Literature DB >> 28581505

A decade of discovery: CRISPR functions and applications.

Rodolphe Barrangou1, Philippe Horvath2.   

Abstract

This year marks the tenth anniversary of the identification of the biological function of CRISPR-Cas as adaptive immune systems in bacteria. In just a decade, the characterization of CRISPR-Cas systems has established a novel means of adaptive immunity in bacteria and archaea and deepened our understanding of the interplay between prokaryotes and their environment, and CRISPR-based molecular machines have been repurposed to enable a genome editing revolution. Here, we look back on the historical milestones that have paved the way for the discovery of CRISPR and its function, and discuss the related technological applications that have emerged, with a focus on microbiology. Lastly, we provide a perspective on the impacts the field has had on science and beyond.

Mesh:

Year:  2017        PMID: 28581505     DOI: 10.1038/nmicrobiol.2017.92

Source DB:  PubMed          Journal:  Nat Microbiol        ISSN: 2058-5276            Impact factor:   17.745


  148 in total

1.  Identification of genes that are associated with DNA repeats in prokaryotes.

Authors:  Ruud Jansen; Jan D A van Embden; Wim Gaastra; Leo M Schouls
Journal:  Mol Microbiol       Date:  2002-03       Impact factor: 3.501

Review 2.  Bacteriophage resistance mechanisms.

Authors:  Simon J Labrie; Julie E Samson; Sylvain Moineau
Journal:  Nat Rev Microbiol       Date:  2010-03-29       Impact factor: 60.633

Review 3.  CRISPR-Based Technologies and the Future of Food Science.

Authors:  Kurt Selle; Rodolphe Barrangou
Journal:  J Food Sci       Date:  2015-10-07       Impact factor: 3.167

4.  Unraveling the potential of CRISPR-Cas9 for gene therapy.

Authors:  Rodolphe Barrangou; Andrew P May
Journal:  Expert Opin Biol Ther       Date:  2014-12-23       Impact factor: 4.388

5.  Strong bias in the bacterial CRISPR elements that confer immunity to phage.

Authors:  David Paez-Espino; Wesley Morovic; Christine L Sun; Brian C Thomas; Ken-ichi Ueda; Buffy Stahl; Rodolphe Barrangou; Jillian F Banfield
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

6.  A Comprehensive, CRISPR-based Functional Analysis of Essential Genes in Bacteria.

Authors:  Jason M Peters; Alexandre Colavin; Handuo Shi; Tomasz L Czarny; Matthew H Larson; Spencer Wong; John S Hawkins; Candy H S Lu; Byoung-Mo Koo; Elizabeth Marta; Anthony L Shiver; Evan H Whitehead; Jonathan S Weissman; Eric D Brown; Lei S Qi; Kerwyn Casey Huang; Carol A Gross
Journal:  Cell       Date:  2016-05-26       Impact factor: 41.582

7.  Degradation of Phage Transcripts by CRISPR-Associated RNases Enables Type III CRISPR-Cas Immunity.

Authors:  Wenyan Jiang; Poulami Samai; Luciano A Marraffini
Journal:  Cell       Date:  2016-02-04       Impact factor: 41.582

8.  Diversity and evolution of class 2 CRISPR-Cas systems.

Authors:  Sergey Shmakov; Aaron Smargon; David Scott; David Cox; Neena Pyzocha; Winston Yan; Omar O Abudayyeh; Jonathan S Gootenberg; Kira S Makarova; Yuri I Wolf; Konstantin Severinov; Feng Zhang; Eugene V Koonin
Journal:  Nat Rev Microbiol       Date:  2017-01-23       Impact factor: 60.633

9.  Phage response to CRISPR-encoded resistance in Streptococcus thermophilus.

Authors:  Hélène Deveau; Rodolphe Barrangou; Josiane E Garneau; Jessica Labonté; Christophe Fremaux; Patrick Boyaval; Dennis A Romero; Philippe Horvath; Sylvain Moineau
Journal:  J Bacteriol       Date:  2007-12-07       Impact factor: 3.490

10.  Exploiting CRISPR-Cas nucleases to produce sequence-specific antimicrobials.

Authors:  David Bikard; Chad W Euler; Wenyan Jiang; Philip M Nussenzweig; Gregory W Goldberg; Xavier Duportet; Vincent A Fischetti; Luciano A Marraffini
Journal:  Nat Biotechnol       Date:  2014-10-05       Impact factor: 54.908

View more
  84 in total

1.  RNA-guided DNA insertion with CRISPR-associated transposases.

Authors:  Jonathan Strecker; Alim Ladha; Zachary Gardner; Jonathan L Schmid-Burgk; Kira S Makarova; Eugene V Koonin; Feng Zhang
Journal:  Science       Date:  2019-06-06       Impact factor: 47.728

2.  Hijack of CRISPR defences by selfish genes holds clinical promise.

Authors:  Fyodor D Urnov
Journal:  Nature       Date:  2019-07       Impact factor: 49.962

3.  Profile of Rodolphe Barrangou.

Authors:  Tinsley H Davis
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-29       Impact factor: 11.205

4.  Different genetic and morphological outcomes for phages targeted by single or multiple CRISPR-Cas spacers.

Authors:  B N J Watson; R A Easingwood; B Tong; M Wolf; G P C Salmond; R H J Staals; M Bostina; P C Fineran
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2019-05-13       Impact factor: 6.237

Review 5.  Approach for in vivo delivery of CRISPR/Cas system: a recent update and future prospect.

Authors:  Yu-Fan Chuang; Andrew J Phipps; Fan-Li Lin; Valerie Hecht; Alex W Hewitt; Peng-Yuan Wang; Guei-Sheung Liu
Journal:  Cell Mol Life Sci       Date:  2021-01-03       Impact factor: 9.261

6.  CRISPR Arrays Away from cas Genes.

Authors:  Sergey A Shmakov; Irina Utkina; Yuri I Wolf; Kira S Makarova; Konstantin V Severinov; Eugene V Koonin
Journal:  CRISPR J       Date:  2020-12

7.  Systematic prediction of genes functionally linked to CRISPR-Cas systems by gene neighborhood analysis.

Authors:  Sergey A Shmakov; Kira S Makarova; Yuri I Wolf; Konstantin V Severinov; Eugene V Koonin
Journal:  Proc Natl Acad Sci U S A       Date:  2018-05-21       Impact factor: 11.205

8.  CRISPR still needs microbiologists.

Authors: 
Journal:  Nat Microbiol       Date:  2018-06       Impact factor: 17.745

9.  Evolutionary and functional classification of the CARF domain superfamily, key sensors in prokaryotic antivirus defense.

Authors:  Kira S Makarova; Albertas Timinskas; Yuri I Wolf; Ayal B Gussow; Virginijus Siksnys; Česlovas Venclovas; Eugene V Koonin
Journal:  Nucleic Acids Res       Date:  2020-09-18       Impact factor: 16.971

10.  CRISPR Technology for Breast Cancer: Diagnostics, Modeling, and Therapy.

Authors:  Rachel L Mintz; Madeleine A Gao; Kahmun Lo; Yeh-Hsing Lao; Mingqiang Li; Kam W Leong
Journal:  Adv Biosyst       Date:  2018-08-17
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.