Literature DB >> 28607990

Reaction intermediates in the heme degradation reaction by HutZ from Vibrio cholerae.

Takeshi Uchida1, Yukari Sekine, Nobuhiko Dojun, Ariel Lewis-Ballester, Izumi Ishigami, Toshitaka Matsui, Syun-Ru Yeh, Koichiro Ishimori.   

Abstract

HutZ is a heme-degrading enzyme in Vibrio cholerae. It converts heme to biliverdin via verdoheme, suggesting that it follows the same reaction mechanism as that of mammalian heme oxygenase. However, none of the key intermediates have been identified. In this study, we applied steady-state and time-resolved UV-vis absorption and resonance Raman spectroscopy to study the reaction of the heme-HutZ complex with H2O2 or ascorbic acid. We characterized three intermediates: oxyferrous heme, meso-hydroxyheme, and verdoheme complexes. Our data support the view that HutZ degrades heme in a manner similar to mammalian heme oxygenase, despite their low sequence and structural homology.

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Year:  2017        PMID: 28607990      PMCID: PMC5876723          DOI: 10.1039/c7dt01562c

Source DB:  PubMed          Journal:  Dalton Trans        ISSN: 1477-9226            Impact factor:   4.390


  29 in total

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Authors:  A Bruha; J R Kincaid
Journal:  J Am Chem Soc       Date:  1988-08-01       Impact factor: 15.419

2.  Roles of distal Asp in heme oxygenase from Corynebacterium diphtheriae, HmuO: A water-driven oxygen activation mechanism.

Authors:  Toshitaka Matsui; Momoko Furukawa; Masaki Unno; Takeshi Tomita; Masao Ikeda-Saito
Journal:  J Biol Chem       Date:  2004-11-04       Impact factor: 5.157

3.  A role for highly conserved carboxylate, aspartate-140, in oxygen activation and heme degradation by heme oxygenase-1.

Authors:  H Fujii; X Zhang; T Tomita; M Ikeda-Saito; T Yoshida
Journal:  J Am Chem Soc       Date:  2001-07-11       Impact factor: 15.419

4.  Evidence for a ferryl intermediate in a heme-based dioxygenase.

Authors:  Ariel Lewis-Ballester; Dipanwita Batabyal; Tsuyoshi Egawa; Changyuan Lu; Yu Lin; Marcelo A Marti; Luciana Capece; Dario A Estrin; Syun-Ru Yeh
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-29       Impact factor: 11.205

5.  A Dye-Decolorizing Peroxidase from Vibrio cholerae.

Authors:  Takeshi Uchida; Miho Sasaki; Yoshikazu Tanaka; Koichiro Ishimori
Journal:  Biochemistry       Date:  2015-10-13       Impact factor: 3.162

6.  Heme degradation as catalyzed by a recombinant bacterial heme oxygenase (Hmu O) from Corynebacterium diphtheriae.

Authors:  G C Chu; K Katakura; X Zhang; T Yoshida; M Ikeda-Saito
Journal:  J Biol Chem       Date:  1999-07-23       Impact factor: 5.157

7.  Folding of cytochrome c initiated by submillisecond mixing.

Authors:  S Takahashi; S R Yeh; T K Das; C K Chan; D S Gottfried; D L Rousseau
Journal:  Nat Struct Biol       Date:  1997-01

8.  HutZ is required for efficient heme utilization in Vibrio cholerae.

Authors:  Elizabeth E Wyckoff; Michael Schmitt; Angela Wilks; Shelley M Payne
Journal:  J Bacteriol       Date:  2004-07       Impact factor: 3.490

9.  Structures of the substrate-free and product-bound forms of HmuO, a heme oxygenase from corynebacterium diphtheriae: x-ray crystallography and molecular dynamics investigation.

Authors:  Masaki Unno; Albert Ardèvol; Carme Rovira; Masao Ikeda-Saito
Journal:  J Biol Chem       Date:  2013-10-08       Impact factor: 5.157

10.  Unique coupling of mono- and dioxygenase chemistries in a single active site promotes heme degradation.

Authors:  Toshitaka Matsui; Shusuke Nambu; Celia W Goulding; Satoshi Takahashi; Hiroshi Fujii; Masao Ikeda-Saito
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-22       Impact factor: 11.205

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  3 in total

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Authors:  Toshitaka Matsui; Ryota Sugiyama; Kenta Sakanashi; Yoko Tamura; Masaki Iida; Yukari Nambu; Tsunehiko Higuchi; Makoto Suematsu; Masao Ikeda-Saito
Journal:  J Biol Chem       Date:  2018-09-20       Impact factor: 5.157

2.  A noncanonical heme oxygenase specific for the degradation of c-type heme.

Authors:  Shuxin Li; Eta A Isiorho; Victoria L Owens; Patrick H Donnan; Chidinma L Odili; Steven O Mansoorabadi
Journal:  J Biol Chem       Date:  2021-04-13       Impact factor: 5.157

3.  The Cytochrome P450 OxyA from the Kistamicin Biosynthesis Cyclization Cascade is Highly Sensitive to Oxidative Damage.

Authors:  Anja Greule; Thierry Izoré; Daniel Machell; Mathias H Hansen; Melanie Schoppet; James J De Voss; Louise K Charkoudian; Ralf B Schittenhelm; Jeffrey R Harmer; Max J Cryle
Journal:  Front Chem       Date:  2022-04-08       Impact factor: 5.545

  3 in total

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