Literature DB >> 28577509

Nuclear bodies: news insights into structure and function.

David Staněk1, Archa H Fox2.   

Abstract

The cell nucleus contains a number of different dynamic bodies that are variously composed of proteins and generally, but not always, specific RNA molecules. Recent studies have revealed new understanding about nuclear body formation and function in different aspects of nuclear metabolism. Here, we focus on findings describing the role of nuclear bodies in the biogenesis of specific ribonucleoprotein complexes, processing of key mRNAs, and subnuclear sequestration of protein factors. We highlight how nuclear bodies are involved in stress responses, innate immunity and tumorigenesis. We further review organization of nuclear bodies and principles that govern their assembly, highlighting the pivotal role of scaffolding noncoding RNAs, and liquid-liquid phase separation, which are transforming our picture of nuclear body formation.
Copyright © 2017 Elsevier Ltd. All rights reserved.

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Year:  2017        PMID: 28577509     DOI: 10.1016/j.ceb.2017.05.001

Source DB:  PubMed          Journal:  Curr Opin Cell Biol        ISSN: 0955-0674            Impact factor:   8.382


  34 in total

1.  An SMU Splicing Factor Complex Within Nuclear Speckles Contributes to Magnesium Homeostasis in Arabidopsis.

Authors:  Zhihang Feng; Hiroshi Nagao; Baohai Li; Naoyuki Sotta; Yusuke Shikanai; Katsushi Yamaguchi; Shuji Shigenobu; Takehiro Kamiya; Toru Fujiwara
Journal:  Plant Physiol       Date:  2020-06-29       Impact factor: 8.340

Review 2.  Molecular simulations of cellular processes.

Authors:  Fabio Trovato; Giordano Fumagalli
Journal:  Biophys Rev       Date:  2017-11-28

3.  A Short Tandem Repeat-Enriched RNA Assembles a Nuclear Compartment to Control Alternative Splicing and Promote Cell Survival.

Authors:  Karen Yap; Svetlana Mukhina; Gen Zhang; Jason S C Tan; Hong Sheng Ong; Eugene V Makeyev
Journal:  Mol Cell       Date:  2018-10-11       Impact factor: 17.970

Review 4.  Recent advances in the spatial organization of the mammalian genome.

Authors:  Yatendra Kumar; Dipta Sengupta; Wendya Bickmore
Journal:  J Biosci       Date:  2020       Impact factor: 1.826

Review 5.  Engineering 3D genome organization.

Authors:  Haifeng Wang; Mengting Han; Lei S Qi
Journal:  Nat Rev Genet       Date:  2021-02-08       Impact factor: 53.242

6.  De novo TRIM8 variants impair its protein localization to nuclear bodies and cause developmental delay, epilepsy, and focal segmental glomerulosclerosis.

Authors:  Patricia L Weng; Amar J Majmundar; Kamal Khan; Tze Y Lim; Shirlee Shril; Gina Jin; John Musgrove; Minxian Wang; Dina F Ahram; Vimla S Aggarwal; Louise E Bier; Erin L Heinzen; Ana C Onuchic-Whitford; Nina Mann; Florian Buerger; Ronen Schneider; Konstantin Deutsch; Thomas M Kitzler; Verena Klämbt; Amy Kolb; Youying Mao; Christelle Moufawad El Achkar; Adele Mitrotti; Jeremiah Martino; Bodo B Beck; Janine Altmüller; Marcus R Benz; Shoji Yano; Mohamad A Mikati; Talha Gunduz; Heidi Cope; Vandana Shashi; Howard Trachtman; Monica Bodria; Gianluca Caridi; Isabella Pisani; Enrico Fiaccadori; Asmaa S AbuMaziad; Julian A Martinez-Agosto; Ora Yadin; Jonathan Zuckerman; Arang Kim; Ulrike John-Kroegel; Amanda V Tyndall; Jillian S Parboosingh; A Micheil Innes; Agnieszka Bierzynska; Ania B Koziell; Mordi Muorah; Moin A Saleem; Julia Hoefele; Korbinian M Riedhammer; Ali G Gharavi; Vaidehi Jobanputra; Emma Pierce-Hoffman; Eleanor G Seaby; Anne O'Donnell-Luria; Heidi L Rehm; Shrikant Mane; Vivette D D'Agati; Martin R Pollak; Gian Marco Ghiggeri; Richard P Lifton; David B Goldstein; Erica E Davis; Friedhelm Hildebrandt; Simone Sanna-Cherchi
Journal:  Am J Hum Genet       Date:  2021-01-27       Impact factor: 11.025

Review 7.  The Self-Organizing Genome: Principles of Genome Architecture and Function.

Authors:  Tom Misteli
Journal:  Cell       Date:  2020-09-24       Impact factor: 41.582

Review 8.  Cellular functions of long noncoding RNAs.

Authors:  Run-Wen Yao; Yang Wang; Ling-Ling Chen
Journal:  Nat Cell Biol       Date:  2019-05-02       Impact factor: 28.824

9.  An optimized fixation method containing glyoxal and paraformaldehyde for imaging nuclear bodies.

Authors:  Run-Wen Yao; Peng-Fei Luan; Ling-Ling Chen
Journal:  RNA       Date:  2021-04-12       Impact factor: 5.636

Review 10.  Multi-phaseted problems of TDP-43 in selective neuronal vulnerability in ALS.

Authors:  Kazuhide Asakawa; Hiroshi Handa; Koichi Kawakami
Journal:  Cell Mol Life Sci       Date:  2021-03-11       Impact factor: 9.261

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