Literature DB >> 28559335

Spontaneous formation of aligned DNA nanowires by capillarity-induced skin folding.

So Nagashima1, Hyun Dong Ha1, Do Hyun Kim1, Andrej Košmrlj2, Howard A Stone3, Myoung-Woon Moon4.   

Abstract

Although DNA nanowires have proven useful as a template for fabricating functional nanomaterials and a platform for genetic analysis, their widespread use is still hindered because of limited control over the size, geometry, and alignment of the nanowires. Here, we document the capillarity-induced folding of an initially wrinkled surface and present an approach to the spontaneous formation of aligned DNA nanowires using a template whose surface morphology dynamically changes in response to liquid. In particular, we exploit the familiar wrinkling phenomenon that results from compression of a thin skin on a soft substrate. Once a droplet of liquid solution containing DNA molecules is placed on the wrinkled surface, the liquid from the droplet enters certain wrinkled channels. The capillary forces deform wrinkles containing liquid into sharp folds, whereas the neighboring empty wrinkles are stretched out. In this way, we obtain a periodic array of folded channels that contain liquid solution with DNA molecules. Such an approach serves as a template for the fabrication of arrays of straight or wrinkled DNA nanowires, where their characteristic scales are robustly tunable with the physical properties of liquid and the mechanical and geometrical properties of the elastic system.

Keywords:  DNA nanowires; capillary forces; folding; instability; wrinkling

Year:  2017        PMID: 28559335      PMCID: PMC5474812          DOI: 10.1073/pnas.1700003114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  18 in total

1.  Dynamic molecular combing: stretching the whole human genome for high-resolution studies.

Authors:  X Michalet; R Ekong; F Fougerousse; S Rousseaux; C Schurra; N Hornigold; M van Slegtenhorst; J Wolfe; S Povey; J S Beckmann; A Bensimon
Journal:  Science       Date:  1997-09-05       Impact factor: 47.728

2.  Solvent compatibility of poly(dimethylsiloxane)-based microfluidic devices.

Authors:  Jessamine Ng Lee; Cheolmin Park; George M Whitesides
Journal:  Anal Chem       Date:  2003-12-01       Impact factor: 6.986

3.  Geometry and physics of wrinkling.

Authors:  E Cerda; L Mahadevan
Journal:  Phys Rev Lett       Date:  2003-02-19       Impact factor: 9.161

4.  Virus-based toolkit for the directed synthesis of magnetic and semiconducting nanowires.

Authors:  Chuanbin Mao; Daniel J Solis; Brian D Reiss; Stephen T Kottmann; Rozamond Y Sweeney; Andrew Hayhurst; George Georgiou; Brent Iverson; Angela M Belcher
Journal:  Science       Date:  2004-01-09       Impact factor: 47.728

5.  Mechanics of invagination and folding: Hybridized instabilities when one soft tissue grows on another.

Authors:  Tuomas Tallinen; John S Biggins
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2015-08-28

6.  Generating highly ordered DNA nanostrand arrays.

Authors:  Jingjiao Guan; L James Lee
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-13       Impact factor: 11.205

7.  Flow-enabled self-assembly of large-scale aligned nanowires.

Authors:  Bo Li; Chuchu Zhang; Beibei Jiang; Wei Han; Zhiqun Lin
Journal:  Angew Chem Int Ed Engl       Date:  2015-02-16       Impact factor: 15.336

8.  Macroscopic highly aligned DNA nanowires created by controlled evaporative self-assembly.

Authors:  Bo Li; Wei Han; Myunghwan Byun; Lei Zhu; Qingze Zou; Zhiqun Lin
Journal:  ACS Nano       Date:  2013-04-10       Impact factor: 15.881

9.  Tunable open-channel microfluidics on soft poly(dimethylsiloxane) (PDMS) substrates with sinusoidal grooves.

Authors:  Krishnacharya Khare; Junhao Zhou; Shu Yang
Journal:  Langmuir       Date:  2009-11-03       Impact factor: 3.882

10.  Combing of genomic DNA from droplets containing picograms of material.

Authors:  Jochem Deen; Wouter Sempels; Raf De Dier; Jan Vermant; Peter Dedecker; Johan Hofkens; Robert K Neely
Journal:  ACS Nano       Date:  2015-01-08       Impact factor: 15.881

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  1 in total

1.  Active elastocapillarity in soft solids with negative surface tension.

Authors:  Jack Binysh; Thomas R Wilks; Anton Souslov
Journal:  Sci Adv       Date:  2022-03-11       Impact factor: 14.136

  1 in total

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