Literature DB >> 2858197

Negative co-operativity in glutamate dehydrogenase. Involvement of the 2-position in glutamate in the induction of conformational changes.

E T Bell, C LiMuti, C L Renz, J E Bell.   

Abstract

The 2-position substituent on substrates or substrate analogues for glutamate dehydrogenase is shown to be intimately involved in the induction of conformational changes between subunits in the hexamer by coenzyme. These conformational changes are associated with the negative co-operativity exhibited by this enzyme. 2-Oxoglutarate and L-2-hydroxyglutarate induce indications of co-operativity similar to those induced by the substrate of oxidative deamination, glutamate, in kinetic studies. Glutarate (2-position CH2) does not. A comparison of the effects of L-2-hydroxyglutarate and D-2-hydroxyglutarate or D-glutamate indicates that the 2-position substituent must be in the L-configuration for these conformational changes to be triggered. In addition, glutarate and L-glutamate in ternary enzyme-NAD(P)H-substrate complexes induce very different coenzyme fluorescence properties, showing that glutamate induces a different conformation of the enzyme-coenzyme complex from that induced by glutarate. Although glutamate and glutarate both tighten the binding of reduced coenzyme to the active site, the effect is much greater with glutamate, and the binding is described by two dissociation constants when glutamate is present. The data suggest that the two carboxy groups on the substrate are required to allow synergistic binding of coenzyme and substrate to the active site, but that interactions between the 2-position on the substrate and the enzyme trigger the conformational changes that result in subunit-subunit interactions and in the catalytic co-operativity exhibited by this enzyme.

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Year:  1985        PMID: 2858197      PMCID: PMC1144571          DOI: 10.1042/bj2250209

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  20 in total

1.  Glutamic dehydrogenase. III. The order of substrate addition in the enzymatic reaction.

Authors:  C FRIEDEN
Journal:  J Biol Chem       Date:  1959-11       Impact factor: 5.157

2.  The significance of abrupt transitions in Lineweaver-Burk plots with particular reference to glutamate dehydrogenase. Negative and positive co-operativity in catalytic rate constants.

Authors:  P C Engel; W Ferdinand
Journal:  Biochem J       Date:  1973-01       Impact factor: 3.857

3.  Protection of glutamate dehydrogenase by nicotinamide-adenine dinucleotide against reversible inactivation by pyridoxal 5'-phosphate as a sensitive indicator of conformational change induced by substrates and substrate analogues.

Authors:  S Chen; P C Engel
Journal:  Biochem J       Date:  1974-12       Impact factor: 3.857

4.  Kinetic studies of glutamate dehydrogenase with glutamate and norvaline as substrates. Coenzyme activation and negative homotropic interactions in allosteric enzymes.

Authors:  P C Engel; K Dalziel
Journal:  Biochem J       Date:  1969-12       Impact factor: 3.857

5.  Molecular interactions of competitive inhibitors with bovine liver glutamate dehydrogenase.

Authors:  K S Rogers
Journal:  J Biol Chem       Date:  1971-04-10       Impact factor: 5.157

6.  Active centre equivalent weight of glutamate dehydrogenase from dry weight determinations and spectrophotometric titrations of abortive complexes.

Authors:  R R Egan; K Dalziel
Journal:  Biochim Biophys Acta       Date:  1971-10

7.  A steady-state random-order mechanism for the oxidative deamination of norvaline by glutamate dehydrogenase.

Authors:  C LiMuti; J E Bell
Journal:  Biochem J       Date:  1983-04-01       Impact factor: 3.857

8.  Kinetic mechanism of glutamate dehydrogenase.

Authors:  J E Rife; W W Cleland
Journal:  Biochemistry       Date:  1980-05-27       Impact factor: 3.162

9.  The allosteric mechanism of bovine liver glutamate dehydrogenase. Evidence from circular-dichroism studies for a conformational change in the ternary complex enzyme-(oxidized nicotinamide-adenine dinucleotide)-glutarate.

Authors:  S S Chen; P C Engel
Journal:  Biochem J       Date:  1977-05-01       Impact factor: 3.857

10.  Mechanism of hysteresis in bovine glutamate dehydrogenase: role of subunit interactions.

Authors:  T Smith; J E Bell
Journal:  Biochemistry       Date:  1982-02-16       Impact factor: 3.162

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  7 in total

Review 1.  The structure and allosteric regulation of mammalian glutamate dehydrogenase.

Authors:  Ming Li; Changhong Li; Aron Allen; Charles A Stanley; Thomas J Smith
Journal:  Arch Biochem Biophys       Date:  2011-11-04       Impact factor: 4.013

Review 2.  The structure and allosteric regulation of glutamate dehydrogenase.

Authors:  Ming Li; Changhong Li; Aron Allen; Charles A Stanley; Thomas J Smith
Journal:  Neurochem Int       Date:  2010-11-09       Impact factor: 3.921

3.  Absence of direct coenzyme transfer in an A-B dehydrogenase system.

Authors:  R S Ehrlich
Journal:  Biochem J       Date:  1987-11-15       Impact factor: 3.857

4.  A novel mechanism of V-type zinc inhibition of glutamate dehydrogenase results from disruption of subunit interactions necessary for efficient catalysis.

Authors:  Jaclyn Bailey; Lakeila Powell; Leander Sinanan; Jacob Neal; Ming Li; Thomas Smith; Ellis Bell
Journal:  FEBS J       Date:  2011-08-11       Impact factor: 5.542

5.  Ligand-induced changes in the conformational stability and flexibility of glutamate dehydrogenase and their role in catalysis and regulation.

Authors:  Sarah A Wacker; Michael J Bradley; Jimmy Marion; Ellis Bell
Journal:  Protein Sci       Date:  2010-10       Impact factor: 6.725

6.  Interaction of Zn2+ and Eu3+ with bovine liver glutamate dehydrogenase.

Authors:  E T Bell; A M Stilwell; J E Bell
Journal:  Biochem J       Date:  1987-08-15       Impact factor: 3.857

7.  High throughput screening reveals several new classes of glutamate dehydrogenase inhibitors.

Authors:  Ming Li; Aron Allen; Thomas J Smith
Journal:  Biochemistry       Date:  2007-11-29       Impact factor: 3.162

  7 in total

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