Mary Carrington; Stephan Beck
Journal:  Genome Res       Date:  2005-01       Impact factor: 9.043

7.  Reduced MIC gene repertoire variation in West African chimpanzees as compared to humans.

Authors:  Natasja G de Groot; Christian A Garcia; Ernst J Verschoor; Gaby G M Doxiadis; Steven G E Marsh; Nel Otting; Ronald E Bontrop
Journal:  Mol Biol Evol       Date:  2005-03-09       Impact factor: 16.240

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Authors:  John Sidney; Bjoern Peters; Nicole Frahm; Christian Brander; Alessandro Sette
Journal:  BMC Immunol       Date:  2008-01-22       Impact factor: 3.615

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Authors:  Javier Prado-Martinez; Peter H Sudmant; Jeffrey M Kidd; Heng Li; Joanna L Kelley; Belen Lorente-Galdos; Krishna R Veeramah; August E Woerner; Timothy D O'Connor; Gabriel Santpere; Alexander Cagan; Christoph Theunert; Ferran Casals; Hafid Laayouni; Kasper Munch; Asger Hobolth; Anders E Halager; Maika Malig; Jessica Hernandez-Rodriguez; Irene Hernando-Herraez; Kay Prüfer; Marc Pybus; Laurel Johnstone; Michael Lachmann; Can Alkan; Dorina Twigg; Natalia Petit; Carl Baker; Fereydoun Hormozdiari; Marcos Fernandez-Callejo; Marc Dabad; Michael L Wilson; Laurie Stevison; Cristina Camprubí; Tiago Carvalho; Aurora Ruiz-Herrera; Laura Vives; Marta Mele; Teresa Abello; Ivanela Kondova; Ronald E Bontrop; Anne Pusey; Felix Lankester; John A Kiyang; Richard A Bergl; Elizabeth Lonsdorf; Simon Myers; Mario Ventura; Pascal Gagneux; David Comas; Hans Siegismund; Julie Blanc; Lidia Agueda-Calpena; Marta Gut; Lucinda Fulton; Sarah A Tishkoff; James C Mullikin; Richard K Wilson; Ivo G Gut; Mary Katherine Gonder; Oliver A Ryder; Beatrice H Hahn; Arcadi Navarro; Joshua M Akey; Jaume Bertranpetit; David Reich; Thomas Mailund; Mikkel H Schierup; Christina Hvilsom; Aida M Andrés; Jeffrey D Wall; Carlos D Bustamante; Michael F Hammer; Evan E Eichler; Tomas Marques-Bonet
Journal:  Nature       Date:  2013-07-03       Impact factor: 49.962

10.  Broad and Gag-biased HIV-1 epitope repertoires are associated with lower viral loads.

Authors:  Morgane Rolland; David Heckerman; Wenjie Deng; Christine M Rousseau; Hoosen Coovadia; Karen Bishop; Philip J R Goulder; Bruce D Walker; Christian Brander; James I Mullins
Journal:  PLoS One       Date:  2008-01-09       Impact factor: 3.240

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  7 in total

1.  Foreword: Immunogenetics special issue 2017.

Authors:  Ronald E Bontrop
Journal:  Immunogenetics       Date:  2017-08       Impact factor: 2.846

2.  Limited MHC class II gene polymorphism in the West African chimpanzee is distributed maximally by haplotype diversity.

Authors:  Nel Otting; Natasja G de Groot; Ronald E Bontrop
Journal:  Immunogenetics       Date:  2018-08-29       Impact factor: 2.846

Review 3.  Nonhuman primate models of human viral infections.

Authors:  Jacob D Estes; Scott W Wong; Jason M Brenchley
Journal:  Nat Rev Immunol       Date:  2018-06       Impact factor: 53.106

4.  Reduced bonobo MHC class I diversity predicts a reduced viral peptide binding ability compared to chimpanzees.

Authors:  Vincent Maibach; Linda Vigilant
Journal:  BMC Evol Biol       Date:  2019-01-10       Impact factor: 3.260

5.  CD4 receptor diversity in chimpanzees protects against SIV infection.

Authors:  Frederic Bibollet-Ruche; Ronnie M Russell; Weimin Liu; Guillaume B E Stewart-Jones; Scott Sherrill-Mix; Yingying Li; Gerald H Learn; Andrew G Smith; Marcos V P Gondim; Lindsey J Plenderleith; Julie M Decker; Juliet L Easlick; Katherine S Wetzel; Ronald G Collman; Shilei Ding; Andrés Finzi; Ahidjo Ayouba; Martine Peeters; Fabian H Leendertz; Joost van Schijndel; Annemarie Goedmakers; Els Ton; Christophe Boesch; Hjalmar Kuehl; Mimi Arandjelovic; Paula Dieguez; Mizuki Murai; Christelle Colin; Kathelijne Koops; Sheri Speede; Mary K Gonder; Martin N Muller; Crickette M Sanz; David B Morgan; Rebecca Atencia; Debby Cox; Alex K Piel; Fiona A Stewart; Jean-Bosco N Ndjango; Deus Mjungu; Elizabeth V Lonsdorf; Anne E Pusey; Peter D Kwong; Paul M Sharp; George M Shaw; Beatrice H Hahn
Journal:  Proc Natl Acad Sci U S A       Date:  2019-02-04       Impact factor: 11.205

6.  Genetic adaptations to SIV across chimpanzee populations.

Authors:  Harvinder Pawar; Harrison J Ostridge; Joshua M Schmidt; Aida M Andrés
Journal:  PLoS Genet       Date:  2022-08-25       Impact factor: 6.020

7.  Binding affinities of 438 HLA proteins to complete proteomes of seven pandemic viruses and distributions of strongest and weakest HLA peptide binders in populations worldwide.

Authors:  Rodrigo Barquera; Evelyn Collen; Da Di; Stéphane Buhler; João Teixeira; Bastien Llamas; José M Nunes; Alicia Sanchez-Mazas
Journal:  HLA       Date:  2020-06-11       Impact factor: 8.762

  7 in total

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