| Literature DB >> 28548387 |
Abstract
Renal function plays a central role in cardiovascular, kidney, and multiple other diseases, and many existing and novel therapies act through renal mechanisms. Even with decades of accumulated knowledge of renal physiology, pathophysiology, and pharmacology, the dynamics of renal function remain difficult to understand and predict, often resulting in unexpected or counterintuitive therapy responses. Quantitative systems pharmacology modeling of renal function integrates this accumulated knowledge into a quantitative framework, allowing evaluation of competing hypotheses, identification of knowledge gaps, and generation of new experimentally testable hypotheses. Here we present a model of renal physiology and control mechanisms involved in maintaining sodium and water homeostasis. This model represents the core renal physiological processes involved in many research questions in drug development. The model runs in R and the code is made available. In a companion article, we present a case study using the model to explore mechanisms and pharmacology of salt-sensitive hypertension.Entities:
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Year: 2017 PMID: 28548387 PMCID: PMC5488122 DOI: 10.1002/psp4.12178
Source DB: PubMed Journal: CPT Pharmacometrics Syst Pharmacol ISSN: 2163-8306
Figure 1Schematic representation of the model. Top left: The renal vasculature is modeled by a single preafferent resistance vessel flowing into N parallel nephrons. Bottom left: Sodium and water filtration through the glomerulus is modeled according to Starling's law. Sodium and water are reabsorbed at different fractional rates in the PT, LoH, DCT, and CNT/CD, and sodium and water excretion rates are determined from unabsorbed sodium and water. Top right: Sodium and water excretion feed into the cardiovascular portion of the model, where the balance between excretion and intake determines extracellular fluid volume, plasma sodium concentration, and ultimately cardiac output and MAP. Na concentration and MAP feed back into the renal model (left), closing the loop. Bottom right: Regulatory feedback mechanisms include the RAAS, TGF, myogenic autoregulation, RIHP regulation of tubular Na+ reabsorption, vasopressin regulation of tubular water reabsorption, and local blood flow autoregulation. Variables that provide functional links between the model components are shown in red. Variables that are sensed and drive feedback mechanisms are shown in green.
Parameters with values that are known from human physiology
| Parameter | Definition | Normal range | Value | Units |
|---|---|---|---|---|
| CNa,0 | Target sodium concentration | 135‐145 | 140 | mEq/L |
| CO0 | Cardiac output setpoint | 4‐8 | 5 | L/min |
| Cprot | Plasma protein concentration | 6‐8 | 7 | g/dl |
| cvenous | Venous compliance | 100‐150 | 135 | mmHg/L |
| daff,0 | Baseline afferent diameter | 1.2‐1.8 | 1.5 | μm |
| deff,0 | Baseline efferent diameter | 0.9‐1.2 | 1.1 | μm |
| Dc, cd | Effective CNT/CD diameter | 15‐20 | 17 | μm |
| Dc_dt | DCT tubule diameter | 15‐20 | 17 | μm |
| Dc_loh | LoH diameter | 15‐20 | 17 | μm |
| Dc_pt | PT diameter | 20‐35 | 27 | μm |
| Fwater‐in | Water intake rate | 1‐3 | 2 | L/day |
| Kf | Glomerular ultrafiltration coefficient | 3‐5 | 3.9 | nl/min‐mmHg |
| Lcd | Length of the CNT/CD | 8‐15 | 10 | mm |
| Ldt | Distal tubule length | 4‐6 | 5 | mm |
| Lloh_asc | Ascending LoH length | 8‐15 | 10 | mm |
| Lloh_des | Descending LoH length | 8‐15 | 10 | mm |
| Lpt | PT length | 10‐20 | 14 | mm |
| MAP0 | Mean arterial pressure setpoint | 80‐95 | 85 | mmHg |
| Nnephrons | Number of nephrons | ∼2e6 | 2.00E+06 | |
| Pc_asc_loh | Ascending LoH control pressure | 6‐8 | 7 | mmHg |
| Pc_cd | CNT/CD control pressure | 4‐6 | 5 | mmHg |
| Pc_des_loh | Descending LoH control pressure | 7‐10 | 8 | mmHg |
| Pc_dt | DCT control pressure | 5‐7 | 6 | mmHg |
| Pc_pt | PT control pressure | 15‐22 | 19.4 | mmHg |
| Pvenous | Venous pressure | 3‐8 | 4 | mmHg |
| RBF0 | Nominal renal blood flow | 800‐1,200 | 1,000 | ml/min |
| Rpreaff,0 | Baseline preafferent resistance | 10‐20 | 14 | mmHg‐min/L |
| Rvr | Resistance to venous return | 1‐2 | 1.3 | mmHg/min/L |
| β | Tubular compliance | 0.2‐0.4 | 0.2 | |
| µblood | Blood viscosity | 5.00E‐07 | 5.00E‐07 | mmHg‐min |
| ηdt | Nominal DCT fractional sodium reabsorption rate | 0.4‐0.6 | 0.5 | |
| ηloh | Nominal LoH fractional sodium reabsorption rate | 0.5‐0.9 | 0.88 | |
| ηpt | Nominal PT fractional sodium reabsorption rate | 0.5‐0.9 | 0.7 | |
| ΦNa,in | Sodium intake rate | 50‐200 | 100 | mmol/day |
Parameters defining the RAAS pathway17
| Parameter | Definition | Value | Units |
|---|---|---|---|
| Aaldo‐renin | Strength of aldosterone negative feedback on renin secretion | −0.1 | |
| AAT1‐renin | Strength of AT1‐bound AngII negative feedback on renin secretion | −1.2 | |
| Amd‐ren | Strength of effect of MD sodium flow on renin secretion | 1.25 | |
| ACE | ACE rate of conversion of AngI to AngII | 48.9 | hr−1 |
| Aldo0 | Baseline aldosterone concentration | 85 | mg/dl |
| AT1‐bound_AngII0 | Baseline AT1‐bound AngII | 16.6 | fmol/ml |
| CAT1 | AT1 receptor binding rate | 12.1 | hr−1 |
| CAT2 | AT2 receptor binding rate | 4 | hr−1 |
| Chymase | Chymase rate of conversion of AngI to AngII | 1.25 | hr−1 |
| Kd,AngI | AngI degradation rate | 83.2 | hr−1 |
| Kd,AngII | AngII degradation rate | 63 | hr−1 |
| Kd,AT1 | AT1‐bound AngII degradation rate | 3.47 | hr−1 |
| Kd,renin | Renin degradation rate | 4 | pg/ml/min |
| SECrenin,0 | Baseline renin secretion rate | 63 | pg/ml/min |
| PRC(0) | Baseline plasma renin concentration | 62.9 | pg/ml |
Fitting parameters
| Parameter | Definition | Value |
|---|---|---|
| GCO‐tpr | Cardiac output autoregulation gain | 2 |
| GNa‐vasopressin | Vasopressin controller gain | 1 |
| Ki_vp | Integral gain for vasopressin controller | 0.1 |
| Ki‐tpr | Integral gain for systemic vascular resistance controller | 100 |
| mAT1 | Slope of AT1‐bound AngII physiological effects | 7 |
| maldo | Slope of aldosterone physiological effects | 0.5 |
| mautoreg | Preafferent myogenic autoregulation signal slope | 2 |
| mTGF | TGF effect slope | 0.5 |
| QNa | Rate constant – sodium transfer between blood and ECF | 1 |
| Qwater | Vasopressin controller gain | 1 |
| Saldo,CD | Max effect on CD reabsorption as aldosterone goes to infinity | 0.3 |
| Saldo,DCT | Max effect on DCT reabsorption as aldosterone goes to infinity | 0.1 |
| SAT1,aff | Max effect on preafferent resistance as AT1‐bound AngII goes to infinity | 0.5 |
| SAT1,aldo | Max effect on aldosterone as AT1‐bound AngII goes to infinity | 0.05 |
| SAT1,eff | Max effect on efferent resistance as AT1‐bound AngII goes to infinity | 0.3 |
| SAT1,preaff | Max effect on afferent resistance as AT1‐bound AngII goes to infinity | 0.5 |
| SAT1,PT | Max effect on PT sodium reabsorption as AT1‐bound AngII goes to infinity | 0.1 |
| SAT1,sys | Max effect on systemic resistance as AT1‐bound AngII goes to infinity | 0.02 |
| Sautoreg | Max myogenic autoregulatory effect on preafferent resistance | 0.5 |
| STGF | TGF maximal response as | 0.6 |
| SP‐N,LoH | Max effect on LoH sodium reabsorption as RIHP goes to infinity | 3 |
| SP‐N,CD | Max effect on CNT/CD sodium reabsorption as RIHP goes to infinity | 3 |
| SP‐N,DCT | Max effect on DCT sodium reabsorption as RIHP goes to infinity | 3 |
| SP‐N,PT | Max effect on PT sodium reabsorption as RIHP goes to infinity | 3 |
Comparison of simulated steady‐state output variables with known ranges for human physiology
| Variable | Normal range | Value | Units |
|---|---|---|---|
| SVR | 0‐20 | 16.8 | mmHg‐L/min |
| CO | 4‐8 | 5 | L/min |
| MAP | 80‐95 | 84 | mmHg |
| RVR | 65‐120 | 80.8 | mmHg‐L/min |
| RBF | 800‐1200 | 999 | ml/min |
| RPF | 450‐750 | 594 | ml/min |
| Glomerular Pressure | 55‐62 | 60 | mmHg |
| FPR | 50‐78 | 69.8 | % |
| FDR | 95‐99 | 98.2 | % |
| FENa | 0.5‐2 | 0.5 | % |
| Filtration Fraction | 15‐20 | 16.9 | % |
| GFR | 90‐120 | 100 | ml/min |
| SNGFR | 45‐60 | 50 | nl/min |
| Bowman Pressure | 15‐22 | 19.6 | mmHg |
| Na concentration | 135‐150 | 140 | mEq/L |
| MD sodium concentration | 40‐80 | 61 | mEq/L |
| 24 hr urine volume | 2.1 | L/day | |
| 24 hr Na excretion | 100 | mEq/day | |
| Aldosterone | 40‐150 | 86.4 | pg/ml |
| PRA | 0.2‐3.3 | 1.02 | ng/ml/hr |
| PRC | 3‐50 | 16.8 | pg/ml |
| blood volume | 3.5‐7 | 4.95 | L |
| extracellular fluid volume | 13‐18 | 15 | L |
Figure 2Impact of choice of controller gains for proportional‐integral feedback controllers on the response of cardiac output (a) and Na concentration (b) to a perturbation (step increase in Na intake). Gains were chosen so that these variables quickly returned to steady state without oscillations (yellow lines).