Literature DB >> 28584625

Digital pathology imaging as a novel platform for standardization and globalization of quantitative nephropathology.

Laura Barisoni1, Charlotte Gimpel2, Renate Kain3, Arvydas Laurinavicius4, Gloria Bueno5, Caihong Zeng6, Zhihong Liu6, Franz Schaefer7, Matthias Kretzler8, Lawrence B Holzman9, Stephen M Hewitt10.   

Abstract

The introduction of digital pathology to nephrology provides a platform for the development of new methodologies and protocols for visual, morphometric and computer-aided assessment of renal biopsies. Application of digital imaging to pathology made substantial progress over the past decade; it is now in use for education, clinical trials and translational research. Digital pathology evolved as a valuable tool to generate comprehensive structural information in digital form, a key prerequisite for achieving precision pathology for computational biology. The application of this new technology on an international scale is driving novel methods for collaborations, providing unique opportunities but also challenges. Standardization of methods needs to be rigorously evaluated and applied at each step, from specimen processing to scanning, uploading into digital repositories, morphologic, morphometric and computer-aided assessment, data collection and analysis. In this review, we discuss the status and opportunities created by the application of digital imaging to precision nephropathology, and present a vision for the near future.

Entities:  

Keywords:  glomerulosclerosis; kidney biopsy; minimal change disease; nephrotic syndrome; proteinuria

Year:  2017        PMID: 28584625      PMCID: PMC5455257          DOI: 10.1093/ckj/sfw129

Source DB:  PubMed          Journal:  Clin Kidney J        ISSN: 2048-8505


  49 in total

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Journal:  Transplantation       Date:  2001-06-15       Impact factor: 4.939

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Journal:  Nature       Date:  2015-10-08       Impact factor: 49.962

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Authors:  Yukako Yagi; John R Gilbertson
Journal:  J Telemed Telecare       Date:  2005       Impact factor: 6.184

4.  Observer variability in the interpretation of HER2/neu immunohistochemical expression with unaided and computer-aided digital microscopy.

Authors:  Marios A Gavrielides; Brandon D Gallas; Petra Lenz; Aldo Badano; Stephen M Hewitt
Journal:  Arch Pathol Lab Med       Date:  2011-02       Impact factor: 5.534

5.  Computational Pathology: A Path Ahead.

Authors:  David N Louis; Michael Feldman; Alexis B Carter; Anand S Dighe; John D Pfeifer; Lynn Bry; Jonas S Almeida; Joel Saltz; Jonathan Braun; John E Tomaszewski; John R Gilbertson; John H Sinard; Georg K Gerber; Stephen J Galli; Jeffrey A Golden; Michael J Becich
Journal:  Arch Pathol Lab Med       Date:  2015-06-22       Impact factor: 5.534

6.  Distinguishing age-related from disease-related glomerulosclerosis on kidney biopsy: the Aging Kidney Anatomy study.

Authors:  Walter K Kremers; Aleksandar Denic; John C Lieske; Mariam P Alexander; Vidhu Kaushik; Hisham E Elsherbiny; Harini A Chakkera; Emilio D Poggio; Andrew D Rule
Journal:  Nephrol Dial Transplant       Date:  2015-04-16       Impact factor: 5.992

7.  Assessment of algorithms for mitosis detection in breast cancer histopathology images.

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Journal:  Med Image Anal       Date:  2014-11-29       Impact factor: 8.545

8.  Novel quantitative method to evaluate globotriaosylceramide inclusions in renal peritubular capillaries by virtual microscopy in patients with fabry disease.

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Journal:  Arch Pathol Lab Med       Date:  2012-07       Impact factor: 5.534

9.  The Oxford classification of IgA nephropathy: pathology definitions, correlations, and reproducibility.

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Journal:  Kidney Int       Date:  2009-07-01       Impact factor: 10.612

10.  Intra-observer reproducibility of whole slide imaging for the primary diagnosis of breast needle biopsies.

Authors:  Carolina Reyes; Offiong F Ikpatt; Mehrdad Nadji; Richard J Cote
Journal:  J Pathol Inform       Date:  2014-02-25
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  25 in total

Review 1.  Renal biopsy-driven molecular target identification in glomerular disease.

Authors:  Maja T Lindenmeyer; Matthias Kretzler
Journal:  Pflugers Arch       Date:  2017-06-29       Impact factor: 3.657

2.  Extracellular Matrix in Kidney Fibrosis: More Than Just a Scaffold.

Authors:  Roman David Bülow; Peter Boor
Journal:  J Histochem Cytochem       Date:  2019-05-22       Impact factor: 2.479

3.  Systems Biology and Kidney Disease.

Authors:  Jennifer A Schaub; Habib Hamidi; Lalita Subramanian; Matthias Kretzler
Journal:  Clin J Am Soc Nephrol       Date:  2020-01-28       Impact factor: 8.237

Review 4.  AI applications in renal pathology.

Authors:  Yuankai Huo; Ruining Deng; Quan Liu; Agnes B Fogo; Haichun Yang
Journal:  Kidney Int       Date:  2021-02-10       Impact factor: 10.612

5.  Identification of dicarbonyl and L-xylulose reductase as a therapeutic target in human chronic kidney disease.

Authors:  Paul Perco; Wenjun Ju; Julia Kerschbaum; Johannes Leierer; Rajasree Menon; Catherine Zhu; Matthias Kretzler; Gert Mayer; Michael Rudnicki
Journal:  JCI Insight       Date:  2019-06-20

Review 6.  Digital pathology in nephrology clinical trials, research, and pathology practice.

Authors:  Laura Barisoni; Jeffrey B Hodgin
Journal:  Curr Opin Nephrol Hypertens       Date:  2017-11       Impact factor: 2.894

7.  Reproducibility and Feasibility of Strategies for Morphologic Assessment of Renal Biopsies Using the Nephrotic Syndrome Study Network Digital Pathology Scoring System.

Authors:  Jarcy Zee; Jeffrey B Hodgin; Laura H Mariani; Joseph P Gaut; Matthew B Palmer; Serena M Bagnasco; Avi Z Rosenberg; Stephen M Hewitt; Lawrence B Holzman; Brenda W Gillespie; Laura Barisoni
Journal:  Arch Pathol Lab Med       Date:  2018-02-19       Impact factor: 5.534

8.  Ultrastructural Characterization of Proteinuric Patients Predicts Clinical Outcomes.

Authors:  Virginie Royal; Jarcy Zee; Qian Liu; Carmen Avila-Casado; Abigail R Smith; Gang Liu; Laura H Mariani; Stephen Hewitt; Lawrence B Holzman; Brenda W Gillespie; Jeffrey B Hodgin; Laura Barisoni
Journal:  J Am Soc Nephrol       Date:  2020-02-21       Impact factor: 10.121

9.  Assessment of a computerized quantitative quality control tool for whole slide images of kidney biopsies.

Authors:  Yijiang Chen; Jarcy Zee; Abigail Smith; Catherine Jayapandian; Jeffrey Hodgin; David Howell; Matthew Palmer; David Thomas; Clarissa Cassol; Alton B Farris; Kathryn Perkinson; Anant Madabhushi; Laura Barisoni; Andrew Janowczyk
Journal:  J Pathol       Date:  2021-01-05       Impact factor: 7.996

10.  APOL1 genotype-associated morphologic changes among patients with focal segmental glomerulosclerosis.

Authors:  Jarcy Zee; Michelle T McNulty; Jeffrey B Hodgin; Olga Zhdanova; Sangeeta Hingorani; Jonathan Ashley Jefferson; Keisha L Gibson; Howard Trachtman; Alessia Fornoni; Katherine M Dell; Heather N Reich; Serena Bagnasco; Larry A Greenbaum; Richard A Lafayette; Debbie S Gipson; Elizabeth Brown; Matthias Kretzler; Gerald Appel; Kamalanathan K Sambandam; Katherine R Tuttle; Dhruti Chen; Meredith A Atkinson; Marie C Hogan; Frederick J Kaskel; Kevin E Meyers; John O'Toole; Tarak Srivastava; Christine B Sethna; Michelle A Hladunewich; J J Lin; Cynthia C Nast; Vimal K Derebail; Jiten Patel; Suzanne Vento; Lawrence B Holzman; Ambarish M Athavale; Sharon G Adler; Kevin V Lemley; John C Lieske; Jonathan J Hogan; Crystal A Gadegbeku; Fernando C Fervenza; Chia-Shi Wang; Raed Bou Matar; Pamela Singer; Jeffrey B Kopp; Laura Barisoni; Matthew G Sampson
Journal:  Pediatr Nephrol       Date:  2021-03-01       Impact factor: 3.714

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