Literature DB >> 28591671

Mille viae in eukaryotic mRNA decapping.

Eugene Valkov1, Stefanie Jonas2, Oliver Weichenrieder3.   

Abstract

Cellular mRNA levels are regulated via rates of transcription and decay. Since the removal of the mRNA 5'-cap by the decapping enzyme DCP2 is generally an irreversible step towards decay, it requires regulation. Control of DCP2 activity is likely effected by two interdependent means: by conformational control of the DCP2-DCP1 complex, and by assembly control of the decapping network, an array of mutually interacting effector proteins. Here, we compare three recent and conformationally distinct crystal structures of the DCP2-DCP1 decapping complex in the presence of substrate analogs and decapping enhancers and we discuss alternative substrate recognition modes for the catalytic domain of DCP2. Together with structure-based insight into decapping network assembly, we propose that DCP2-mediated decapping follows more than one path.
Copyright © 2017 Elsevier Ltd. All rights reserved.

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Year:  2017        PMID: 28591671     DOI: 10.1016/j.sbi.2017.05.009

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  11 in total

Review 1.  The Interplay between the RNA Decay and Translation Machinery in Eukaryotes.

Authors:  Adam M Heck; Jeffrey Wilusz
Journal:  Cold Spring Harb Perspect Biol       Date:  2018-05-01       Impact factor: 10.005

2.  Dcp2 C-terminal cis-binding elements control selective targeting of the decapping enzyme by forming distinct decapping complexes.

Authors:  Feng He; Chan Wu; Allan Jacobson
Journal:  Elife       Date:  2022-05-23       Impact factor: 8.713

Review 3.  Structural and molecular mechanisms for the control of eukaryotic 5'-3' mRNA decay.

Authors:  Jeffrey S Mugridge; Jeff Coller; John D Gross
Journal:  Nat Struct Mol Biol       Date:  2018-12-05       Impact factor: 15.369

4.  General decapping activators target different subsets of inefficiently translated mRNAs.

Authors:  Feng He; Alper Celik; Chan Wu; Allan Jacobson
Journal:  Elife       Date:  2018-12-06       Impact factor: 8.140

5.  Direct role for the Drosophila GIGYF protein in 4EHP-mediated mRNA repression.

Authors:  Vincenzo Ruscica; Praveen Bawankar; Daniel Peter; Sigrun Helms; Cátia Igreja; Elisa Izaurralde
Journal:  Nucleic Acids Res       Date:  2019-07-26       Impact factor: 16.971

6.  A low-complexity region in human XRN1 directly recruits deadenylation and decapping factors in 5'-3' messenger RNA decay.

Authors:  Chung-Te Chang; Sowndarya Muthukumar; Ramona Weber; Yevgen Levdansky; Ying Chen; Dipankar Bhandari; Catia Igreja; Lara Wohlbold; Eugene Valkov; Elisa Izaurralde
Journal:  Nucleic Acids Res       Date:  2019-09-26       Impact factor: 16.971

7.  Structures of MERS1, the 5' processing enzyme of mitochondrial mRNAs in Trypanosoma brucei.

Authors:  Maria A Schumacher; Max Henderson; Wenjie Zeng
Journal:  RNA       Date:  2019-11-08       Impact factor: 4.942

Review 8.  Dcp2: an mRNA decapping enzyme that adopts many different shapes and forms.

Authors:  Jan Philip Wurm; Remco Sprangers
Journal:  Curr Opin Struct Biol       Date:  2019-08-29       Impact factor: 6.809

9.  Structure of the activated Edc1-Dcp1-Dcp2-Edc3 mRNA decapping complex with substrate analog poised for catalysis.

Authors:  Jeffrey S Mugridge; Ryan W Tibble; Marcin Ziemniak; Jacek Jemielity; John D Gross
Journal:  Nat Commun       Date:  2018-03-20       Impact factor: 14.919

10.  Hydrolytic activity of human Nudt16 enzyme on dinucleotide cap analogs and short capped oligonucleotides.

Authors:  Renata Grzela; Karolina Nasilowska; Maciej Lukaszewicz; Michal Tyras; Janusz Stepinski; Marzena Jankowska-Anyszka; Elzbieta Bojarska; Edward Darzynkiewicz
Journal:  RNA       Date:  2018-02-26       Impact factor: 4.942

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