Literature DB >> 26526852

The High-Resolution Structure of Activated Opsin Reveals a Conserved Solvent Network in the Transmembrane Region Essential for Activation.

Elise Blankenship1, Ardeschir Vahedi-Faridi2, David T Lodowski3.   

Abstract

Rhodopsin, a light-activated G protein coupled receptor (GPCR), has been the subject of numerous biochemical and structural investigations, serving as a model receptor for GPCRs and their activation. We present the 2.3-Å resolution structure of native source rhodopsin stabilized in a conformation competent for G protein binding. An extensive water-mediated hydrogen bond network linking the chromophore binding site to the site of G protein binding is observed, providing connections to conserved motifs essential for GPCR activation. Comparison of this extensive solvent-mediated hydrogen-bonding network with the positions of ordered solvent in earlier crystallographic structures of rhodopsin photointermediates reveals both static structural and dynamic functional water-protein interactions present during the activation process. When considered along with observations that solvent occupies similar positions in the structures of other GPCRs, these analyses strongly support an integral role for this dynamic ordered water network in both rhodopsin and GPCR activation.
Copyright © 2015 Elsevier Ltd. All rights reserved.

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Year:  2015        PMID: 26526852      PMCID: PMC4670590          DOI: 10.1016/j.str.2015.09.015

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  45 in total

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Journal:  Angew Chem Int Ed Engl       Date:  2013-08-26       Impact factor: 15.336

2.  Light-activated rhodopsin induces structural binding motif in G protein alpha subunit.

Authors:  O G Kisselev; J Kao; J W Ponder; Y C Fann; N Gautam; G R Marshall
Journal:  Proc Natl Acad Sci U S A       Date:  1998-04-14       Impact factor: 11.205

3.  Constitutive activation of opsin by mutation of methionine 257 on transmembrane helix 6.

Authors:  M Han; S O Smith; T P Sakmar
Journal:  Biochemistry       Date:  1998-06-02       Impact factor: 3.162

4.  Rhodopsin-transducin heteropentamer: three-dimensional structure and biochemical characterization.

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Authors:  David T Lodowski; Thomas E Angel; Krzysztof Palczewski
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  15 in total

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2.  G protein-coupled receptors: the evolution of structural insight.

Authors:  Samantha B Gacasan; Daniel L Baker; Abby L Parrill
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3.  A benchmark study of loop modeling methods applied to G protein-coupled receptors.

Authors:  Lee H Wink; Daniel L Baker; Judith A Cole; Abby L Parrill
Journal:  J Comput Aided Mol Des       Date:  2019-05-23       Impact factor: 3.686

4.  In Silico Studies Targeting G-protein Coupled Receptors for Drug Research Against Parkinson's Disease.

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Review 7.  Rhodopsins: An Excitingly Versatile Protein Species for Research, Development and Creative Engineering.

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Journal:  Front Chem       Date:  2022-06-22       Impact factor: 5.545

8.  G Protein-Coupled Receptors Contain Two Conserved Packing Clusters.

Authors:  Omar B Sanchez-Reyes; Aidan L G Cooke; Dale B Tranter; Dawood Rashid; Markus Eilers; Philip J Reeves; Steven O Smith
Journal:  Biophys J       Date:  2017-06-06       Impact factor: 3.699

9.  Structure of CC chemokine receptor 2 with orthosteric and allosteric antagonists.

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Journal:  Nature       Date:  2016-12-07       Impact factor: 49.962

Review 10.  Structural aspects of rod opsin and their implication in genetic diseases.

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