Literature DB >> 28573472

New nucleic acid testing devices to diagnose infectious diseases in resource-limited settings.

P Maffert1,2, S Reverchon2, W Nasser2, C Rozand1, H Abaibou3.   

Abstract

Point-of-care diagnosis based on nucleic acid testing aims to incorporate all the analytical steps, from sample preparation to nucleic acid amplification and detection, in a single device. This device needs to provide a low-cost, robust, sensitive, specific, and easily readable analysis. Microfluidics has great potential for handling small volumes of fluids on a single platform. Microfluidic technology has recently been applied to paper, which is already used in low-cost lateral flow tests. Nucleic acid extraction from a biological specimen usually requires cell filtration and lysis on specific membranes, while affinity matrices, such as chitosan or polydiacetylene, are well suited to concentrating nucleic acids for subsequent amplification. Access to electricity is often difficult in resource-limited areas, so the amplification step needs to be equipment-free. Consequently, the reaction has to be isothermal to alleviate the need for a thermocycler. LAMP, NASBA, HDA, and RPA are examples of the technologies available. Nucleic acid detection techniques are currently based on fluorescence, colorimetry, or chemiluminescence. For point-of-care diagnostics, the results should be readable with the naked eye. Nowadays, interpretation and communication of results to health professionals could rely on a smartphone, used as a telemedicine device. The major challenge of creating an "all-in-one" diagnostic test involves the design of an optimal solution and a sequence for each analytical step, as well as combining the execution of all these steps on a single device. This review provides an overview of available materials and technologies which seem to be adapted to point-of-care nucleic acid-based diagnosis, in low-resource areas.

Entities:  

Mesh:

Year:  2017        PMID: 28573472     DOI: 10.1007/s10096-017-3013-9

Source DB:  PubMed          Journal:  Eur J Clin Microbiol Infect Dis        ISSN: 0934-9723            Impact factor:   3.267


  67 in total

1.  Loop-mediated isothermal amplification of DNA.

Authors:  T Notomi; H Okayama; H Masubuchi; T Yonekawa; K Watanabe; N Amino; T Hase
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

2.  Understanding wax printing: a simple micropatterning process for paper-based microfluidics.

Authors:  Emanuel Carrilho; Andres W Martinez; George M Whitesides
Journal:  Anal Chem       Date:  2009-08-15       Impact factor: 6.986

Review 3.  New tools and new biology: recent miniaturized systems for molecular and cellular biology.

Authors:  Morgan Hamon; Jong Wook Hong
Journal:  Mol Cells       Date:  2013-12-02       Impact factor: 5.034

Review 4.  Paper-based sample-to-answer molecular diagnostic platform for point-of-care diagnostics.

Authors:  Jane Ru Choi; Ruihua Tang; ShuQi Wang; Wan Abu Bakar Wan Abas; Belinda Pingguan-Murphy; Feng Xu
Journal:  Biosens Bioelectron       Date:  2015-07-02       Impact factor: 10.618

5.  Chemiluminescence-imaging detection of DNA on a solid-phase membrane by using a peroxidase-labeled macromolecular probe.

Authors:  Md Golam Azam; Mutsumi Yamasuji; Tomasz Krawczyk; Takayuki Shibata; Tsutomu Kabashima; Masaaki Kai
Journal:  Talanta       Date:  2015-03-10       Impact factor: 6.057

6.  Rapid and alternative fabrication method for microfluidic paper based analytical devices.

Authors:  Soheil Malekghasemi; Enver Kahveci; Memed Duman
Journal:  Talanta       Date:  2016-06-22       Impact factor: 6.057

7.  Loop-mediated isothermal amplification (LAMP) of gene sequences and simple visual detection of products.

Authors:  Norihiro Tomita; Yasuyoshi Mori; Hidetoshi Kanda; Tsugunori Notomi
Journal:  Nat Protoc       Date:  2008       Impact factor: 13.491

8.  Helicase-dependent isothermal DNA amplification.

Authors:  Myriam Vincent; Yan Xu; Huimin Kong
Journal:  EMBO Rep       Date:  2004-07-09       Impact factor: 8.807

Review 9.  Assembly and dynamics of the bacteriophage T4 homologous recombination machinery.

Authors:  Jie Liu; Scott W Morrical
Journal:  Virol J       Date:  2010-12-03       Impact factor: 4.099

Review 10.  Nucleic acid amplification: Alternative methods of polymerase chain reaction.

Authors:  Md Fakruddin; Khanjada Shahnewaj Bin Mannan; Abhijit Chowdhury; Reaz Mohammad Mazumdar; Md Nur Hossain; Sumaiya Islam; Md Alimuddin Chowdhury
Journal:  J Pharm Bioallied Sci       Date:  2013-10
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  20 in total

1.  Reverse Transcription Recombinase Polymerase Amplification Assays for Rapid Detection of Tick-Borne Encephalitis Virus Infection.

Authors:  Jia Jia; Yuchang Li; Xiaoyan Wu; Sen Zhang; Yi Hu; Jing Li; Tao Jiang; Xiaoping Kang
Journal:  Virol Sin       Date:  2019-04-02       Impact factor: 4.327

2.  A strip of lateral flow gene assay using gold nanoparticles for point-of-care diagnosis of African swine fever virus in limited environment.

Authors:  Zhiying Wang; Wenjie Yu; Ruibin Xie; Shuming Yang; Ailiang Chen
Journal:  Anal Bioanal Chem       Date:  2021-05-21       Impact factor: 4.142

Review 3.  Point of care testing for infectious diseases.

Authors:  Hui Chen; Kengku Liu; Zhao Li; Ping Wang
Journal:  Clin Chim Acta       Date:  2019-03-08       Impact factor: 3.786

Review 4.  The Current and Future Use of Telemedicine in Infectious Diseases Practice.

Authors:  Caitlin E Coombes; Megan E Gregory
Journal:  Curr Infect Dis Rep       Date:  2019-10-19       Impact factor: 3.725

Review 5.  Point-of-care diagnostics for infectious diseases: From methods to devices.

Authors:  Chao Wang; Mei Liu; Zhifei Wang; Song Li; Yan Deng; Nongyue He
Journal:  Nano Today       Date:  2021-02-06       Impact factor: 20.722

Review 6.  Recent innovations in cost-effective polymer and paper hybrid microfluidic devices.

Authors:  Wan Zhou; Maowei Dou; Sanjay S Timilsina; Feng Xu; XiuJun Li
Journal:  Lab Chip       Date:  2021-07-13       Impact factor: 7.517

Review 7.  Bridging the gap between development of point-of-care nucleic acid testing and patient care for sexually transmitted infections.

Authors:  Kuangwen Hsieh; Johan H Melendez; Charlotte A Gaydos; Tza-Huei Wang
Journal:  Lab Chip       Date:  2022-02-01       Impact factor: 7.517

8.  Detection of Zika virus using reverse-transcription LAMP coupled with reverse dot blot analysis in saliva.

Authors:  Maite Sabalza; Rubina Yasmin; Cheryl A Barber; Talita Castro; Daniel Malamud; Beum Jun Kim; Hui Zhu; Richard A Montagna; William R Abrams
Journal:  PLoS One       Date:  2018-02-05       Impact factor: 3.240

9.  Development and evaluation of rapid novel isothermal amplification assays for important veterinary pathogens: Chlamydia psittaci and Chlamydia pecorum.

Authors:  Martina Jelocnik; Md Mominul Islam; Danielle Madden; Cheryl Jenkins; James Branley; Scott Carver; Adam Polkinghorne
Journal:  PeerJ       Date:  2017-09-08       Impact factor: 2.984

10.  Development of a Portable SPR Sensor for Nucleic Acid Detection.

Authors:  Yafeng Huang; Lulu Zhang; Hao Zhang; Yichen Li; Luyao Liu; Yuanyuan Chen; Xianbo Qiu; Duli Yu
Journal:  Micromachines (Basel)       Date:  2020-05-21       Impact factor: 2.891

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