Literature DB >> 28548387

A quantitative systems physiology model of renal function and blood pressure regulation: Model description.

K M Hallow1, Y Gebremichael1.   

Abstract

Renal function plays a central role in cardiovascular, kidney, and multiple other diseases, and many existing and novel therapies act through renal mechanisms. Even with decades of accumulated knowledge of renal physiology, pathophysiology, and pharmacology, the dynamics of renal function remain difficult to understand and predict, often resulting in unexpected or counterintuitive therapy responses. Quantitative systems pharmacology modeling of renal function integrates this accumulated knowledge into a quantitative framework, allowing evaluation of competing hypotheses, identification of knowledge gaps, and generation of new experimentally testable hypotheses. Here we present a model of renal physiology and control mechanisms involved in maintaining sodium and water homeostasis. This model represents the core renal physiological processes involved in many research questions in drug development. The model runs in R and the code is made available. In a companion article, we present a case study using the model to explore mechanisms and pharmacology of salt-sensitive hypertension.
© 2017 The Authors CPT: Pharmacometrics & Systems Pharmacology published by Wiley Periodicals, Inc. on behalf of American Society for Clinical Pharmacology and Therapeutics.

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Year:  2017        PMID: 28548387      PMCID: PMC5488122          DOI: 10.1002/psp4.12178

Source DB:  PubMed          Journal:  CPT Pharmacometrics Syst Pharmacol        ISSN: 2163-8306


WHAT IS THE CURRENT KNOWLEDGE ON THE TOPIC? ☑ The kidney plays a central role in many diseases and therapies, but the complexity of renal function makes understanding and predicting therapy effects challenging. WHAT QUESTION DID THIS STUDY ADDRESS? ☑ We present a model of renal physiology that facilitates dynamic simulation of renal and systemic hemodynamics. The model runs in R and the code is made available. WHAT THIS STUDY ADDS TO OUR KNOWLEDGE ☑ The model presented here incorporates key processes and feedback mechanisms important for many research questions in renal drug development, and thus provides a core model that can serve as the starting point for a wide range of modeling endeavors. HOW MIGHT THIS CHANGE DRUG DISCOVERY, DEVELOPMENT, AND/OR THERAPEUTICS? ☑ This model provides a platform that may facilitate evaluating the renal response to potential targets in development, identifying patient subgroups most likely to benefit from a treatment (or subgroups who may be harmed), simulating and interpreting of counterintuitive biomarker data related to renal function and/or renal toxicity, and relating preclinical and short‐term clinical biomarkers to long‐term responses and outcomes. Renal function is central to many diseases, including hypertension, chronic kidney disease, and heart failure. Most drugs that effectively treat these diseases act through renal mechanisms. A large body of knowledge and data about renal physiology, pathophysiology, and pharmacology has been generated over decades from studies in humans and animals, in health and disease, over timescales from minutes to decades, using a variety of interventions, measuring a variety of biomarkers. But even with all of this information, understanding and predicting renal function and the renal response to therapy remains challenging. The multiple feedback systems involved over different timescales and interaction with the larger cardiovascular system can produce counterintuitive behavior and make it difficult to integrate all these pieces of data into a full picture of renal function. Mathematical modeling provides a means for integrating accumulated knowledge and data into a consistent quantitative framework, allowing evaluation of competing hypotheses, identification of knowledge gaps, and generation of new hypotheses. Such models have many applications in drug development: quantitative evaluation of the renal response to potential targets in development, identifying patient subgroups most likely to benefit (or suffer) from treatment, interpreting counterintuitive biomarker data, and relating preclinical and short‐term renal biomarkers to long‐term responses and outcomes. Regardless of the application, many of the core renal physiological processes involved are the same. Thus, a core model of renal function may be applied in a wide range of modeling endeavors, while also serving as a data integration tool that can be improved over time as it is tested, refined, and informed with additional data. This process could extend across research groups in both industry and academia, and both preclinical and clinical applications. However, this requires the establishment of a core model to serve as a starting point. The field of renal mathematical modeling is not new—it was initiated in the 1970s by Arthur Guyton and Thomas Coleman, who developed an elegant model to demonstrate the pressure‐natriuresis phenomenon.1, 2, 3 Since then, additional models have been developed and extended that have contributed to a deeper understanding of renal function.4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15 Each has distinct advantages, but their utilization in drug development has been limited. Some describe nephron function in exquisite detail, but cannot dynamically link renal function with systemic sodium (Na) and volume control, thus limiting the ability to link changes in renal function with clinical measures like blood pressure. Others rely on phenomenological relationships, limiting the ability to evaluate the impact of specific mechanistic changes. Others have not been fully described publicly, making it difficult for others to evaluate and utilize them. Here we present a model of renal physiology and systemic volume regulation that draws from previous models,1, 5, 11, 16, 17, 18 and which we hope will be useful in establishing a collaborative integrated model of renal function. The model facilitates dynamic simulation of systemic and renal hemodynamics through a mechanistic representation of renal filtration, reabsorption, and systemic Na and water balance. The model code is made publicly available. In a companion article, we present a case study using the model to explore mechanisms of salt‐sensitive hypertension and differential responses to antihypertensive treatment in salt‐sensitive and salt‐resistant patients.

MATERIALS AND METHODS

Model scope

The model describes key physiological processes involved in renal function and its role in maintaining Na and water homeostasis, at the systems level, based on governing physiological and feedback mechanisms (Figure 1). The model is not meant to be an exhaustive molecular to organ level model, but rather, to provide a backbone for further investigation. We first describe modeling of basic renal and cardiovascular functions, based on knowledge of physical and physiological principles and morphology. We then describe key regulatory mechanisms that maintain homeostasis in the presence of perturbations, including intrinsic mechanisms like tubuloglomerular feedback (TGF) and neurohormonal mechanisms like the renin angiotensin aldosterone system (RAAS). Lastly, we describe how key parameters and setpoints were determined.
Figure 1

Schematic representation of the model. Top left: The renal vasculature is modeled by a single preafferent resistance vessel flowing into N parallel nephrons. Bottom left: Sodium and water filtration through the glomerulus is modeled according to Starling's law. Sodium and water are reabsorbed at different fractional rates in the PT, LoH, DCT, and CNT/CD, and sodium and water excretion rates are determined from unabsorbed sodium and water. Top right: Sodium and water excretion feed into the cardiovascular portion of the model, where the balance between excretion and intake determines extracellular fluid volume, plasma sodium concentration, and ultimately cardiac output and MAP. Na concentration and MAP feed back into the renal model (left), closing the loop. Bottom right: Regulatory feedback mechanisms include the RAAS, TGF, myogenic autoregulation, RIHP regulation of tubular Na+ reabsorption, vasopressin regulation of tubular water reabsorption, and local blood flow autoregulation. Variables that provide functional links between the model components are shown in red. Variables that are sensed and drive feedback mechanisms are shown in green.

Schematic representation of the model. Top left: The renal vasculature is modeled by a single preafferent resistance vessel flowing into N parallel nephrons. Bottom left: Sodium and water filtration through the glomerulus is modeled according to Starling's law. Sodium and water are reabsorbed at different fractional rates in the PT, LoH, DCT, and CNT/CD, and sodium and water excretion rates are determined from unabsorbed sodium and water. Top right: Sodium and water excretion feed into the cardiovascular portion of the model, where the balance between excretion and intake determines extracellular fluid volume, plasma sodium concentration, and ultimately cardiac output and MAP. Na concentration and MAP feed back into the renal model (left), closing the loop. Bottom right: Regulatory feedback mechanisms include the RAAS, TGF, myogenic autoregulation, RIHP regulation of tubular Na+ reabsorption, vasopressin regulation of tubular water reabsorption, and local blood flow autoregulation. Variables that provide functional links between the model components are shown in red. Variables that are sensed and drive feedback mechanisms are shown in green.

Renal function

The kidney is modeled as a set of N nephrons, each with a glomerulus (consisting of an afferent arteriole, glomerular capillaries, and efferent arteriole in series) and tubule, consisting of the proximal tubule (PT), loop of Henle (LoH), distal convoluted tubule (DCT), and connecting tubule and collecting duct (CNT/CD) (Figure 1 , top and bottom left). In reality, after the DCT, multiple tubules coalesce into a series of collecting ducts, but the model does not attempt to capture this morphologic complexity.

Renal vasculature

The glomeruli are modeled in parallel, and in series with the preafferent (interlobar, interlobular, and arcuate arterioles) and peritubular vasculature (Figure 1, top left). Glomerular capillary resistance is assumed negligible. Thus, renal vascular resistance RVR is given by: Rpreaff and Rperitubular are lumped resistances describing the total resistance of preafferent and peritubular vasculatures, respectively, while Raa and Rea are the resistances of a single afferent or efferent arteriole, as determined from Pouiselle's law, based on the arteriole's diameter d, length L, and blood viscosity µ: Nnephrons is the number of nephrons. All nephrons are assumed identical, and the model does not account for spatial heterogeneity. Renal blood flow (RBF) is a function of the pressure drop across the kidney and RVR, according to Ohm's law: Renal venous pressure (Prenal‐vein) is treated as a constant. The second term in this equation accounts for lower flow through the efferent arterioles due to GFR. As an approximation, all filtrate is assumed reabsorbed back into the peritubular capillaries, so that peritubular flow is the same as afferent flow.

Glomerular filtration

Single nephron glomerular filtration rate (SNGFR) is defined according to Starling's equation, where Kf is the glomerular ultrafiltration coefficient, Pgc is glomerular capillary hydrostatic pressure, PBow is pressure in the Bowman's space, and πgo‐avg is average glomerular capillary oncotic pressure. Pgc is determined according to Ohm's law: Determination of PBow and πgo‐avg are described in the Supplement.

Tubular Na and water reabsorption and flow rates

The PT reabsorbs a constant fraction of filtered Na load—the glomerulotubular balance phenomenon. Na reabsorption along the PT involves multiple transporters whose expression varies across the different PT segments. We approximate PT Na reabsorption as homogenous along its length, so that the reabsorption rate per unit length Rpt is related to the fractional rate of PT Na reabsorption ηpt and PT length Lpt by: Then Na flow along the length of the tubule is: ΦNa,pt(0) is the filtered Na load, or the product of SNGFR and plasma Na concentration CNa. Water is reabsorbed isoosmotically in the PT, so that flow rate along the PT is: While the PT exhibits glomerulotubular balance, the degree of transport flow‐dependence in distal segments is less well established, although there is evidence of flow‐dependence in each segment.19, 20, 21, 22 To accommodate this uncertainty, the rate of reabsorption per unit length for each distal segment is formulated so that flow‐dependence can be varied. For a given segment, the nominal rate of reabsorption per unit length Ri,0 is: where η is the baseline fractional rate of reabsorption, ΦNa,0(0) is the amount delivered to the segment under baseline conditions, and L is the segment length. Here i is the ascending LoH, DCT, or CNT/CD. The actual reabsorption rate per unit length Ri is then the nominal rate Ri,0 augmented by a flow‐dependent component. For B = 0, there is no flow dependence; for B = 1, changes in reabsorption are directly proportional to flow. Based on experimental data, we use a value of 0.85 for LoH,23 and 1 for the DCT and CNT/CD.19, 20, 21, 22 Na flow along each segment is then: Urine Na excretion is: In the LoH, water is reabsorbed in the water‐permeable descending LoH (DLH) due to the osmotic gradient created by active pumping of Na out of the water‐impermeable ascending limb (ALH). To model this countercurrent mechanism, we borrow from Hoppensteadt and Peskin.18 The highly permeable DLH is assumed to quickly equilibrate with the interstitium. We also assume that all reabsorbed water and Na is picked up by the peritubular capillaries locally, and that Na follows water into the peritubular capillaries at its local concentration. With these assumptions, the Na concentration along the length of the DLH (CNa,DLH) and in the surrounding interstitium (CIS) is18: CNa,DLH(0) and FDLH (0) (the Na concentration and fluid flow rate into the DLH) are the concentration and flow rate out of the PT. Based on mass conservation for Na, water flow rate through the DLH is: Since the ALH is impermeable to water, flow through the ALH is equal to flow at the exit (x = L) of the DLH. The DCT is modeled as impermeable to water, such that flow through the DCT equals flow out of the ALH. Fine regulation of water reabsorption occurs in the CNT/CD, through aquaporin channels regulated by vasopressin. Water reabsorption through aquaporin is represented as a nominal fractional rate, modulated by the normalized vasopressin level (μvasopressin): Urine flow rate Furine is then:

Cardiovascular function

Renal and systemic hemodynamics are integrally linked, and many modeling questions involve understanding the systemic impact of alterations in renal function. Thus, it is necessary to connect the loop between renal function and blood volume, cardiac output, and mean arterial pressure (Figure 1, top right). Here we present a simplistic model of cardiac function sufficient for many research questions. For questions where a detailed representation of cardiac and vascular hemodynamics is critical, one could replace this portion with a more detailed model of cardiovascular hemodynamics (e.g., refs. 24, 25). Systemic water and Na dynamics are modeled with a two‐compartment model of blood and extracellular fluid (ECF), where exchange occurs along an Na concentration gradient. Exchange with the intracellular space is not considered. Blood Na content (MNa,blood) is determined by the time integral of the difference between Na intake and excretion rates, as well as transfer of Na between blood and ECF along the concentration gradient. Blood volume (Vb) is modeled in an analogous manner, where Vecf is blood volume. The Na concentration difference between the blood and ECF drives the transfer of water between compartments. Intracellular fluid volume is treated as a constant. The blood and ECF Na concentrations (CNa,blood and CNa,ecf) are then given by: The mean cardiac filling pressure (Pmf) is a function of blood volume and venous compliance cvenous. Cardiac output (CO) is mean filling pressure divided by resistance to venous return (Rvr). Total peripheral resistance (TPR) is determined by treating systemic and renal vasculatures as parallel resistances, in series with venous resistance: According to Ohm's law, mean arterial pressure (MAP) is then:

Regulatory mechanisms

The above equations describe physical processes of renal function, but do not explain how the kidney and cardiovascular system maintain homeostasis in the face of perturbations. Multiple control mechanisms act on the system to allow simultaneous control of Cna, CO, MAP, glomerular pressure, and RBF. Figure 1 (bottom right) illustrates the regulatory mechanisms included in the model. For each control mechanism, the feedback signal µ is modeled by one of two functional forms. The choice of functional form is determined by whether a steady‐state error is allowed in the controlled variable X. When a steady‐state error is not allowed (i.e., X always eventually returns to the setpoint X0), the effect is defined by a proportional‐integral (PI) controller. The initial feedback signal is proportional to the magnitude of the error (X‐X0), with gain G. But the feedback continues to grow over time as long as any error exists, until the error returns to zero. The integral gain Ki determines the speed of return to steady state. All other mechanisms, for which the controlled variable can deviate from the setpoint at steady state, are described by a logistic equation that produces a saturating response characteristic of biological signals: Here, m defines the slope of the response around the operating point, and S is the maximal response as X goes to

Control of plasma Na concentration by vasopressin

To sustain life, plasma Na concentration must be controlled within a tight range. For a given Na intake/excretion rate, the kidney must excrete exactly the right amount of water to maintain this target concentration. This is achieved through the effects of vasopressin. Changes in plasma osmolality are sensed via osmoreceptors, stimulating vasopressin secretion, which exerts control of water reabsorption in the CNT/CD. To ensure that CNa is maintained at its setpoint CNa,0 at steady state, this process is modeled by a PI controller: The parameters GNa‐vp and Ki‐vp are gains of proportional and integral control, respectively.

Tubular pressure natriuresis

For homeostasis, Na excretion over the long term must exactly match Na intake (the principle of Na balance). Any steady‐state Na imbalance would lead to continuous volume retention or loss, an untenable situation. Pressure‐natriuresis,2 wherein changes in renal perfusion pressure (RPP) induce changes in Na excretion, ensures that Na balance is maintained. RPP, approximated by MAP, can impact Na excretion by two mechanisms. First, it can affect the amount of Na filtered, since glomerular filtration is pressure‐driven. However, glomerular pressure is normally tightly autoregulated over a wide range of MAP. Further, this would imply that a sustained change in Na intake would require a sustained change in blood pressure and GFR to return Na balance. But in most individuals, salt intake has little impact on blood pressure and GFR. The second mechanism by which pressure can affect Na excretion is through effects on tubular Na reabsorption. The existence of this pressure‐natriuresis mechanism is well established,1 but remains surprisingly poorly understood.26, 27 It may be partially achieved through neurohumoral mechanisms including the RAAS, but there is also an intrinsic pressure‐mediated effect on tubular Na reabsorption, where renal interstitial hydrostatic pressure (RIHP) is believed to be the driving signal.28 Exactly how RIHP induces changes in tubular Na transport is not well understood, but may be mediated by Starling forces,29 or changes in Na transporters30 mediated by local or systemic factors.27, 31, 32, 33, 34, 35 Currently, we model a direct effect of RIHP on Na reabsorption in each tubular segment, without attempting to prescribe the mechanisms by which RIHP is sensed and produces changes in Na reabsorption. RIHP is a function of peritubular capillary pressure, and particularly the vasa recta,36, 37 according to Starling's law. Pressure in the peritubular capillaries is calculated according to Ohm's law: As a simplification, we assume an increase in peritubular pressure will generate a proportional increase in RIHP. Since the kidney is encapsulated, we assume interstitial pressure equilibrates and changes in one region are transduced across the kidney. The relationship between RIHP and fractional Na reabsorption rate of each tubular segment is then modeled as: where i = PT, LoH, DCT, or CNT/CD. is the nominal fractional rate of reabsorption for that tubule segment. RIHP defines the setpoint pressure and is determined from RIHP at baseline for normal Na intake. SP‐N,i defines the maximal signal as RIHP goes to

Control of cardiac output

CO, which describes total blood flow to body tissues, returns to normal over days to weeks following a perturbation.38 CO regulation is a complex phenomenon that occurs over multiple time scales, but we focus only on long‐term control (days to weeks), which is thought to be achieved through whole‐body autoregulation—the intrinsic ability of organs to adjust their resistance to maintain constant flow.38 The total effect of local autoregulation of all organs is that TPR is adjusted to maintain CO at a constant resting level. The feedback between CO and TPR is modeled with a PI controller, such that CO is controlled to its steady‐state setpoint CO0.

Tubuloglomerular feedback and myogenic autoregulation

TGF helps stabilize tubular flow by sensing Na concentration in the macula densa (the MD sits between the LoH and DCT; Figure 1, bottom left) and providing a feedback signal to inversely change afferent arteriole diameter. The preglomerular vasculature also responds to changes in perfusion pressure through myogenic vasoconstriction. Together, TGF and myogenic autoregulation exert regulatory effects on glomerular pressure and thus on GFR. Modeling of these mechanisms is described in the Supplement.

Renin angiotensin aldosterone system (RAAS)

The RAAS is an important regulator of renal physiology, and is also implicated in many kidney‐related diseases. Multiple classes of drugs for treating hypertension and kidney disease act through the RAAS. To facilitate modeling of the effects of these drugs alone and in combination, this pathway is modeled in some detail (Figure 1 , bottom right). This pathway model39 and physiologic effects of the RAAS17 have been described previously. The key equations are provided in the Supplementary Material.

Model parameterization

Model parameters can be grouped into three categories: 1) parameters whose normal range is known from human physiology, 2) parameters that can be calculated from other parameters and known steady‐state values of functional variables, and 3) fitting parameters whose values are unknown, but can be estimated based on system responses to perturbation. Table 1 lists parameters whose normal range is known, and the values used for simulations presented here and in the companion article. This includes parameters for renal morphologic properties (e.g., number of nephrons, glomerular ultrafiltration coefficient, tubular dimensions) and functional parameters (e.g., normal plasma Na concentration, CO, water and Na intake). A few parameters (SVR0, RVR0, Rperitubular, ηCNT/CD) were calculated based on values and setpoints for other parameters, as described in the Supplement.
Table 1

Parameters with values that are known from human physiology

ParameterDefinitionNormal rangeValueUnits
CNa,0 Target sodium concentration135‐145140mEq/L
CO0 Cardiac output setpoint4‐85L/min
Cprot Plasma protein concentration6‐87g/dl
cvenous Venous compliance100‐150135mmHg/L
daff,0 Baseline afferent diameter1.2‐1.81.5μm
deff,0 Baseline efferent diameter0.9‐1.21.1μm
Dc, cd Effective CNT/CD diameter15‐2017μm
Dc_dt DCT tubule diameter15‐2017μm
Dc_loh LoH diameter15‐2017μm
Dc_pt PT diameter20‐3527μm
Fwater‐in Water intake rate1‐32L/day
Kf Glomerular ultrafiltration coefficient3‐53.9nl/min‐mmHg
Lcd Length of the CNT/CD8‐1510mm
Ldt Distal tubule length4‐65mm
Lloh_asc Ascending LoH length8‐1510mm
Lloh_des Descending LoH length8‐1510mm
Lpt PT length10‐2014mm
MAP0 Mean arterial pressure setpoint80‐9585mmHg
Nnephrons Number of nephrons∼2e62.00E+06
Pc_asc_loh Ascending LoH control pressure6‐87mmHg
Pc_cd CNT/CD control pressure4‐65mmHg
Pc_des_loh Descending LoH control pressure7‐108mmHg
Pc_dt DCT control pressure5‐76mmHg
Pc_pt PT control pressure15‐2219.4mmHg
Pvenous Venous pressure3‐84mmHg
RBF0 Nominal renal blood flow800‐1,2001,000ml/min
Rpreaff,0 Baseline preafferent resistance10‐2014mmHg‐min/L
Rvr Resistance to venous return1‐21.3mmHg/min/L
βTubular compliance0.2‐0.40.2
µblood Blood viscosity5.00E‐075.00E‐07mmHg‐min
ηdt Nominal DCT fractional sodium reabsorption rate0.4‐0.60.5
ηloh Nominal LoH fractional sodium reabsorption rate0.5‐0.90.88
ηpt Nominal PT fractional sodium reabsorption rate0.5‐0.90.7
ΦNa,in Sodium intake rate50‐200100mmol/day
Parameters with values that are known from human physiology The RAAS pathway parameters have been described in detail previously.39 In short, parameters were determined in a similar way as described above—some parameter values are well known from the literature, and others were calculated to give values of RAAS peptides that fall within the observed range. The list of parameters is given in Table 2 , and the reader is referred to previous publications for further details.
Table 2

Parameters defining the RAAS pathway17

ParameterDefinitionValueUnits
Aaldo‐renin Strength of aldosterone negative feedback on renin secretion−0.1
AAT1‐renin Strength of AT1‐bound AngII negative feedback on renin secretion−1.2
Amd‐ren Strength of effect of MD sodium flow on renin secretion1.25
ACEACE rate of conversion of AngI to AngII48.9hr−1
Aldo0 Baseline aldosterone concentration85mg/dl
AT1‐bound_AngII0 Baseline AT1‐bound AngII16.6fmol/ml
CAT1 AT1 receptor binding rate12.1hr−1
CAT2 AT2 receptor binding rate4hr−1
ChymaseChymase rate of conversion of AngI to AngII1.25hr−1
Kd,AngI AngI degradation rate83.2hr−1
Kd,AngII AngII degradation rate63hr−1
Kd,AT1 AT1‐bound AngII degradation rate3.47hr−1
Kd,renin Renin degradation rate4pg/ml/min
SECrenin,0 Baseline renin secretion rate63pg/ml/min
PRC(0)Baseline plasma renin concentration62.9pg/ml
Parameters defining the RAAS pathway17 The last set of parameters are fitting constants (Table 3). Parameters describing the TGF response were chosen to give a fractional compensation in GFR in the range of 0.4–0.6 for a change in MD flow, as reported experimentally.40 Rate constants for water and Na transfer between the ECF and blood were chosen so that equilibrium happens nearly instantaneously. Determination of the physiologic effects of AT1‐bound AngII and aldosterone were determined based on observed changes in PRA, PRC, and blood pressure in response to therapies targeting the RAAS, as described previously.17 In the next section, we explore the impact of parameter choices for the PI controllers of Na concentration (Eq. 31, GNa‐vasopressin and Ki‐vp) and CO (Eq. 34, GCO‐tpr and Ki‐tpr).
Table 3

Fitting parameters

ParameterDefinitionValue
GCO‐tpr Cardiac output autoregulation gain2
GNa‐vasopressin Vasopressin controller gain1
Ki_vp Integral gain for vasopressin controller0.1
Ki‐tpr Integral gain for systemic vascular resistance controller100
mAT1 Slope of AT1‐bound AngII physiological effects7
maldo Slope of aldosterone physiological effects0.5
mautoreg Preafferent myogenic autoregulation signal slope2
mTGF TGF effect slope0.5
QNa Rate constant – sodium transfer between blood and ECF1
Qwater Vasopressin controller gain1
Saldo,CD Max effect on CD reabsorption as aldosterone goes to infinity0.3
Saldo,DCT Max effect on DCT reabsorption as aldosterone goes to infinity0.1
SAT1,aff Max effect on preafferent resistance as AT1‐bound AngII goes to infinity0.5
SAT1,aldo Max effect on aldosterone as AT1‐bound AngII goes to infinity0.05
SAT1,eff Max effect on efferent resistance as AT1‐bound AngII goes to infinity0.3
SAT1,preaff Max effect on afferent resistance as AT1‐bound AngII goes to infinity0.5
SAT1,PT Max effect on PT sodium reabsorption as AT1‐bound AngII goes to infinity0.1
SAT1,sys Max effect on systemic resistance as AT1‐bound AngII goes to infinity0.02
Sautoreg Max myogenic autoregulatory effect on preafferent resistance0.5
STGF TGF maximal response as Φmd‐sod goes to infinity0.6
SP‐N,LoH Max effect on LoH sodium reabsorption as RIHP goes to infinity3
SP‐N,CD Max effect on CNT/CD sodium reabsorption as RIHP goes to infinity3
SP‐N,DCT Max effect on DCT sodium reabsorption as RIHP goes to infinity3
SP‐N,PT Max effect on PT sodium reabsorption as RIHP goes to infinity3
Fitting parameters The pressure natriuresis mechanism, modeled through effects of RIHP on tubular reabsorption (SP‐N,i), plays a critical role in regulating blood pressure, and impairment in this mechanism may contribute to salt‐sensitive hypertension and alterations in renal hemodynamics. In the companion article, we explore in depth the impact of parameter choice for this feedback mechanism.

Software implementation

The model was implemented in a free open‐source programming software (R 3.1.2). It utilizes the RxODE package.41 Model code is provided in the Supplement, and is also available on Github at https://github.com/hallowkm/RenalModel.

RESULTS

Comparison of model steady‐state outputs with clinically observed measures

Table 4 shows the simulated steady‐state output of key renal and cardiovascular variables for which normal ranges are known from the literature. All model variables fall within the observed ranges.
Table 4

Comparison of simulated steady‐state output variables with known ranges for human physiology

VariableNormal rangeValueUnits
SVR0‐2016.8mmHg‐L/min
CO4‐85L/min
MAP80‐9584mmHg
RVR65‐12080.8mmHg‐L/min
RBF800‐1200999ml/min
RPF450‐750594ml/min
Glomerular Pressure55‐6260mmHg
FPR50‐7869.8%
FDR95‐9998.2%
FENa0.5‐20.5%
Filtration Fraction15‐2016.9%
GFR90‐120100ml/min
SNGFR45‐6050nl/min
Bowman Pressure15‐2219.6mmHg
Na concentration135‐150140mEq/L
MD sodium concentration40‐8061mEq/L
24 hr urine volume2.1L/day
24 hr Na excretion100mEq/day
Aldosterone40‐15086.4pg/ml
PRA0.2‐3.31.02ng/ml/hr
PRC3‐5016.8pg/ml
blood volume3.5‐74.95L
extracellular fluid volume13‐1815L
Comparison of simulated steady‐state output variables with known ranges for human physiology

Modeling of feedback control and homeostasis

A critical feature of the cardiorenal system is the ability to restore homeostasis after perturbations. Under normal physiologic conditions, plasma Na concentration (CNa), blood pressure, and blood flows (CO and RBF) are maintained at stable levels. Under pathophysiological conditions (hypertension, kidney injury, cardiac dysfunction), control of variables that are less critical to life (e.g., blood pressure, RBF) may be sacrificed at the expense of the most critical—CNa and CO. Drugs that act by perturbing renal Na handling or blood volume/CO will invoke these feedback mechanism. Thus, any model seeking to describe the long‐term renal and systemic hemodynamic response to therapies must be able to describe the return of CNa and CO to their setpoint after perturbation. Control of CNa is achieved through the action of vasopressin on water reabsorption in the CNT/CD, allowing water excretion to be decoupled from Na excretion. We used a PI controller as a mathematical construct to represent this complex and incompletely understood process. The gains of this controller must be chosen to reproduce the ultimate effect of this mechanism: maintenance of CNa at equilibrium levels (±1 mmol/L) after a perturbation such as an increase in Na intake.42, 43 Figure 2 a shows the CNa response to a step change (doubling) in Na intake, for different controller gains. When no integral controller is included (Ki‐vp = 0), a change in Na intake produces a steady‐state error in CNa, and the size of this error varies inversely with GNa‐vp. Introducing the integral controller (Ki‐vp >0) ensures that there is no steady‐state error. The magnitude of the integral gain Ki‐vp determines the speed at which the system returns to steady state. However, if Ki‐vp is made too large relative to the proportional gain G, oscillations result. Thus, values for proportional and integral gain were set so that after a perturbation, CNa deviated less than 1 mmol/L and returned to the setpoint without overshoot.
Figure 2

Impact of choice of controller gains for proportional‐integral feedback controllers on the response of cardiac output (a) and Na concentration (b) to a perturbation (step increase in Na intake). Gains were chosen so that these variables quickly returned to steady state without oscillations (yellow lines).

Impact of choice of controller gains for proportional‐integral feedback controllers on the response of cardiac output (a) and Na concentration (b) to a perturbation (step increase in Na intake). Gains were chosen so that these variables quickly returned to steady state without oscillations (yellow lines). Control of CO, achieved physiologically through changes in whole‐body resistance over days to weeks in response to changes in tissue blood flow throughout the body,38 was modeled similarly. Figure 2 b shows the simulated CO response to a step increase in Na intake, for different controller gains. When no integral controller is included (Ki‐tpr = 0), a perturbation produces a steady‐state error in CO and this is inversely proportional to the value of the proportional gain (GCO‐tpr). Including an integral controller (Ki‐vp >0) eliminates the steady‐state error, and the magnitude of the integral gain determines the speed at which the system returns to steady state. Thus, values for proportional and integral gain were set so that after a perturbation, cardiac output returned to the setpoint over a few days without overshoot, as is observed experimentally.38

DISCUSSION

Here we presented a model of renal function and systemic hemodynamics that may serve as a starting point for many systems pharmacology applications in renal and cardiovascular disease. The model equations, code, and parameters are made fully available for review and use. We believe that a common open‐source model is an important starting point for advancing the use of QSP modeling in renal physiology, pharmacology, and drug development. The model draws from previously published models, and incorporates core components of renal function and control necessary to model most problems related to renal function. The key strengths of the model are that it integrates a mechanistic representation of kidney filtration and reabsorption with systemic control of Na and water homeostasis, and allows simulation of key clinical endpoints: GFR, MAP, Na excretion, RAAS biomarkers, etc. The model is not an exhaustive description of renal physiology, but rather provides a starting point that can be refined as needed to address new questions. For instance, representation of PT transport could be refined if one wished to model a particular transport inhibitor. Neurohormonal feedbacks could be refined or represented in greater detail as needed to model effects of a treatment targeting that pathway. The vascular and cardiac representation in the model could be expanded, for instance, to address questions related to the renal effects on heart failure. In a companion article, we describe the application of this model to test hypotheses regarding mechanisms of salt‐sensitive hypertension and the differential response to antihypertensive therapy in salt‐resistant compared to salt‐sensitive subjects. Supporting Information Click here for additional data file. Supporting Information Click here for additional data file. Supporting Information Click here for additional data file. Supporting Information Click here for additional data file. Supporting Information Click here for additional data file.
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1.  Flow-dependent transport in a mathematical model of rat proximal tubule.

Authors:  Alan M Weinstein; Sheldon Weinbaum; Yi Duan; Zhaopeng Du; Qingshang Yan; Tong Wang
Journal:  Am J Physiol Renal Physiol       Date:  2007-01-09

Review 2.  Mechanisms of proximal tubule sodium transport regulation that link extracellular fluid volume and blood pressure.

Authors:  Alicia A McDonough
Journal:  Am J Physiol Regul Integr Comp Physiol       Date:  2010-01-27       Impact factor: 3.619

3.  A model-based approach to investigating the pathophysiological mechanisms of hypertension and response to antihypertensive therapies: extending the Guyton model.

Authors:  K Melissa Hallow; Arthur Lo; Jeni Beh; Manoj Rodrigo; Sergey Ermakov; Stuart Friedman; Hector de Leon; Anamika Sarkar; Yuan Xiong; Ramesh Sarangapani; Henning Schmidt; Randy Webb; Anna Georgieva Kondic
Journal:  Am J Physiol Regul Integr Comp Physiol       Date:  2014-02-05       Impact factor: 3.619

Review 4.  Integrated control of Na transport along the nephron.

Authors:  Lawrence G Palmer; Jürgen Schnermann
Journal:  Clin J Am Soc Nephrol       Date:  2014-08-06       Impact factor: 8.237

5.  A mathematical model of fluid transport in the kidney.

Authors:  P K Jensen; O Christensen; K Steven
Journal:  Acta Physiol Scand       Date:  1981-08

6.  High dietary sodium chloride consumption may not induce body fluid retention in humans.

Authors:  M Heer; F Baisch; J Kropp; R Gerzer; C Drummer
Journal:  Am J Physiol Renal Physiol       Date:  2000-04

Review 7.  Transepithelial osmolality differences, hydraulic conductivities, and volume absorption in the proximal tubule.

Authors:  J A Schafer
Journal:  Annu Rev Physiol       Date:  1990       Impact factor: 19.318

8.  Characteristics of the relationship between the flow rate of tubular fluid and potassium transport in the distal tubule of the rat.

Authors:  R T Kunau; H L Webb; S C Borman
Journal:  J Clin Invest       Date:  1974-12       Impact factor: 14.808

9.  A Tutorial on RxODE: Simulating Differential Equation Pharmacometric Models in R.

Authors:  W Wang; K M Hallow; D A James
Journal:  CPT Pharmacometrics Syst Pharmacol       Date:  2015-12-19

10.  Mechanisms of pressure-diuresis and pressure-natriuresis in Dahl salt-resistant and Dahl salt-sensitive rats.

Authors:  Daniel A Beard; Muriel Mescam
Journal:  BMC Physiol       Date:  2012-05-14
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  14 in total

Review 1.  Translational Quantitative Systems Pharmacology in Drug Development: from Current Landscape to Good Practices.

Authors:  Jane P F Bai; Justin C Earp; Venkateswaran C Pillai
Journal:  AAPS J       Date:  2019-06-03       Impact factor: 4.009

2.  Benchmarking renin suppression and blood pressure reduction of direct renin inhibitor imarikiren through quantitative systems pharmacology modeling.

Authors:  Yeshitila Gebremichael; Gezim Lahu; Majid Vakilynejad; K Melissa Hallow
Journal:  J Pharmacokinet Pharmacodyn       Date:  2018-11-16       Impact factor: 2.745

3.  Modeling the Steady-State Effects of Mean Arterial Pressure on the Kidneys.

Authors:  Benjamin J Czerwin; Sandip Patel; Caitlyn M Chiofolo; Jiayao Yuan; Nicolas W Chbat
Journal:  IEEE Open J Eng Med Biol       Date:  2020-11-06

4.  Evaluation of renal and cardiovascular protection mechanisms of SGLT2 inhibitors: model-based analysis of clinical data.

Authors:  K Melissa Hallow; Peter J Greasley; Gabriel Helmlinger; Lulu Chu; Hiddo J Heerspink; David W Boulton
Journal:  Am J Physiol Renal Physiol       Date:  2018-07-18

5.  A Quantitative Systems Physiology Model of Renal Function and Blood Pressure Regulation: Application in Salt-Sensitive Hypertension.

Authors:  K M Hallow; Y Gebremichael
Journal:  CPT Pharmacometrics Syst Pharmacol       Date:  2017-05-27

6.  Mathematical model of hemodynamic mechanisms and consequences of glomerular hypertension in diabetic mice.

Authors:  Hari Shankar Mahato; Christine Ahlstrom; Rasmus Jansson-Löfmark; Ulrika Johansson; Gabriel Helmlinger; K Melissa Hallow
Journal:  NPJ Syst Biol Appl       Date:  2018-12-10

Review 7.  Reproducibility of Quantitative Systems Pharmacology Models: Current Challenges and Future Opportunities.

Authors:  Daniel C Kirouac; Brian Cicali; Stephan Schmidt
Journal:  CPT Pharmacometrics Syst Pharmacol       Date:  2019-03-03

8.  Considerations for Adapting Pre-existing Mechanistic Quantitative Systems Pharmacology Models for New Research Contexts.

Authors:  Michael Weis; Rebecca Baillie; Christina Friedrich
Journal:  Front Pharmacol       Date:  2019-04-18       Impact factor: 5.810

Review 9.  Quantitative Systems Pharmacology: An Exemplar Model-Building Workflow With Applications in Cardiovascular, Metabolic, and Oncology Drug Development.

Authors:  Gabriel Helmlinger; Victor Sokolov; Kirill Peskov; Karen M Hallow; Yuri Kosinsky; Veronika Voronova; Lulu Chu; Tatiana Yakovleva; Ivan Azarov; Daniel Kaschek; Artem Dolgun; Henning Schmidt; David W Boulton; Robert C Penland
Journal:  CPT Pharmacometrics Syst Pharmacol       Date:  2019-06-11

10.  Cardiorenal Systems Modeling: Left Ventricular Hypertrophy and Differential Effects of Antihypertensive Therapies on Hypertrophy Regression.

Authors:  K Melissa Hallow; Charles H Van Brackle; Sommer Anjum; Sergey Ermakov
Journal:  Front Physiol       Date:  2021-06-16       Impact factor: 4.566

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