| Literature DB >> 28659941 |
Gitishree Das1, Jayanta Kumar Patra1, Kwang-Hyun Baek2.
Abstract
Rice yield is subjected to severe losses due to adverse effect of a number of stress factors. The most effective method of controlling reduced crop production is utilization of host resistance. Recent technological advances have led to the improvement of DNA based molecular markers closely linked to genes or QTLs in rice chromosome that bestow tolerance to various types of abiotic stresses and resistance to biotic stress factors. Transfer of several genes with potential characteristics into a single genotype is possible through the process of marker assisted selection (MAS), which can quicken the advancement of tolerant/resistant cultivars in the lowest number of generations with the utmost precision through the process of gene pyramiding. Overall, this review presented various types of molecular tools including MAS that can be reasonable and environmental friendly approach for the improvement of abiotic and biotic stress resistant rice with enhanced quality.Entities:
Keywords: gene pyramiding; genome mapping; marker assisted selection; molecular markers; phenotype traits; physiological traits; rice
Year: 2017 PMID: 28659941 PMCID: PMC5469070 DOI: 10.3389/fpls.2017.00985
Source DB: PubMed Journal: Front Plant Sci ISSN: 1664-462X Impact factor: 5.753
Figure 1(A) Overview of marker assisted backcross breeding program; (B) Flow diagram depicting the gene pyramiding of multiple stress resistance (R) genes into a single line using marker assisted backcross breeding; and (C) Flow diagram of stresses affecting rice productivity.
Selected lists of genotypes improved by MAS; selected abiotic and biotic stress resistance genes/QTLs and linked markers; selected stresses, resistance genes/QTLs, and their donor parents.
| Pusa basmati I | Improved Pusa Basmati I | Bacterial blight ( | Kottapalli et al., |
| Samba Mahsuri (BPT-5204) | Improved Samba Mahsuri | Bacterial blight ( | Kottapalli et al., |
| Swarna | Swarna sub1 | Submergence (Sub1) | Nandi et al., |
| IR64 | IR64 Sub1 | Submergence (Sub1) | Reddy et al., |
| Pusa RH 10 | PRR78/IRBB60 | Rice blast ( | Singh et al., |
| Pusa RH 10 | Pusa 6A, Pusa 6B | Bacterial blight ( | Singh et al., |
| KMR3 Restorer | KMR3/IRBB60 | Shanti et al., | |
| Lalat | Improved Lalat | Bacterial blight | Dokku et al., |
| Tapaswini | Improved Tapaswini | Bacterial blight | Dokku et al., |
| Mangeumbye | Improved Mangeumbye | Bacterial blight ( | Suh et al., |
| PRR78 | Improved Pusa RH10 | Rice blast ( | Singh et al., |
| Wuyujing 3 | K01, K04 | Low-amylose content gene ( | Tao et al., |
| Submergence | SUB1BC2, RM464A, RZ698, C1232, RG381 and RG345 | Das and Rao, | |
| Salinity | RM8094, RM140, RM10745, RM10772 | Nejad et al., | |
| Drought | RM212, RM319, RM316, RM537 | Lin et al., | |
| Cold | RM231, RM1377, RM24545, RM3602 RM1211 | Jena et al., | |
| Heat | M4 | Ye et al., | |
| Gall midge | RM444, RM316, and RM219, RG476, RG329, RM547 | Biradar et al., | |
| Hopper burn | XNpb248 and RG457, RM589, RM5953, RM6217, BP-20-2, B121,RM6273, RM6775, RM5479 | Singh et al., | |
| BB | pTA248, AB9, RG103, Xa13p, RG136, O072000,CDO365, RG556, XNpb181, R1506-S12886, MP, XNpb181, Y5212L, C600, Y5212R, 16PFXa1/EcoRV, M5 | Ma et al., | |
| SB (sheath blight) | RM104, RM341, RM13, RM190, RM245 | Liu et al., | |
| RB (rice blast) | RZ536, RG64, RG869, S04G03, AP4007, AP5930 RG498, RG788, RG103A, RG16, RRF6, RZ213, RZ123, G1234, RM206, Os04g0401000, YCA72 | Cho et al., | |
| TG (Tungro) | RTSV | RZ262 | Khondker et al., |
| Deep roots | QTLs on chromosomes 1, 2, 7 and 9 | RFLP and SSR markers | Hasan et al., |
| Root traits C Aroma | QTLs on chromosomes 2, 7, 8, 9 and 11 | RFLP and SSR markers | Hasan et al., |
| Heading date | QTLs for heading date (Hd1,Hd4, Hd5, or Hd6) | RFLP, STS, SSR, CAPS, dCAPs | Hasan et al., |
| Quality | Waxy | RFLP | Hasan et al., |
| Eating quality | Amylose content gene | RM190 | Jairin et al., |
| Fragrance | Fragrance gene | BO3_127.8 | Jairin et al., |
| High yield | Os01g0197700, Os06g0665400, Os08g0509600 | Ashikari et al., | |
| Seed shape | Os02g0244100, Os03g0407400, Os05g0187500 | Song et al., | |
| Bacterial blight | Kogyku, Tetep, Chogoku 45, IR20, IR1545-339, CAS209, | Swamy et al., | |
| Rice blast | LAC23, 5173, Tetep, IRAT13, Moroberekan, Zhiyeqing, C1O1A51, | Hayashi et al., | |
| Gall midge | Kavya, Siam 29, Abhaya, ARC5984, Duokang #1, Bhumansan, NHTA 8, Banglei | Jain et al., | |
| RTSV and GLH | Taipei 309-147.4 and Taipei 309-147.8, ARC11554, Pankhari 203, ASD7, IR8, Ptb8, Tightly linked to XNpb144, Tightly linked to G1465 | Khondker et al., | |
| BPH | Mudgo, ASD7, Rathu Heenati, Babawee, ARC10550, Swarnalata, T12, Chin Saba, pokkali, | Sun et al., | |
| Drought | Nagina 22 | Reddy et al., | |
| Submergence | FR13A, Swarna sub1, IR64 sub1, FR43B, Kurkurappan and Thavalu | Endang et al., | |
| Salinity | FL496, FL478, FL378, Pokkali, SR26B, Patnai 23, Vytilla 1 | Reddy et al., | |
| Eating quality | Low-amylose content gene Wx-mq | Kanto 194 | Tao et al., |