| Literature DB >> 28678196 |
Jia-Syun Lu1, Ming-Chung Yang2, Ming-Der Su3,4.
Abstract
Three computational methods (M06-2X/Def2-TZVP, B3PW91/Def2-TZVP and B3LYP/LANL2DZ+dp) were used to study the effect of substitution on the potential energy surfaces of RTl≡PR (R = F, OH, H, CH₃, SiH₃, SiMe(SitBu₃)₂, SiiPrDis₂, Tbt (=C₆H₂-2,4,6-(CH(SiMe₃)₂)₃), and Ar* (=C₆H₃-2,6-(C₆H₂-2, 4,6-i-Pr₃)₂)). The theoretical results show that these triply bonded RTl≡PR compounds have a preference for a bent geometry (i.e., ∠R⎼Tl⎼P ≈ 180° and ∠Tl⎼P⎼R ≈ 120°). Two valence bond models are used to interpret the bonding character of the Tl≡P triple bond. One is model [I], which is best described as TlP. This interprets the bonding conditions for RTl≡PR molecules that feature small ligands. The other is model [II], which is best represented as TlP. This explains the bonding character of RTl≡PR molecules that feature large substituents. Irrespective of the types of substituents used for the RTl≡PR species, the theoretical investigations (based on the natural bond orbital, the natural resonance theory, and the charge decomposition analysis) demonstrate that their Tl≡P triple bonds are very weak. However, the theoretical results predict that only bulkier substituents greatly stabilize the triply bonded RTl≡PR species, from the kinetic viewpoint.Entities:
Keywords: acetylene; substituent effects; triple bond; triply bonded molecules
Mesh:
Substances:
Year: 2017 PMID: 28678196 PMCID: PMC6152323 DOI: 10.3390/molecules22071111
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1The interaction models, [I] and [II], for the triply bonded RTl≡PR molecule.
The important geometrical parameters, the natural charge densities (QTl and QP), the binding energies (BE), the HOMO-LUMO energy gaps and the Wiberg Bond Index (WBI) for RTl≡PR using the M06-2X/Def2-TZVP, B3PW91/Def2-TZVP (in round brackets) and B3LYP/LANL2DZ+dp (in square brackets) levels of theory.
| R | F | OH | H | CH3 | SiH3 |
|---|---|---|---|---|---|
| 2.422 | 2.437 | 2.320 | 2.339 | 2.313 | |
| (2.425) | (2.443) | (2.327) | (2.349) | (2.336) | |
| [2.455] | [2.480] | [2.331] | [2.360] | [2.337] | |
| 179.7 | 179.1 | 179.1 | 175.2 | 174.6 | |
| (179.7) | (176.5) | (178.5) | (174.5) | (175.7) | |
| [178.5] | [177.9] | [178.2] | [171.3] | [179.1] | |
| 94.63 | 98.92 | 86.51 | 100.4 | 94.76 | |
| (96.59) | (101.5) | (86.82) | (102.2) | (92.71) | |
| [94.22] | [100.1] | [86.36] | [102.6] | [90.78] | |
| 180.0 | 179.4 | 179.1 | 178.0 | 177.0 | |
| (180.0) | (178.8) | (179.2) | (178.8) | (179.1) | |
| [180.0] | [179.2] | [179.8] | [179.9] | [179.4] | |
| 0.16 | 0.076 | −0.63 | −0.37 | −0.83 | |
| (0.17) | (0.13) | (−0.60) | (−0.33) | (−0.72) | |
| [0.096] | [0.021] | [−0.62] | [−0.39] | [−0.76] | |
| 1.19 | 1.14 | 1.12 | 1.07 | 0.82 | |
| (1.11) | (1.03) | (0.87) | (0.99) | (0.75) | |
| [1.25] | [1.17] | [0.99] | [1.13] | [0.89] | |
| 102.1 | 83.57 | 84.85 | 66.82 | 75.96 | |
| (103.7) | (80.69) | (85.69) | (67.38) | (77.63) | |
| [102.2] | [83.15] | [83.05] | [67.94] | [74.40] | |
| −28.91 | −17.53 | −30.75 | −26.43 | −15.84 | |
| (−33.35) | (−21.29) | (−35.49) | (−30.26) | (−18.68) | |
| [−31.76] | [−20.24] | [−33.16] | [−29.21] | [−14.46] | |
| 184.1 | 167.6 | 210.6 | 151.2 | 142.1 | |
| (131.6) | (118.1) | (212.0) | (149.3) | (145.1) | |
| [182.5] | [169.1] | [215.4] | [146.5] | [148.5] | |
| 95.58 | 83.57 | 84.85 | 66.82 | 75.96 | |
| (95.74) | (82.10) | (85.69) | (67.38) | (77.63) | |
| [93.43] | [83.15] | [83.05] | [67.94] | [74.40] | |
| 1.159 | 1.162 | 1.456 | 1.382 | 1.404 | |
| (1.194) | (1.197) | (1.491) | (1.415) | (1.417) | |
| [1.191] | [1.178] | [1.475] | [1.403] | [1.372] |
(1) The natural charge density on the central phosphorus atom; (2) The natural charge density on the central thallium atom; (3) ΔEST (kcal mol−1) = E(triplet state for R⎼Tl) – E(singlet state for R⎼Tl); (4) ΔEST (kcal mol−1) = E(triplet state for R⎼P) – E(singlet state for R⎼P); (5) BE (kcal mol−1) = E(singlet state for R⎼Tl) + E(triplet state for R⎼P) – E(singlet for RTl≡PR); (6) The Wiberg bond index (WBI) for the Tl≡P bond: see reference [59,60,61].
Figure 2The Relative Gibbs free energy surfaces for RTl≡PR (R = F, OH, H, CH3 and SiH3). These energies are in kcal/mol and are calculated at the M06-2X/Def2-TZVP, B3PW91/Def2-TZVP, and B3LYP/LANL2DZ+dp levels of theory. For details see the text and Table 1.
Figure 3Four bulky groups. For details, see references [66,67].
The Bond Lengths (Å), Bond Angels (°), Singlet—Triplet Energy Splitting (ΔEST), Natural Charge Densities (QTl and QP), Binding Energies (BE), the HOMO-LUMO Energy Gaps, the Wiberg bond index (WBI), and Some Reaction Enthalpies for R′Tl≡PR′ at the dispersion-corrected M06-2X/Def2-TZVP Level of Theory. See also Figure 4.
| R′ | SiMe(Si | Si | Tbt | Ar* |
|---|---|---|---|---|
| 2.386 | 2.384 | 2.385 | 2.336 | |
| 166.9 | 166.4 | 168.9 | 161.2 | |
| 122.3 | 113.7 | 116.2 | 115.6 | |
| 171.4 | 179.5 | 173.9 | 174.4 | |
| 0.975 | 0.739 | 1.166 | 1.218 | |
| −0.860 | −0.826 | −0.344 | −0.257 | |
| 35.91 | 35.52 | 31.27 | 30.24 | |
| −43.10 | −37.47 | −39.74 | −40.52 | |
| 71.27 | 27.21 | 58.05 | 39.34 | |
| 80.24 | 85.43 | 62.51 | 67.89 | |
| 91.34 | 90.49 | 89.22 | 87.11 | |
| 73.98 | 72.83 | 71.27 | 74.01 | |
| 2.116 | 2.273 | 2.127 | 2.201 |
(1) The natural charge density on the central thallium atom; (2) The natural charge density on the central phosphorus atom; (3) ΔEST (kcal mol−1) = E(triplet state for R′⎼Tl) – E(singlet state for R′⎼Tl); (4) ΔEST (kcal mol−1) = E(triplet state for R′⎼P) – E(singlet state for R′⎼P); (5) BE (kcal mol−1) = E(triplet state for R′⎼Tl) + E(singlet state for R′⎼P) – E(singlet for R′Tl≡PR′); (6) See Figure 4; (7) The Wiberg bond index (WBI) for the Tl≡P bond: see reference [59,60,61].
The charge decomposition analysis (CDA) (a) for R′Tl≡PR′ (R′ = SiMe(SitBu3)2) system based on M06-2X orbitals, where the X term indicates the number of electrons donated from R′⎼Tl fragment to R′⎼P fragment, the Y term indicates the number of electrons back donated from R′⎼P fragment to R′⎼Tl fragment and the Q term indicates the number of electrons involved in repulsive polarization. Significant X and Y terms are bolded for easier comparison. (a),(b)
| Orbital | Occupancy | X | Y | X – Y | Q | |
|---|---|---|---|---|---|---|
| 218 | 2.000000 | 0.000757 | 0.000586 | 0.000171 | −0.002462 | |
| 219 | 2.000000 | 0.001036 | 0.000522 | 0.000513 | −0.004450 | |
| 220 | 2.000000 | 0.000932 | 0.000539 | 0.000394 | −0.006342 | |
| 221 | 2.000000 | 0.000026 | 0.004350 | −0.004325 | −0.002504 | |
| 222 | 2.000000 | 0.001151 | −0.000164 | 0.001315 | −0.001354 | |
| 223 | 2.000000 | 0.000081 | 0.003145 | −0.003064 | −0.001960 | |
| 224 | 2.000000 | 0.000037 | 0.002403 | −0.002366 | −0.000054 | |
| 225 | 2.000000 | 0.001777 | 0.029263 | −0.027486 | −0.030329 | |
| 226 | 2.000000 | 0.000477 | 0.013735 | −0.013259 | −0.007124 | |
| 227 | 2.000000 | 0.008445 | 0.068258 | −0.059813 | −0.018272 | |
| HOMO | 228 | 2.000000 | −0.005339 | 0.003033 | −0.008432 | −0.004437 |
| LUMO | 229 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
| 230 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | |
| sum | 456.000000 | 0.028853 | 0.241774 | −0.212922 | −0.107250 |
(a) For clearness, only list the X, Y, and Q terms for HOMO (No.228) ⎼10 ~ LUMO+2. (b) Summation of contributions from all unoccupied and occupied orbitals.
The natural bond orbital (NBO) and the natural resonance theory (NRT) analysis for R′Tl≡PR′ molecules that feature ligands (R′ = SiMe(SitBu3)2, SiiPrDis2, Tbt, and Ar*) at the dispersion-corrected M06-2X/Def2-TZVP level of theory (1,2).
| R′Tl≡PR′ | WBI | NBO Analysis | NRT Analysis | |||
|---|---|---|---|---|---|---|
| Occupancy | Hybridization | Polarization | Total/Covalent/Ionic | Resonance Weight | ||
| R′ = SiMe(Si | 2.11 | σ = 2.21 | σ : 0.5116 Tl (sp1.27) + 0.8592 P (sp2.07) | 26.18% (Tl) | 2.22/1.55/0.67 | Tl⎼P: 23.17% |
| 73.82% (P) | ||||||
| π⊥ = 1.84 | π⊥: 0.3114 Tl (sp4.77) + 0.9503 P (sp1.42) | 9.70% (Tl) | ||||
| 90.30% (P) | ||||||
| π‖ = 1.92 | π‖: 0.6833 Tl (sp99.87) + 0.7556 P (sp99.99) | 5.69% (Tl) | ||||
| 94.31% (P) | ||||||
| R′ = Si | 2.37 | σ = 1.83 | σ : 0.6422 Tl (sp0.86) + 0.7665 P (sp20.18) | 41.24% (Tl) | 2.59/0.83/1.76 | Tl⎼P: 17.35% |
| 58.76% (P) | ||||||
| π⊥ = 1.92 | π⊥: 0.4064 Tl (sp99.99) + 0.9137 P (sp44.72) | 16.51% (Tl) | ||||
| 83.49% (P) | ||||||
| π‖ = 1.93 | π‖: 0.4551 Tl (sp99.99) + 0.8997 P (sp94.99) | 14.79% (Tl) | ||||
| 85.21% (P) | ||||||
| R′ = Tbt | 2.13 | σ = 1.77 | σ : 0.6888 Tl (sp0.94) + 0.7249 P (sp38.46) | 47.45% (Tl) | 2.08/1.59/0.49 | Tl⎼P: 27.42% |
| 52.55% (P) | ||||||
| π⊥ = 1.94 | π⊥: 0.4133 Tl (sp35.51) + 0.9244 P (sp87.83) | 23.43% (Tl) | ||||
| 82.74% (P) | ||||||
| π‖ = 1.90 | π‖: 0.4118 Tl (sp99.89) + 0.9077 P (sp99.99) | 17.28% (Tl) | ||||
| 82.72% (P) | ||||||
| R′ = Ar* | 2.20 | σ = 1.96 | σ: 0.7362 Tl (sp0.04) + 0.6767 P (sp64.96) | 54.20% (Tl) | 2.17/1.66/0.51 | Tl⎼P: 19.82% |
| 45.80% (P) | ||||||
| π⊥ = 1.77 | π⊥: 0.3177 Tl (sp99.99) + 0.9482 P (sp99.99) | 10.09% (Tl) | ||||
| 89.91% (P) | ||||||
| π‖ = 1.92 | π‖: 0.4083 Tl (sp99.99) + 0.9128 P (sp99.99) | 16.67% (Tl) | ||||
| 83.33% (P) | ||||||
(1) The value of the Wiberg bond index (WBI) for the Tl–P bond and the occupancy of the corresponding σ and π bonding NBO (see reference [59,60,61]). (2) NRT; see reference [70,71,72].
Figure 5The natural Tl≡P π bonding orbitals ((a) and (b)) for (SiMe(SitBu3)2)Tl≡P(SiMe(SitBu3)2). For comparison, see also Figure 3.
Figure 6The predicted geometrical structure based on the present theoretical calculations.