Literature DB >> 27007615

Biochemical and Spectroscopic Characterization of a Radical S-Adenosyl-L-methionine Enzyme Involved in the Formation of a Peptide Thioether Cross-Link.

Nathan A Bruender1, Jarett Wilcoxen2, R David Britt2, Vahe Bandarian1.   

Abstract

Peptide-derived natural products are a class of metabolites that afford the producing organism a selective advantage over other organisms in their biological niche. While the polypeptide antibiotics produced by the nonribosomal polypeptide synthetases (NRPS) are the most widely recognized, the ribosomally synthesized and post-translationally modified peptides (RiPPs) are an emerging group of natural products with diverse structures and biological functions. Both the NRPS derived peptides and the RiPPs undergo extensive post-translational modifications to produce structural diversity. Here we report the first characterization of the six cysteines in forty-five (SCIFF) [Haft, D. H. and Basu M. K. (2011) J. Bacteriol. 193, 2745-2755] peptide maturase Tte1186, which is a member of the radical S-adenosyl-l-methionine (SAM) superfamily. Tte1186 catalyzes the formation of a thioether cross-link in the peptide Tte1186a encoded by an orf located upstream of the maturase, under reducing conditions in the presence of SAM. Tte1186 contains three [4Fe-4S] clusters that are indispensable for thioether cross-link formation; however, only one cluster catalyzes the reductive cleavage of SAM. Mechanistic imperatives for the reaction catalyzed by the thioether forming radical SAM maturases will be discussed.

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Year:  2016        PMID: 27007615      PMCID: PMC4829460          DOI: 10.1021/acs.biochem.6b00145

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  63 in total

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4.  Two [4Fe-4S] clusters containing radical SAM enzyme SkfB catalyze thioether bond formation during the maturation of the sporulation killing factor.

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Journal:  J Am Chem Soc       Date:  2013-01-09       Impact factor: 15.419

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6.  In vitro characterization of AtsB, a radical SAM formylglycine-generating enzyme that contains three [4Fe-4S] clusters.

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Journal:  Biochemistry       Date:  2008-06-18       Impact factor: 3.162

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8.  Structure of subtilosin A, a cyclic antimicrobial peptide from Bacillus subtilis with unusual sulfur to alpha-carbon cross-links: formation and reduction of alpha-thio-alpha-amino acid derivatives.

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Journal:  Biochemistry       Date:  2004-03-30       Impact factor: 3.162

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Authors:  Weixin Tang; Gonzalo Jiménez-Osés; K N Houk; Wilfred A van der Donk
Journal:  Nat Chem       Date:  2014-11-24       Impact factor: 24.427

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Journal:  Nucleic Acids Res       Date:  2014-11-26       Impact factor: 16.971

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  32 in total

1.  Electron Paramagnetic Resonance Spectroscopic Identification of the Fe-S Clusters in the SPASM Domain-Containing Radical SAM Enzyme PqqE.

Authors:  Lizhi Tao; Wen Zhu; Judith P Klinman; R David Britt
Journal:  Biochemistry       Date:  2019-12-11       Impact factor: 3.162

2.  Mechanistic elucidation of the mycofactocin-biosynthetic radical S-adenosylmethionine protein, MftC.

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Journal:  J Biol Chem       Date:  2017-06-20       Impact factor: 5.157

3.  Spectroscopic and Electrochemical Characterization of the Mycofactocin Biosynthetic Protein, MftC, Provides Insight into Its Redox Flipping Mechanism.

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Journal:  Biochemistry       Date:  2019-01-25       Impact factor: 3.162

Review 4.  Occurrence, function, and biosynthesis of mycofactocin.

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Journal:  Appl Microbiol Biotechnol       Date:  2019-02-18       Impact factor: 4.813

5.  The unusual structure of Ruminococcin C1 antimicrobial peptide confers clinical properties.

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7.  The Creatininase Homolog MftE from Mycobacterium smegmatis Catalyzes a Peptide Cleavage Reaction in the Biosynthesis of a Novel Ribosomally Synthesized Post-translationally Modified Peptide (RiPP).

Authors:  Nathan A Bruender; Vahe Bandarian
Journal:  J Biol Chem       Date:  2017-01-11       Impact factor: 5.157

8.  Reconstitution and Substrate Specificity of the Thioether-Forming Radical S-Adenosylmethionine Enzyme in Freyrasin Biosynthesis.

Authors:  Timothy W Precord; Nilkamal Mahanta; Douglas A Mitchell
Journal:  ACS Chem Biol       Date:  2019-09-09       Impact factor: 5.100

9.  SkfB Abstracts a Hydrogen Atom from Cα on SkfA To Initiate Thioether Cross-Link Formation.

Authors:  Nathan A Bruender; Vahe Bandarian
Journal:  Biochemistry       Date:  2016-07-21       Impact factor: 3.162

10.  Bioinformatic Mapping of Radical S-Adenosylmethionine-Dependent Ribosomally Synthesized and Post-Translationally Modified Peptides Identifies New Cα, Cβ, and Cγ-Linked Thioether-Containing Peptides.

Authors:  Graham A Hudson; Brandon J Burkhart; Adam J DiCaprio; Christopher J Schwalen; Bryce Kille; Taras V Pogorelov; Douglas A Mitchell
Journal:  J Am Chem Soc       Date:  2019-05-13       Impact factor: 15.419

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