Literature DB >> 28585570

Data management and best practice for plant science.

Sabina Leonelli1,2, Robert P Davey3, Elizabeth Arnaud4, Geraint Parry5, Ruth Bastow5,6.   

Abstract

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Year:  2017        PMID： 28585570     DOI： 10.1038/nplants.2017.86

Source DB:  PubMed          Journal:  Nat Plants        ISSN： 2055-0278            Impact factor:   15.793


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  12 in total

Review 1.  Pharmacognosy in the digital era: shifting to contextualized metabolomics.

Authors:  Pierre-Marie Allard; Jonathan Bisson; Antonio Azzollini; Guido F Pauli; Geoffrey A Cordell; Jean-Luc Wolfender
Journal:  Curr Opin Biotechnol       Date:  2018-02-27       Impact factor: 9.740

2.  Data-driven decentralized breeding increases prediction accuracy in a challenging crop production environment.

Authors:  Kauê de Sousa; Jacob van Etten; Jesse Poland; Carlo Fadda; Jean-Luc Jannink; Yosef Gebrehawaryat Kidane; Basazen Fantahun Lakew; Dejene Kassahun Mengistu; Mario Enrico Pè; Svein Øivind Solberg; Matteo Dell'Acqua
Journal:  Commun Biol       Date:  2021-08-19

Review 3.  Modernising breeding for orphan crops: tools, methodologies, and beyond.

Authors:  Jean-Marcel Ribaut; Michel Ragot
Journal:  Planta       Date:  2019-06-29       Impact factor: 4.116

4.  Conversion of array-based single nucleotide polymorphic markers for use in targeted genotyping by sequencing in hexaploid wheat (Triticum aestivum).

Authors:  Amanda J Burridge; Paul A Wilkinson; Mark O Winfield; Gary L A Barker; Alexandra M Allen; Jane A Coghill; Christy Waterfall; Keith J Edwards
Journal:  Plant Biotechnol J       Date:  2017-10-23       Impact factor: 9.803

5.  Agronomic Linked Data (AgroLD): A knowledge-based system to enable integrative biology in agronomy.

Authors:  Aravind Venkatesan; Gildas Tagny Ngompe; Nordine El Hassouni; Imene Chentli; Valentin Guignon; Clement Jonquet; Manuel Ruiz; Pierre Larmande
Journal:  PLoS One       Date:  2018-11-30       Impact factor: 3.240

6.  Dealing with multi-source and multi-scale information in plant phenomics: the ontology-driven Phenotyping Hybrid Information System.

Authors:  Pascal Neveu; Anne Tireau; Nadine Hilgert; Vincent Nègre; Jonathan Mineau-Cesari; Nicolas Brichet; Romain Chapuis; Isabelle Sanchez; Cyril Pommier; Brigitte Charnomordic; François Tardieu; Llorenç Cabrera-Bosquet
Journal:  New Phytol       Date:  2018-08-28       Impact factor: 10.151

7.  The on-premise data sharing infrastructure e!DAL: Foster FAIR data for faster data acquisition.

Authors:  Daniel Arend; Patrick König; Astrid Junker; Uwe Scholz; Matthias Lange
Journal:  Gigascience       Date:  2020-10-22       Impact factor: 6.524

8.  The Ontologies Community of Practice: A CGIAR Initiative for Big Data in Agrifood Systems.

Authors:  Elizabeth Arnaud; Marie-Angélique Laporte; Soonho Kim; Céline Aubert; Sabina Leonelli; Berta Miro; Laurel Cooper; Pankaj Jaiswal; Gideon Kruseman; Rosemary Shrestha; Pier Luigi Buttigieg; Christopher J Mungall; Julian Pietragalla; Afolabi Agbona; Jacqueline Muliro; Jeffrey Detras; Vilma Hualla; Abhishek Rathore; Roma Rani Das; Ibnou Dieng; Guillaume Bauchet; Naama Menda; Cyril Pommier; Felix Shaw; David Lyon; Leroy Mwanzia; Henry Juarez; Enrico Bonaiuti; Brian Chiputwa; Olatunbosun Obileye; Sandrine Auzoux; Esther Dzalé Yeumo; Lukas A Mueller; Kevin Silverstein; Alexandra Lafargue; Erick Antezana; Medha Devare; Brian King
Journal:  Patterns (N Y)       Date:  2020-09-25

9.  Machado: Open source genomics data integration framework.

Authors:  Mauricio de Alvarenga Mudadu; Adhemar Zerlotini
Journal:  Gigascience       Date:  2020-09-14       Impact factor: 6.524

10.  How to build an effective research network: lessons from two decades of the GARNet plant science community.

Authors:  Geraint Parry; Yoselin Benitez-Alfonso; Daniel J Gibbs; Murray Grant; Andrea Harper; C Jill Harrison; Eirini Kaiserli; Sabina Leonelli; Sean May; Sarah McKim; Steven Spoel; Colin Turnbull; Renier A L van der Hoorn; James Murray
Journal:  J Exp Bot       Date:  2020-12-31       Impact factor: 6.992
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