Literature DB >> 28673978

Unearthing a sesterterpene biosynthetic repertoire in the Brassicaceae through genome mining reveals convergent evolution.

Ancheng C Huang1, Satria A Kautsar2, Young J Hong3, Marnix H Medema2, Andrew D Bond4, Dean J Tantillo3, Anne Osbourn5.   

Abstract

Sesterterpenoids are a rare terpene class harboring untapped chemodiversity and bioactivities. Their structural diversity originates primarily from the scaffold-generating sesterterpene synthases (STSs). In fungi, all six known STSs are bifunctional, containing C-terminal trans-prenyltransferase (PT) and N-terminal terpene synthase (TPS) domains. In plants, two colocalized PT and TPS gene pairs from Arabidopsis thaliana were recently reported to synthesize sesterterpenes. However, the landscape of PT and TPS genes in plant genomes is unclear. Here, using a customized algorithm for systematically searching plant genomes, we reveal a suite of physically colocalized pairs of PT and TPS genes for the biosynthesis of a large sesterterpene repertoire in the wider Brassicaceae. Transient expression of seven TPSs from A. thaliana, Capsella rubella, and Brassica oleracea in Nicotiana benthamiana yielded fungal-type sesterterpenes with tri-, tetra-, and pentacyclic scaffolds, and notably (-)-ent-quiannulatene, an enantiomer of the fungal metabolite (+)-quiannulatene. Protein and structural modeling analysis identified an amino acid site implicated in structural diversification. Mutation of this site in one STS (AtTPS19) resulted in premature termination of carbocation intermediates and accumulation of bi-, tri-, and tetracyclic sesterterpenes, revealing the cyclization path for the pentacyclic sesterterpene (-)-retigeranin B. These structural and mechanistic insights, together with phylogenetic analysis, suggest convergent evolution of plant and fungal STSs, and also indicate that the colocalized PT-TPS gene pairs in the Brassicaceae may have originated from a common ancestral gene pair present before speciation. Our findings further provide opportunities for rapid discovery and production of sesterterpenes through metabolic and protein engineering.

Entities:  

Keywords:  Brassicaceae; convergent evolution; cyclization mechanism; plant natural products; sesterterpene biosynthesis

Mesh:

Substances:

Year:  2017        PMID: 28673978      PMCID: PMC5530694          DOI: 10.1073/pnas.1705567114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   12.779


  48 in total

1.  Glandular trichomes of Leucosceptrum canum harbor defensive sesterterpenoids.

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Journal:  Angew Chem Int Ed Engl       Date:  2010-06-14       Impact factor: 15.336

2.  FastTree 2--approximately maximum-likelihood trees for large alignments.

Authors:  Morgan N Price; Paramvir S Dehal; Adam P Arkin
Journal:  PLoS One       Date:  2010-03-10       Impact factor: 3.240

3.  Antibiotics from basidiomycetes. XXXI. Aleurodiscal: an antifungal sesterterpenoid from Aleurodiscus mirabilis (Berk. & Curt.) Höhn.

Authors:  U Lauer; T Anke; W S Sheldrick; A Scherer; W Steglich
Journal:  J Antibiot (Tokyo)       Date:  1989-06       Impact factor: 2.649

4.  Draft Genome Sequence of Mentha longifolia and Development of Resources for Mint Cultivar Improvement.

Authors:  Kelly J Vining; Sean R Johnson; Amirhossein Ahkami; Iris Lange; Amber N Parrish; Susan C Trapp; Rodney B Croteau; Shannon C K Straub; Iovanna Pandelova; B Markus Lange
Journal:  Mol Plant       Date:  2016-11-17       Impact factor: 13.164

5.  Investigation of terpene diversification across multiple sequenced plant genomes.

Authors:  Alexander M Boutanaev; Tessa Moses; Jiachen Zi; David R Nelson; Sam T Mugford; Reuben J Peters; Anne Osbourn
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-10       Impact factor: 11.205

6.  Defensive sesterterpenoids with unusual antipodal cyclopentenones from the leaves of Leucosceptrum canum.

Authors:  Shi-Hong Luo; Lin-Hong Weng; Ming-Jin Xie; Xiao-Nian Li; Juan Hua; Xu Zhao; Sheng-Hong Li
Journal:  Org Lett       Date:  2011-03-10       Impact factor: 6.005

7.  Identification of ophiobolin F synthase by a genome mining approach: a sesterterpene synthase from Aspergillus clavatus.

Authors:  Ryota Chiba; Atsushi Minami; Katsuya Gomi; Hideaki Oikawa
Journal:  Org Lett       Date:  2013-01-16       Impact factor: 6.005

8.  Functional plasticity of paralogous diterpene synthases involved in conifer defense.

Authors:  Christopher I Keeling; Sabrina Weisshaar; Roy P C Lin; Jörg Bohlmann
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-15       Impact factor: 11.205

9.  Biochemical analysis of a multifunctional cytochrome P450 (CYP51) enzyme required for synthesis of antimicrobial triterpenes in plants.

Authors:  Katrin Geisler; Richard K Hughes; Frank Sainsbury; George P Lomonossoff; Martin Rejzek; Shirley Fairhurst; Carl-Erik Olsen; Mohammed Saddik Motawia; Rachel E Melton; Andrew M Hemmings; Søren Bak; Anne Osbourn
Journal:  Proc Natl Acad Sci U S A       Date:  2013-08-12       Impact factor: 11.205

10.  Identification of a Dolabellane Type Diterpene Synthase and other Root-Expressed Diterpene Synthases in Arabidopsis.

Authors:  Qiang Wang; Meirong Jia; Jung-Hyun Huh; Andrew Muchlinski; Reuben J Peters; Dorothea Tholl
Journal:  Front Plant Sci       Date:  2016-11-25       Impact factor: 5.753

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  34 in total

1.  Genome-wide detection and classification of terpene synthase genes in Aquilaria agallochum.

Authors:  Ankur Das; Khaleda Begum; Suraiya Akhtar; Raja Ahmed; Ram Kulkarni; Sofia Banu
Journal:  Physiol Mol Biol Plants       Date:  2021-08-05

2.  Genome-Wide Association Study With Growth-Related Traits and Secondary Metabolite Contents in Red- and White-Heart Chinese Fir.

Authors:  Sen Cao; Hongjing Duan; Yuhan Sun; Ruiyang Hu; Bo Wu; Jun Lin; Wenjian Deng; Yun Li; Huiquan Zheng
Journal:  Front Plant Sci       Date:  2022-06-30       Impact factor: 6.627

Review 3.  Genome Mining as New Challenge in Natural Products Discovery.

Authors:  Luisa Albarano; Roberta Esposito; Nadia Ruocco; Maria Costantini
Journal:  Mar Drugs       Date:  2020-04-09       Impact factor: 5.118

4.  Unusual and Highly Bioactive Sesterterpenes Synthesized by Pleurotus ostreatus during Coculture with Trametes robiniophila Murr.

Authors:  Xiao-Ting Shen; Xu-Hua Mo; Li-Ping Zhu; Ling-Ling Tan; Feng-Yu Du; Qian-Wen Wang; Yuan-Ming Zhou; Xiao-Jie Yuan; Bin Qiao; Song Yang
Journal:  Appl Environ Microbiol       Date:  2019-07-01       Impact factor: 4.792

5.  Gene-guided discovery and engineering of branched cyclic peptides in plants.

Authors:  Roland D Kersten; Jing-Ke Weng
Journal:  Proc Natl Acad Sci U S A       Date:  2018-10-29       Impact factor: 11.205

Review 6.  Isoprenyl diphosphate synthases: the chain length determining step in terpene biosynthesis.

Authors:  Raimund Nagel; Axel Schmidt; Reuben J Peters
Journal:  Planta       Date:  2018-11-22       Impact factor: 4.116

Review 7.  Mining genomes to illuminate the specialized chemistry of life.

Authors:  Marnix H Medema; Tristan de Rond; Bradley S Moore
Journal:  Nat Rev Genet       Date:  2021-06-03       Impact factor: 53.242

Review 8.  Mining and unearthing hidden biosynthetic potential.

Authors:  Kirstin Scherlach; Christian Hertweck
Journal:  Nat Commun       Date:  2021-06-23       Impact factor: 14.919

9.  Terzyme: a tool for identification and analysis of the plant terpenome.

Authors:  Piyush Priya; Archana Yadav; Jyoti Chand; Gitanjali Yadav
Journal:  Plant Methods       Date:  2018-01-10       Impact factor: 4.993

10.  Tropane alkaloids and terpenes synthase genes of Datura stramonium (Solanaceae).

Authors:  Sabina Velázquez-Márquez; Iván M De-la-Cruz; Rosalinda Tapia-López; Juan Núñez-Farfán
Journal:  PeerJ       Date:  2021-06-15       Impact factor: 2.984

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