Literature DB >> 28510063

Structural gymnastics of multifunctional metamorphic proteins.

Sophia C Goodchild1, Paul M G Curmi2,3, Louise J Brown4.   

Abstract

The classic structure-function paradigm holds that a protein exhibits a single well-defined native state that gives rise to its biological function. Nonetheless, over the past few decades, numerous examples of proteins exhibiting biological function arising from multiple structural states of varying disorder have been identified. Most recently, several examples of 'metamorphic proteins', able to interconvert between vastly different native-like topologies under physiological conditions, have been characterised with multiple functions. In this review, we look at the concept of protein metamorphosis in relation to the current understanding of the protein structure-function landscape. Although structural dynamism observed for metamorphic proteins provides a novel source of functional versatility, the dynamic nature of the metamorphic proteins generally makes them difficult to identify and probe using conventional protein structure determination methods. However, as the existence of metamorphic proteins has now been established and techniques enabling the analysis of multiple protein conformers are improving, it is likely that this class will continue to grow in number.

Keywords:  CLIC1; Lymphotactin; Mad2; Metamorphic proteins

Year:  2011        PMID: 28510063      PMCID: PMC5425669          DOI: 10.1007/s12551-011-0053-8

Source DB:  PubMed          Journal:  Biophys Rev        ISSN: 1867-2450


  63 in total

1.  Structure of a T7 RNA polymerase elongation complex at 2.9 A resolution.

Authors:  Tahir H Tahirov; Dmitry Temiakov; Michael Anikin; Vsevolod Patlan; William T McAllister; Dmitry G Vassylyev; Shigeyuki Yokoyama
Journal:  Nature       Date:  2002-10-09       Impact factor: 49.962

2.  Molecular contortionism - on the physical limits of serpin 'loop-sheet' polymers.

Authors:  James A Huntington; James C Whisstock
Journal:  Biol Chem       Date:  2010-08       Impact factor: 3.915

3.  Crystal structure of the soluble form of the redox-regulated chloride ion channel protein CLIC4.

Authors:  Dene R Littler; Nagi N Assaad; Stephen J Harrop; Louise J Brown; Greg J Pankhurst; Paolo Luciani; Marie-Isabel Aguilar; Michele Mazzanti; Mark A Berryman; Samuel N Breit; Paul M G Curmi
Journal:  FEBS J       Date:  2005-10       Impact factor: 5.542

4.  A protein folding pathway with multiple folding intermediates at atomic resolution.

Authors:  Hanqiao Feng; Zheng Zhou; Yawen Bai
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-25       Impact factor: 11.205

5.  Structural basis for the transition from initiation to elongation transcription in T7 RNA polymerase.

Authors:  Y Whitney Yin; Thomas A Steitz
Journal:  Science       Date:  2002-09-19       Impact factor: 47.728

6.  Structure of the Janus protein human CLIC2.

Authors:  Brett A Cromer; Michael A Gorman; Guido Hansen; Julian J Adams; Marjorie Coggan; Dene R Littler; Louise J Brown; Michele Mazzanti; Samuel N Breit; Paul M G Curmi; Angela F Dulhunty; Philip G Board; Michael W Parker
Journal:  J Mol Biol       Date:  2007-09-20       Impact factor: 5.469

Review 7.  The formation and stabilization of protein structure.

Authors:  C B Anfinsen
Journal:  Biochem J       Date:  1972-07       Impact factor: 3.857

8.  An engineered second disulfide bond restricts lymphotactin/XCL1 to a chemokine-like conformation with XCR1 agonist activity.

Authors:  Robbyn L Tuinstra; Francis C Peterson; E Sonay Elgin; Adam J Pelzek; Brian F Volkman
Journal:  Biochemistry       Date:  2007-02-16       Impact factor: 3.162

9.  The glutathione transferase structural family includes a nuclear chloride channel and a ryanodine receptor calcium release channel modulator.

Authors:  A Dulhunty; P Gage; S Curtis; G Chelvanayagam; P Board
Journal:  J Biol Chem       Date:  2000-10-16       Impact factor: 5.157

10.  The organellular chloride channel protein CLIC4/mtCLIC translocates to the nucleus in response to cellular stress and accelerates apoptosis.

Authors:  Kwang S Suh; Michihiro Mutoh; Kunio Nagashima; Ester Fernandez-Salas; Lindsay E Edwards; Daniel D Hayes; John M Crutchley; Keith G Marin; Rebecca A Dumont; Joshua M Levy; Christina Cheng; Susan Garfield; Stuart H Yuspa
Journal:  J Biol Chem       Date:  2003-11-10       Impact factor: 5.157

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  14 in total

Review 1.  Conditionally disordered proteins: bringing the environment back into the fold.

Authors:  Andrew C Hausrath; Richard L Kingston
Journal:  Cell Mol Life Sci       Date:  2017-06-08       Impact factor: 9.261

Review 2.  HIV-1 Reverse Transcriptase: A Metamorphic Protein with Three Stable States.

Authors:  Robert E London
Journal:  Structure       Date:  2019-01-10       Impact factor: 5.006

3.  Dimer dissociation is a key energetic event in the fold-switch pathway of KaiB.

Authors:  Maira Rivera; Pablo Galaz-Davison; Ignacio Retamal-Farfán; Elizabeth A Komives; César A Ramírez-Sarmiento
Journal:  Biophys J       Date:  2022-02-11       Impact factor: 4.033

4.  MinE conformational switching confers robustness on self-organized Min protein patterns.

Authors:  Jonas Denk; Simon Kretschmer; Jacob Halatek; Caroline Hartl; Petra Schwille; Erwin Frey
Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-16       Impact factor: 11.205

5.  Extant fold-switching proteins are widespread.

Authors:  Lauren L Porter; Loren L Looger
Journal:  Proc Natl Acad Sci U S A       Date:  2018-05-21       Impact factor: 11.205

6.  Unveiling the activation dynamics of a fold-switch bacterial glycosyltransferase by 19F NMR.

Authors:  Jobst Liebau; Montse Tersa; Beatriz Trastoy; Joan Patrick; Ane Rodrigo-Unzueta; Francisco Corzana; Tobias Sparrman; Marcelo E Guerin; Lena Mäler
Journal:  J Biol Chem       Date:  2020-05-20       Impact factor: 5.157

7.  Structure of the Hydrophobic Core Determines the 3D Protein Structure-Verification by Single Mutation Proteins.

Authors:  Mateusz Banach; Piotr Fabian; Katarzyna Stapor; Leszek Konieczny; And Irena Roterman
Journal:  Biomolecules       Date:  2020-05-14

Review 8.  Functional and Regulatory Roles of Fold-Switching Proteins.

Authors:  Allen K Kim; Lauren L Porter
Journal:  Structure       Date:  2020-11-10       Impact factor: 5.006

9.  Metamorphic Protein Folding Encodes Multiple Anti-Candida Mechanisms in XCL1.

Authors:  Acacia F Dishman; Jie He; Brian F Volkman; Anna R Huppler
Journal:  Pathogens       Date:  2021-06-17

10.  Transcriptome analysis of chloride intracellular channel knockdown in Drosophila identifies oxidation-reduction function as possible mechanism of altered sensitivity to ethanol sedation.

Authors:  Rory M Weston; Rebecca E Schmitt; Mike Grotewiel; Michael F Miles
Journal:  PLoS One       Date:  2021-07-06       Impact factor: 3.240

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