Literature DB >> 28603294

Tautomeric stabilities of 4-fluorohistidine shed new light on mechanistic experiments with labeled ribonuclease A.

Chandana Kasireddy1, Jonathan M Ellis1, James G Bann1, Katie R Mitchell-Koch1.   

Abstract

Ribonuclease A is the oldest model for studying enzymatic mechanisms, yet questions remain about proton transfer within the active site. Seminal work by Jackson et al. (Science, 1994) labeled Ribonuclease A with 4-fluorohistidine, concluding that active-site histidines act as general acids and bases. Calculations of 4-fluorohistidine indicate that the π-tautomer is predominant in all simulated environments (by ~17 kJ/mol), strongly suggesting that fluoro-labeled ribonuclease A functions with His119 in π-tautomer. The tautomeric form of His119 during proton transfer and tautomerism as a putative mechanistic step in wild-type RNase A remain open questions and should be considered in future mechanistic studies.

Entities:  

Keywords:  Fluorinated amino acids; RNA hydrolysis; enzymatic mechanism; histidine; tautomerization

Year:  2016        PMID: 28603294      PMCID: PMC5461937          DOI: 10.1016/j.cplett.2016.10.072

Source DB:  PubMed          Journal:  Chem Phys Lett        ISSN: 0009-2614            Impact factor:   2.328


  35 in total

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Authors:  Nicolas Doucet; Eric D Watt; J Patrick Loria
Journal:  Biochemistry       Date:  2009-08-04       Impact factor: 3.162

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Journal:  J Am Chem Soc       Date:  2014-01-10       Impact factor: 15.419

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  1 in total

1.  Evaluating electronic structure methods for accurate calculation of 19 F chemical shifts in fluorinated amino acids.

Authors:  Jayangika N Dahanayake; Chandana Kasireddy; Jonathan M Ellis; Derek Hildebrandt; Olivia A Hull; Joseph P Karnes; Dylan Morlan; Katie R Mitchell-Koch
Journal:  J Comput Chem       Date:  2017-08-21       Impact factor: 3.376

  1 in total

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