Literature DB >> 28634235

Mechanistic elucidation of the mycofactocin-biosynthetic radical S-adenosylmethionine protein, MftC.

Bulat Khaliullin1, Richard Ayikpoe1, Mason Tuttle1, John A Latham2.   

Abstract

Ribosomally synthesized and posttranslationally modified peptide (RiPP) pathways produce a diverse array of natural products. A subset of these pathways depends on radical S-adenosylmethionine proteins to modify the RiPP-produced peptide. Mycofactocin biosynthesis is one example of an S-adenosylmethionine protein-dependent RiPP pathway. Recently, it has been shown that MftC catalyzes the oxidative decarboxylation of the C-terminal tyrosine (Tyr-30) on the mycofactocin precursor peptide MftA; however, this product has not been verified by techniques other than MS. Herein, we provide a more detailed study of MftC catalysis and report a revised mechanism for MftC chemistry. We show that MftC catalyzes the formation of two isomeric products. Using a combination of MS, isotope labeling, and 1H and 13C NMR techniques, we established that the major product, MftA*, is a tyramine-valine-cross-linked peptide formed by MftC through two S-adenosylmethionine-dependent turnovers. In addition, we show that the hydroxyl group on MftA Tyr-30 is required for MftC catalysis. Furthermore, we show that a substitution in the penultimate MftA Val-29 position causes the accumulation of an MftA** minor product. The 1H NMR spectrum indicates that this minor product contains an αβ-unsaturated bond that likely arises from an aborted intermediate of MftA* synthesis. The finding that MftA* is the major product formed during MftC catalysis could have implications for the further elucidation of mycofactocin biosynthesis.
© 2017 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  MftC; S-adenosylmethionine (SAM); enzyme mechanism; iron-sulfur protein; mycofactocin; peptide biosynthesis; radical

Mesh:

Substances:

Year:  2017        PMID: 28634235      PMCID: PMC5546040          DOI: 10.1074/jbc.M117.795682

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  25 in total

1.  Prediction of 1H NMR chemical shifts using neural networks.

Authors:  João Aires-de-Sousa; Markus C Hemmer; Johann Gasteiger
Journal:  Anal Chem       Date:  2002-01-01       Impact factor: 6.986

2.  Synthesis of secondary enamides by ruthenium-catalyzed selective addition of amides to terminal alkynes.

Authors:  Lukas J Goossen; Kifah S M Salih; Mathieu Blanchot
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

3.  PqqD is a novel peptide chaperone that forms a ternary complex with the radical S-adenosylmethionine protein PqqE in the pyrroloquinoline quinone biosynthetic pathway.

Authors:  John A Latham; Anthony T Iavarone; Ian Barr; Prerak V Juthani; Judith P Klinman
Journal:  J Biol Chem       Date:  2015-03-27       Impact factor: 5.157

4.  SkfB Abstracts a Hydrogen Atom from Cα on SkfA To Initiate Thioether Cross-Link Formation.

Authors:  Nathan A Bruender; Vahe Bandarian
Journal:  Biochemistry       Date:  2016-07-21       Impact factor: 3.162

5.  Thioether bond formation by SPASM domain radical SAM enzymes: Cα H-atom abstraction in subtilosin A biosynthesis.

Authors:  Alhosna Benjdia; Alain Guillot; Benjamin Lefranc; Hubert Vaudry; Jérôme Leprince; Olivier Berteau
Journal:  Chem Commun (Camb)       Date:  2016-04-18       Impact factor: 6.222

6.  Two [4Fe-4S] clusters containing radical SAM enzyme SkfB catalyze thioether bond formation during the maturation of the sporulation killing factor.

Authors:  Leif Flühe; Olaf Burghaus; Beata M Wieckowski; Tobias W Giessen; Uwe Linne; Mohamed A Marahiel
Journal:  J Am Chem Soc       Date:  2013-01-09       Impact factor: 15.419

7.  Biochemical and Spectroscopic Characterization of a Radical S-Adenosyl-L-methionine Enzyme Involved in the Formation of a Peptide Thioether Cross-Link.

Authors:  Nathan A Bruender; Jarett Wilcoxen; R David Britt; Vahe Bandarian
Journal:  Biochemistry       Date:  2016-04-01       Impact factor: 3.162

8.  Bioinformatic evidence for a widely distributed, ribosomally produced electron carrier precursor, its maturation proteins, and its nicotinoprotein redox partners.

Authors:  Daniel H Haft
Journal:  BMC Genomics       Date:  2011-01-11       Impact factor: 3.969

9.  Structure and biosynthesis of a macrocyclic peptide containing an unprecedented lysine-to-tryptophan crosslink.

Authors:  Kelsey R Schramma; Leah B Bushin; Mohammad R Seyedsayamdost
Journal:  Nat Chem       Date:  2015-04-20       Impact factor: 24.427

10.  Mycofactocin-associated mycobacterial dehydrogenases with non-exchangeable NAD cofactors.

Authors:  Daniel H Haft; Phillip G Pierce; Stephen J Mayclin; Amy Sullivan; Anna S Gardberg; Jan Abendroth; Darren W Begley; Isabelle Q Phan; Bart L Staker; Peter J Myler; Vasilios M Marathias; Donald D Lorimer; Thomas E Edwards
Journal:  Sci Rep       Date:  2017-01-25       Impact factor: 4.379

View more
  28 in total

1.  Electron Paramagnetic Resonance Spectroscopic Identification of the Fe-S Clusters in the SPASM Domain-Containing Radical SAM Enzyme PqqE.

Authors:  Lizhi Tao; Wen Zhu; Judith P Klinman; R David Britt
Journal:  Biochemistry       Date:  2019-12-11       Impact factor: 3.162

2.  Spectroscopic and Electrochemical Characterization of the Mycofactocin Biosynthetic Protein, MftC, Provides Insight into Its Redox Flipping Mechanism.

Authors:  Richard Ayikpoe; Thacien Ngendahimana; Michelle Langton; Sheila Bonitatibus; Lindsey M Walker; Sandra S Eaton; Gareth R Eaton; Maria-Eirini Pandelia; Sean J Elliott; John A Latham
Journal:  Biochemistry       Date:  2019-01-25       Impact factor: 3.162

Review 3.  Occurrence, function, and biosynthesis of mycofactocin.

Authors:  Richard Ayikpoe; Vishnu Govindarajan; John A Latham
Journal:  Appl Microbiol Biotechnol       Date:  2019-02-18       Impact factor: 4.813

Review 4.  Formation and Cleavage of C-C Bonds by Enzymatic Oxidation-Reduction Reactions.

Authors:  F Peter Guengerich; Francis K Yoshimoto
Journal:  Chem Rev       Date:  2018-06-22       Impact factor: 60.622

Review 5.  Biocatalytic hydrogen atom transfer: an invigorating approach to free-radical reactions.

Authors:  Yuji Nakano; Kyle F Biegasiewicz; Todd K Hyster
Journal:  Curr Opin Chem Biol       Date:  2018-09-27       Impact factor: 8.822

Review 6.  Introduction to Metals in Biology 2018: Copper homeostasis and utilization in redox enzymes.

Authors:  F Peter Guengerich
Journal:  J Biol Chem       Date:  2018-02-07       Impact factor: 5.157

Review 7.  At the confluence of ribosomally synthesized peptide modification and radical S-adenosylmethionine (SAM) enzymology.

Authors:  John A Latham; Ian Barr; Judith P Klinman
Journal:  J Biol Chem       Date:  2017-08-22       Impact factor: 5.157

8.  Bioinformatic Mapping of Radical S-Adenosylmethionine-Dependent Ribosomally Synthesized and Post-Translationally Modified Peptides Identifies New Cα, Cβ, and Cγ-Linked Thioether-Containing Peptides.

Authors:  Graham A Hudson; Brandon J Burkhart; Adam J DiCaprio; Christopher J Schwalen; Bryce Kille; Taras V Pogorelov; Douglas A Mitchell
Journal:  J Am Chem Soc       Date:  2019-05-13       Impact factor: 15.419

Review 9.  Radical S-Adenosylmethionine Enzymes Involved in RiPP Biosynthesis.

Authors:  Nilkamal Mahanta; Graham A Hudson; Douglas A Mitchell
Journal:  Biochemistry       Date:  2017-09-22       Impact factor: 3.162

10.  MftD Catalyzes the Formation of a Biologically Active Redox Center in the Biosynthesis of the Ribosomally Synthesized and Post-translationally Modified Redox Cofactor Mycofactocin.

Authors:  Richard S Ayikpoe; John A Latham
Journal:  J Am Chem Soc       Date:  2019-08-15       Impact factor: 15.419

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.