Literature DB >> 15758205

Reduced MIC gene repertoire variation in West African chimpanzees as compared to humans.

Natasja G de Groot1, Christian A Garcia, Ernst J Verschoor, Gaby G M Doxiadis, Steven G E Marsh, Nel Otting, Ronald E Bontrop.   

Abstract

The human major histocompatibility complex class I chain-related (MIC) genes are members of a multicopy family showing similarity to the classical HLA-A, HLA-B, and HLA-C genes. Only the MICA and MICB genes produce functional transcripts. In chimpanzees, however, only one MIC gene is expressed, showing an intermediate character, resulting from a deletion fusing the MICA and MICB gene segments together. The present population study illustrates that all chimpanzee haplotypes sampled possess the hybrid MICA/B gene. In contrast to the human situation this gene displays reduced allelic variation. The observed repertoire reduction of the chimpanzee MICA/B gene is in conformity with the severe repertoire condensation documented for Patr-B locus lineages, probably due to the close proximity of both genes.

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Year:  2005        PMID: 15758205     DOI: 10.1093/molbev/msi127

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  17 in total

1.  Genotyping and segregation analyses indicate the presence of only two functional MIC genes in rhesus macaques.

Authors:  Anne Averdam; Sandra Seelke; Immanuel Grützner; Cornelia Rosner; Christian Roos; Nico Westphal; Christiane Stahl-Hennig; Vijayakumar Muppala; Annette Schrod; Ulrike Sauermann; Ralf Dressel; Lutz Walter
Journal:  Immunogenetics       Date:  2007-01-11       Impact factor: 2.846

2.  Although divergent in residues of the peptide binding site, conserved chimpanzee Patr-AL and polymorphic human HLA-A*02 have overlapping peptide-binding repertoires.

Authors:  Michael Gleimer; Angela R Wahl; Heather D Hickman; Laurent Abi-Rached; Paul J Norman; Lisbeth A Guethlein; John A Hammond; Monia Draghi; Erin J Adams; Sean Juo; Roxana Jalili; Baback Gharizadeh; Mostafa Ronaghi; K Christopher Garcia; William H Hildebrand; Peter Parham
Journal:  J Immunol       Date:  2011-01-05       Impact factor: 5.422

3.  Limited MHC class I intron 2 repertoire variation in bonobos.

Authors:  Natasja G de Groot; Corrine M C Heijmans; Philippe Helsen; Nel Otting; Zjef Pereboom; Jeroen M G Stevens; Ronald E Bontrop
Journal:  Immunogenetics       Date:  2017-06-16       Impact factor: 2.846

Review 4.  AIDS in chimpanzees: the role of MHC genes.

Authors:  Natasja G de Groot; Corinne M C Heijmans; Ronald E Bontrop
Journal:  Immunogenetics       Date:  2017-07-10       Impact factor: 2.846

5.  Limited MHC class II gene polymorphism in the West African chimpanzee is distributed maximally by haplotype diversity.

Authors:  Nel Otting; Natasja G de Groot; Ronald E Bontrop
Journal:  Immunogenetics       Date:  2018-08-29       Impact factor: 2.846

6.  AIDS-protective HLA-B*27/B*57 and chimpanzee MHC class I molecules target analogous conserved areas of HIV-1/SIVcpz.

Authors:  Natasja G de Groot; Corrine M C Heijmans; Yvonne M Zoet; Arnoud H de Ru; Frank A Verreck; Peter A van Veelen; Jan W Drijfhout; Gaby G M Doxiadis; Edmond J Remarque; Ilias I N Doxiadis; Jon J van Rood; Frits Koning; Ronald E Bontrop
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-09       Impact factor: 11.205

Review 7.  Immunogenetics of the NKG2D ligand gene family.

Authors:  Masanori Kasahara; Shigeru Yoshida
Journal:  Immunogenetics       Date:  2012-07-29       Impact factor: 2.846

8.  The chimpanzee Mhc-DRB region revisited: gene content, polymorphism, pseudogenes, and transcripts.

Authors:  Natasja G de Groot; Corrine M C Heijmans; Nanine de Groot; Gaby G M Doxiadis; Nel Otting; Ronald E Bontrop
Journal:  Mol Immunol       Date:  2009-10-02       Impact factor: 4.407

9.  High diversity of MIC genes in non-human primates.

Authors:  Alice Meyer; Raphael Carapito; Louise Ott; Mirjana Radosavljevic; Philippe Georgel; Erin J Adams; Peter Parham; Ronald E Bontrop; Antoine Blancher; Seiamak Bahram
Journal:  Immunogenetics       Date:  2014-07-31       Impact factor: 2.846

10.  Evaluation of IL-28B polymorphisms and serum IP-10 in hepatitis C infected chimpanzees.

Authors:  Babs E Verstrepen; Natasja G de Groot; Zwier M A Groothuismink; Ernst J Verschoor; Rik A de Groen; Willy M Bogers; Harry L A Janssen; Petra Mooij; Ronald E Bontrop; Gerrit Koopman; Andre Boonstra
Journal:  PLoS One       Date:  2012-10-30       Impact factor: 3.240

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