Literature DB >> 28463807

A genomic audit of newly-adopted autosomal STRs for forensic identification.

C Phillips1.   

Abstract

In preparation for the growing use of massively parallel sequencing (MPS) technology to genotype forensic STRs, a comprehensive genomic audit of 73 STRs was made in 2016 [Parson et al., Forensic Sci. Int. Genet. 22, 54-63]. The loci examined included miniSTRs that were not in widespread use, but had been incorporated into MPS kits or were under consideration for this purpose. The current study expands the genomic analysis of autosomal STRs that are not commonly used, to include the full set of developed miniSTRs and an additional 24 STRs, most of which have been recently included in several supplementary forensic multiplex kits for capillary electrophoresis. The genomic audit of these 47 newly-adopted STRs examined the linkage status of new loci on the same chromosome as established forensic STRs; analyzed world-wide population variation of the newly-adopted STRs using published data; assessed their forensic informativeness; and compiled the sequence characteristics, repeat structures and flanking regions of each STR. A further 44 autosomal STRs developed for forensic analyses but not incorporated into commercial kits, are also briefly described.
Copyright © 2017 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Autosomal STRs; HGDP-CEPH; Linkage; Sequence data; Supplementary markers

Mesh:

Year:  2017        PMID: 28463807     DOI: 10.1016/j.fsigen.2017.04.011

Source DB:  PubMed          Journal:  Forensic Sci Int Genet        ISSN: 1872-4973            Impact factor:   4.882


  5 in total

1.  STRSeq: A catalog of sequence diversity at human identification Short Tandem Repeat loci.

Authors:  Katherine Butler Gettings; Lisa A Borsuk; David Ballard; Martin Bodner; Bruce Budowle; Laurence Devesse; Jonathan King; Walther Parson; Christopher Phillips; Peter M Vallone
Journal:  Forensic Sci Int Genet       Date:  2017-09-01       Impact factor: 4.882

2.  Development and validation of a novel 133-plex forensic STR panel (52 STRs and 81 Y-STRs) using single-end 400 bp massive parallel sequencing.

Authors:  Haoliang Fan; Lingxiang Wang; Changhui Liu; Xiaoyu Lu; Xuding Xu; Kai Ru; Pingming Qiu; Chao Liu; Shao-Qing Wen
Journal:  Int J Legal Med       Date:  2021-11-06       Impact factor: 2.791

3.  Multiple genetic analyses to investigate the polymorphisms of Chinese Mongolian population with an efficient short tandem repeat panel.

Authors:  Yating Fang; Tong Xie; Qiong Lan; Xiaoye Jin; Yuxin Guo; Yongsong Zhou; Jiangwei Yan; Bofeng Zhu
Journal:  Croat Med J       Date:  2019-06-13       Impact factor: 1.351

4.  An evaluation of the SureID 23comp Human Identification Kit for kinship testing.

Authors:  Hussain M Alsafiah; Ali A Aljanabi; Sibte Hadi; Saleh S Alturayeif; William Goodwin
Journal:  Sci Rep       Date:  2019-11-14       Impact factor: 4.379

5.  The STRidER Report on Two Years of Quality Control of Autosomal STR Population Datasets.

Authors:  Martin Bodner; Walther Parson
Journal:  Genes (Basel)       Date:  2020-08-07       Impact factor: 4.096

  5 in total

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