Literature DB >> 28671818

An "EAR" on Environmental Surveillance and Monitoring: A Case Study on the Use of Exposure-Activity Ratios (EARs) to Prioritize Sites, Chemicals, and Bioactivities of Concern in Great Lakes Waters.

Brett R Blackwell1, Gerald T Ankley1, Steven R Corsi2, Laura A DeCicco2, Keith A Houck3, Richard S Judson3, Shibin Li1,4, Matthew T Martin3, Elizabeth Murphy5, Anthony L Schroeder6, Edwin R Smith5, Joe Swintek7, Daniel L Villeneuve1.   

Abstract

Current environmental monitoring approaches focus primarily on chemical occurrence. However, based on concentration alone, it can be difficult to identify which compounds may be of toxicological concern and should be prioritized for further monitoring, in-depth testing, or management. This can be problematic because toxicological characterization is lacking for many emerging contaminants. New sources of high-throughput screening (HTS) data, such as the ToxCast database, which contains information for over 9000 compounds screened through up to 1100 bioassays, are now available. Integrated analysis of chemical occurrence data with HTS data offers new opportunities to prioritize chemicals, sites, or biological effects for further investigation based on concentrations detected in the environment linked to relative potencies in pathway-based bioassays. As a case study, chemical occurrence data from a 2012 study in the Great Lakes Basin along with the ToxCast effects database were used to calculate exposure-activity ratios (EARs) as a prioritization tool. Technical considerations of data processing and use of the ToxCast database are presented and discussed. EAR prioritization identified multiple sites, biological pathways, and chemicals that warrant further investigation. Prioritized bioactivities from the EAR analysis were linked to discrete adverse outcome pathways to identify potential adverse outcomes and biomarkers for use in subsequent monitoring efforts.

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Year:  2017        PMID: 28671818      PMCID: PMC6132252          DOI: 10.1021/acs.est.7b01613

Source DB:  PubMed          Journal:  Environ Sci Technol        ISSN: 0013-936X            Impact factor:   9.028


  61 in total

Review 1.  Adverse outcome pathways: a conceptual framework to support ecotoxicology research and risk assessment.

Authors:  Gerald T Ankley; Richard S Bennett; Russell J Erickson; Dale J Hoff; Michael W Hornung; Rodney D Johnson; David R Mount; John W Nichols; Christine L Russom; Patricia K Schmieder; Jose A Serrrano; Joseph E Tietge; Daniel L Villeneuve
Journal:  Environ Toxicol Chem       Date:  2010-03       Impact factor: 3.742

2.  Identifying off-target effects and hidden phenotypes of drugs in human cells.

Authors:  Marnie L MacDonald; Jane Lamerdin; Stephen Owens; Brigitte H Keon; Graham K Bilter; Zhidi Shang; Zhengping Huang; Helen Yu; Jennifer Dias; Tomoe Minami; Stephen W Michnick; John K Westwick
Journal:  Nat Chem Biol       Date:  2006-05-07       Impact factor: 15.040

3.  Identification of novel micropollutants in wastewater by a combination of suspect and nontarget screening.

Authors:  Christine Hug; Nadin Ulrich; Tobias Schulze; Werner Brack; Martin Krauss
Journal:  Environ Pollut       Date:  2013-09-06       Impact factor: 8.071

4.  An integrated approach for identifying priority contaminant in the Great Lakes Basin - Investigations in the Lower Green Bay/Fox River and Milwaukee Estuary areas of concern.

Authors:  Shibin Li; Daniel L Villeneuve; Jason P Berninger; Brett R Blackwell; Jenna E Cavallin; Megan N Hughes; Kathleen M Jensen; Zachary Jorgenson; Michael D Kahl; Anthony L Schroeder; Kyle E Stevens; Linnea M Thomas; Matthew A Weberg; Gerald T Ankley
Journal:  Sci Total Environ       Date:  2016-11-18       Impact factor: 7.963

Review 5.  Molecular biology of steroid hormone synthesis.

Authors:  W L Miller
Journal:  Endocr Rev       Date:  1988-08       Impact factor: 19.871

6.  Phenotypic screening of the ToxCast chemical library to classify toxic and therapeutic mechanisms.

Authors:  Nicole C Kleinstreuer; Jian Yang; Ellen L Berg; Thomas B Knudsen; Ann M Richard; Matthew T Martin; David M Reif; Richard S Judson; Mark Polokoff; David J Dix; Robert J Kavlock; Keith A Houck
Journal:  Nat Biotechnol       Date:  2014-05-18       Impact factor: 54.908

7.  Impaired anterior swim bladder inflation following exposure to the thyroid peroxidase inhibitor 2-mercaptobenzothiazole part I: Fathead minnow.

Authors:  Krysta R Nelson; Anthony L Schroeder; Gerald T Ankley; Brett R Blackwell; Chad Blanksma; Sigmund J Degitz; Kevin M Flynn; Kathleen M Jensen; Rodney D Johnson; Michael D Kahl; Dries Knapen; Patricia A Kosian; Rebecca Y Milsk; Eric C Randolph; Travis Saari; Evelyn Stinckens; Lucia Vergauwen; Daniel L Villeneuve
Journal:  Aquat Toxicol       Date:  2016-01-07       Impact factor: 4.964

8.  Profiling bioactivity of the ToxCast chemical library using BioMAP primary human cell systems.

Authors:  Keith A Houck; David J Dix; Richard S Judson; Robert J Kavlock; Jian Yang; Ellen L Berg
Journal:  J Biomol Screen       Date:  2009-09-22

Review 9.  Manure-borne estrogens as potential environmental contaminants: a review.

Authors:  Travis A Hanselman; Donald A Graetz; Ann C Wilkie
Journal:  Environ Sci Technol       Date:  2003-12-15       Impact factor: 9.028

10.  Multidimensional in vivo hazard assessment using zebrafish.

Authors:  Lisa Truong; David M Reif; Lindsey St Mary; Mitra C Geier; Hao D Truong; Robert L Tanguay
Journal:  Toxicol Sci       Date:  2013-10-17       Impact factor: 4.849

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  23 in total

1.  Risk Characterization of Environmental Samples Using In Vitro Bioactivity and Polycyclic Aromatic Hydrocarbon Concentrations Data.

Authors:  Zunwei Chen; Dillon Lloyd; Yi-Hui Zhou; Weihsueh A Chiu; Fred A Wright; Ivan Rusyn
Journal:  Toxicol Sci       Date:  2021-01-06       Impact factor: 4.849

2.  The Next Generation Blueprint of Computational Toxicology at the U.S. Environmental Protection Agency.

Authors:  Russell S Thomas; Tina Bahadori; Timothy J Buckley; John Cowden; Chad Deisenroth; Kathie L Dionisio; Jeffrey B Frithsen; Christopher M Grulke; Maureen R Gwinn; Joshua A Harrill; Mark Higuchi; Keith A Houck; Michael F Hughes; E Sidney Hunter; Kristin K Isaacs; Richard S Judson; Thomas B Knudsen; Jason C Lambert; Monica Linnenbrink; Todd M Martin; Seth R Newton; Stephanie Padilla; Grace Patlewicz; Katie Paul-Friedman; Katherine A Phillips; Ann M Richard; Reeder Sams; Timothy J Shafer; R Woodrow Setzer; Imran Shah; Jane E Simmons; Steven O Simmons; Amar Singh; Jon R Sobus; Mark Strynar; Adam Swank; Rogelio Tornero-Valez; Elin M Ulrich; Daniel L Villeneuve; John F Wambaugh; Barbara A Wetmore; Antony J Williams
Journal:  Toxicol Sci       Date:  2019-06-01       Impact factor: 4.849

3.  The Adverse Outcome Pathway: A Multifaceted Framework Supporting 21st Century Toxicology.

Authors:  Gerald T Ankley; Stephen W Edwards
Journal:  Curr Opin Toxicol       Date:  2018-06-01

4.  Bioactive contaminants of emerging concern in National Park waters of the northern Colorado Plateau, USA.

Authors:  Rebecca H Weissinger; Brett R Blackwell; Kristen Keteles; William A Battaglin; Paul M Bradley
Journal:  Sci Total Environ       Date:  2018-05-02       Impact factor: 7.963

5.  Contaminants in bald eagles of the upper Midwestern U.S.: A framework for prioritizing future research based on in-vitro bioassays.

Authors:  Sarah M Elliott; William T Route; Laura A DeCicco; David D VanderMeulen; Steven R Corsi; Brett R Blackwell
Journal:  Environ Pollut       Date:  2018-10-24       Impact factor: 8.071

6.  Reconnaissance of Mixed Organic and Inorganic Chemicals in Private and Public Supply Tapwaters at Selected Residential and Workplace Sites in the United States.

Authors:  Paul M Bradley; Dana W Kolpin; Kristin M Romanok; Kelly L Smalling; Michael J Focazio; Juliane B Brown; Mary C Cardon; Kurt D Carpenter; Steven R Corsi; Laura A DeCicco; Julie E Dietze; Nicola Evans; Edward T Furlong; Carrie E Givens; James L Gray; Dale W Griffin; Christopher P Higgins; Michelle L Hladik; Luke R Iwanowicz; Celeste A Journey; Kathryn M Kuivila; Jason R Masoner; Carrie A McDonough; Michael T Meyer; James L Orlando; Mark J Strynar; Christopher P Weis; Vickie S Wilson
Journal:  Environ Sci Technol       Date:  2018-11-21       Impact factor: 9.028

7.  Differentiating Pathway-Specific From Nonspecific Effects in High-Throughput Toxicity Data: A Foundation for Prioritizing Adverse Outcome Pathway Development.

Authors:  Kellie A Fay; Daniel L Villeneuve; Joe Swintek; Stephen W Edwards; Mark D Nelms; Brett R Blackwell; Gerald T Ankley
Journal:  Toxicol Sci       Date:  2018-06-01       Impact factor: 4.849

8.  Potential Toxicity of Complex Mixtures in Surface Waters from a Nationwide Survey of United States Streams: Identifying in Vitro Bioactivities and Causative Chemicals.

Authors:  Brett R Blackwell; Gerald T Ankley; Paul M Bradley; Keith A Houck; Sergei S Makarov; Alexander V Medvedev; Joe Swintek; Daniel L Villeneuve
Journal:  Environ Sci Technol       Date:  2018-12-21       Impact factor: 9.028

9.  Implementing in vitro bioactivity data to modernize priority setting of chemical inventories.

Authors:  Marc A Beal; Matthew Gagne; Sunil A Kulkarni; Grace Patlewicz; Russell S Thomas; Tara S Barton-Maclaren
Journal:  ALTEX       Date:  2021-11-23       Impact factor: 6.043

10.  In vitro effects-based method and water quality screening model for use in pre- and post-distribution treated waters.

Authors:  Elizabeth Medlock Kakaley; Mary C Cardon; Nicola Evans; Luke R Iwanowicz; Joshua M Allen; Elizabeth Wagner; Katherine Bokenkamp; Susan D Richardson; Michael J Plewa; Paul M Bradley; Kristin M Romanok; Dana W Kolpin; Justin M Conley; L Earl Gray; Phillip C Hartig; Vickie S Wilson
Journal:  Sci Total Environ       Date:  2021-01-23       Impact factor: 7.963

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