Literature DB >> 28687652

High Temporal and Spatial Variability of Atmospheric-Methane Oxidation in Alpine Glacier Forefield Soils.

Eleonora Chiri1, Philipp A Nauer1, Edda-Marie Rainer1, Josef Zeyer1, Martin H Schroth2.   

Abstract

Glacier forefield soils can provide a substantial sink for atmospheric CH4, facilitated by aerobic methane-oxidizing bacteria (MOB). However, MOB activity, abundance, and community structure may be affected by soil age, MOB location in different forefield landforms, and temporal fluctuations in soil physical parameters. We assessed the spatial and temporal variability of atmospheric-CH4 oxidation in an Alpine glacier forefield during the snow-free season of 2013. We quantified CH4 flux in soils of increasing age and in different landforms (sandhill, terrace, and floodplain forms) by using soil gas profile and static flux chamber methods. To determine MOB abundance and community structure, we employed pmoA gene-based quantitative PCR and targeted amplicon sequencing. Uptake of CH4 increased in magnitude and decreased in variability with increasing soil age. Sandhill soils exhibited CH4 uptake rates ranging from -3.7 to -0.03 mg CH4 m-2 day-1 Floodplain and terrace soils exhibited lower uptake rates and even intermittent CH4 emissions. Linear mixed-effects models indicated that soil age and landform were the dominating factors shaping CH4 flux, followed by cumulative rainfall (weighted sum ≤4 days prior to sampling). Of 31 MOB operational taxonomic units retrieved, ∼30% were potentially novel, and ∼50% were affiliated with upland soil clusters gamma and alpha. The MOB community structures in floodplain and terrace soils were nearly identical but differed significantly from the highly variable sandhill soil communities. We concluded that soil age and landform modulate the soil CH4 sink strength in glacier forefields and that recent rainfall affects its short-term variability. This should be taken into account when including this environment in future CH4 inventories.IMPORTANCE Oxidation of methane (CH4) in well-drained, "upland" soils is an important mechanism for the removal of this potent greenhouse gas from the atmosphere. It is largely mediated by aerobic, methane-oxidizing bacteria (MOB). Whereas there is abundant information on atmospheric-CH4 oxidation in mature upland soils, little is known about this important function in young, developing soils, such as those found in glacier forefields, where new sediments are continuously exposed to the atmosphere as a result of glacial retreat. In this field-based study, we investigated the spatial and temporal variability of atmospheric-CH4 oxidation and associated MOB communities in Alpine glacier forefield soils, aiming at better understanding the factors that shape the sink for atmospheric CH4 in this young soil ecosystem. This study contributes to the knowledge on the dynamics of atmospheric-CH4 oxidation in developing upland soils and represents a further step toward the inclusion of Alpine glacier forefield soils in global CH4 inventories.
Copyright © 2017 American Society for Microbiology.

Entities:  

Keywords:  atmospheric-methane oxidation; glacier forefield soil; high-affinity MOB; methane flux; methanotroph; pmoA; proglacial landforms

Year:  2017        PMID: 28687652      PMCID: PMC5583497          DOI: 10.1128/AEM.01139-17

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  34 in total

1.  Molecular analyses of novel methanotrophic communities in forest soil that oxidize atmospheric methane.

Authors:  T Henckel; U Jäckel; S Schnell; R Conrad
Journal:  Appl Environ Microbiol       Date:  2000-05       Impact factor: 4.792

2.  Changes in soil microbial community structure and function in an alpine dry meadow following spring snow melt.

Authors:  D A Lipson; C W Schadt; S K Schmidt
Journal:  Microb Ecol       Date:  2002-03-05       Impact factor: 4.552

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Authors:  Philipp A Nauer; Eleonora Chiri; Martin H Schroth
Journal:  Environ Sci Technol       Date:  2013-09-10       Impact factor: 9.028

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Authors:  Peter F Dunfield; Merlin Tchawa Yimga; Svetlana N Dedysh; Ursula Berger; Werner Liesack; Jürgen Heyer
Journal:  FEMS Microbiol Ecol       Date:  2002-07-01       Impact factor: 4.194

Review 7.  Methane emissions from wetlands: biogeochemical, microbial, and modeling perspectives from local to global scales.

Authors:  Scott D Bridgham; Hinsby Cadillo-Quiroz; Jason K Keller; Qianlai Zhuang
Journal:  Glob Chang Biol       Date:  2013-02-11       Impact factor: 10.863

Review 8.  Diversity and Habitat Preferences of Cultivated and Uncultivated Aerobic Methanotrophic Bacteria Evaluated Based on pmoA as Molecular Marker.

Authors:  Claudia Knief
Journal:  Front Microbiol       Date:  2015-12-15       Impact factor: 5.640

9.  A hydration-based biophysical index for the onset of soil microbial coexistence.

Authors:  Gang Wang; Dani Or
Journal:  Sci Rep       Date:  2012-11-22       Impact factor: 4.379

10.  Structures of Microbial Communities in Alpine Soils: Seasonal and Elevational Effects.

Authors:  Anna Lazzaro; Daniela Hilfiker; Josef Zeyer
Journal:  Front Microbiol       Date:  2015-11-26       Impact factor: 5.640

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  4 in total

1.  Termite mounds contain soil-derived methanotroph communities kinetically adapted to elevated methane concentrations.

Authors:  Eleonora Chiri; Philipp A Nauer; Chris Greening; Rachael Lappan; David W Waite; Thanavit Jirapanjawat; Xiyang Dong; Stefan K Arndt
Journal:  ISME J       Date:  2020-07-24       Impact factor: 10.302

2.  Bark-dwelling methanotrophic bacteria decrease methane emissions from trees.

Authors:  Luke C Jeffrey; Damien T Maher; Eleonora Chiri; Pok Man Leung; Philipp A Nauer; Stefan K Arndt; Douglas R Tait; Chris Greening; Scott G Johnston
Journal:  Nat Commun       Date:  2021-04-09       Impact factor: 14.919

3.  USCγ Dominated Community Composition and Cooccurrence Network of Methanotrophs and Bacteria in Subterranean Karst Caves.

Authors:  Xiao-Yu Cheng; Xiao-Yan Liu; Hong-Mei Wang; Chun-Tian Su; Rui Zhao; Paul L E Bodelier; Wei-Qi Wang; Li-Yuan Ma; Xiao-Lu Lu
Journal:  Microbiol Spectr       Date:  2021-08-18

4.  Sink or Source: Alternative Roles of Glacier Foreland Meadow Soils in Methane Emission Is Regulated by Glacier Melting on the Tibetan Plateau.

Authors:  Tingting Xing; Pengfei Liu; Mukan Ji; Yongcui Deng; Keshao Liu; Wenqiang Wang; Yongqin Liu
Journal:  Front Microbiol       Date:  2022-03-21       Impact factor: 5.640

  4 in total

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