Literature DB >> 28442531

Gene body DNA methylation conspires with H3K36me3 to preclude aberrant transcription.

Aurélie Teissandier1, Déborah Bourc'his1.   

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Year:  2017        PMID： 28442531      PMCID： PMC5452023          DOI： 10.15252/embj.201796812

Source DB:  PubMed          Journal:  EMBO J        ISSN： 0261-4189            Impact factor:   11.598


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  12 in total

Review 1.  Understanding the language of Lys36 methylation at histone H3.

Authors:  Eric J Wagner; Phillip B Carpenter
Journal:  Nat Rev Mol Cell Biol       Date:  2012-01-23       Impact factor: 94.444

2.  Conservation and divergence of methylation patterning in plants and animals.

Authors:  Suhua Feng; Shawn J Cokus; Xiaoyu Zhang; Pao-Yang Chen; Magnolia Bostick; Mary G Goll; Jonathan Hetzel; Jayati Jain; Steven H Strauss; Marnie E Halpern; Chinweike Ukomadu; Kirsten C Sadler; Sriharsa Pradhan; Matteo Pellegrini; Steven E Jacobsen
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-15       Impact factor: 11.205

3.  Comparative methylomics reveals gene-body H3K36me3 in Drosophila predicts DNA methylation and CpG landscapes in other invertebrates.

Authors:  Lisa Nanty; Guillermo Carbajosa; Graham A Heap; Francis Ratnieks; David A van Heel; Thomas A Down; Vardhman K Rakyan
Journal:  Genome Res       Date:  2011-09-22       Impact factor: 9.043

4.  Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription.

Authors:  Michael J Carrozza; Bing Li; Laurence Florens; Tamaki Suganuma; Selene K Swanson; Kenneth K Lee; Wei-Jong Shia; Scott Anderson; John Yates; Michael P Washburn; Jerry L Workman
Journal:  Cell       Date:  2005-11-18       Impact factor: 41.582

5.  DNA methylation and SETDB1/H3K9me3 regulate predominantly distinct sets of genes, retroelements, and chimeric transcripts in mESCs.

Authors:  Mohammad M Karimi; Preeti Goyal; Irina A Maksakova; Misha Bilenky; Danny Leung; Jie Xin Tang; Yoichi Shinkai; Dixie L Mager; Steven Jones; Martin Hirst; Matthew C Lorincz
Journal:  Cell Stem Cell       Date:  2011-06-03       Impact factor: 24.633

6.  Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation.

Authors:  Tuncay Baubec; Daniele F Colombo; Christiane Wirbelauer; Juliane Schmidt; Lukas Burger; Arnaud R Krebs; Altuna Akalin; Dirk Schübeler
Journal:  Nature       Date:  2015-01-21       Impact factor: 49.962

7.  Human DNA methylomes at base resolution show widespread epigenomic differences.

Authors:  Ryan Lister; Mattia Pelizzola; Robert H Dowen; R David Hawkins; Gary Hon; Julian Tonti-Filippini; Joseph R Nery; Leonard Lee; Zhen Ye; Que-Minh Ngo; Lee Edsall; Jessica Antosiewicz-Bourget; Ron Stewart; Victor Ruotti; A Harvey Millar; James A Thomson; Bing Ren; Joseph R Ecker
Journal:  Nature       Date:  2009-10-14       Impact factor: 49.962

8.  An epigenetic switch ensures transposon repression upon dynamic loss of DNA methylation in embryonic stem cells.

Authors:  Marius Walter; Aurélie Teissandier; Raquel Pérez-Palacios; Déborah Bourc'his
Journal:  Elife       Date:  2016-01-27       Impact factor: 8.140

9.  Conserved role of intragenic DNA methylation in regulating alternative promoters.

Authors:  Alika K Maunakea; Raman P Nagarajan; Mikhail Bilenky; Tracy J Ballinger; Cletus D'Souza; Shaun D Fouse; Brett E Johnson; Chibo Hong; Cydney Nielsen; Yongjun Zhao; Gustavo Turecki; Allen Delaney; Richard Varhol; Nina Thiessen; Ksenya Shchors; Vivi M Heine; David H Rowitch; Xiaoyun Xing; Chris Fiore; Maximiliaan Schillebeeckx; Steven J M Jones; David Haussler; Marco A Marra; Martin Hirst; Ting Wang; Joseph F Costello
Journal:  Nature       Date:  2010-07-08       Impact factor: 49.962

10.  In vivo targeting of de novo DNA methylation by histone modifications in yeast and mouse.

Authors:  Marco Morselli; William A Pastor; Barbara Montanini; Kevin Nee; Roberto Ferrari; Kai Fu; Giancarlo Bonora; Liudmilla Rubbi; Amander T Clark; Simone Ottonello; Steven E Jacobsen; Matteo Pellegrini
Journal:  Elife       Date:  2015-04-07       Impact factor: 8.140
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  29 in total

1.  Sex-specific DNA methylation differences in people exposed to polybrominated biphenyl.

Authors:  Sarah W Curtis; Sabrina A Gerkowicz; Dawayland O Cobb; Varun Kilaru; Metrecia L Terrell; M Elizabeth Marder; Dana Boyd Barr; Carmen J Marsit; Michele Marcus; Karen N Conneely; Alicia K Smith
Journal:  Epigenomics       Date:  2020-06-04       Impact factor: 4.778

2.  Spurious transcription and its impact on cell function.

Authors:  Joseph T Wade; David C Grainger
Journal:  Transcription       Date:  2017-11-03

3.  The N-Terminal Tail of Histone H3 Regulates Copper Homeostasis in Saccharomyces cerevisiae.

Authors:  Sakshi Singh; Rakesh Kumar Sahu; Raghuvir Singh Tomar
Journal:  Mol Cell Biol       Date:  2021-01-25       Impact factor: 4.272

4.  miR-26a-5p Suppresses Wnt/β-Catenin Signaling Pathway by Inhibiting DNMT3A-Mediated SFRP1 Methylation and Inhibits Cancer Stem Cell-Like Properties of NSCLC.

Authors:  Jie Yu; Zhe Ge; Shunqiong Chen; Shaoying Li; Xin Zhang; Jie Hu; Wei Guo; Yan Wang
Journal:  Dis Markers       Date:  2022-07-11       Impact factor: 3.464

5.  Cyclic DNA remethylation following active demethylation at euchromatic regions in mouse embryonic stem cells.

Authors:  Musashi Kubiura-Ichimaru; Takamasa Ito; Louis Lefebvre; Masako Tada
Journal:  Chromosome Res       Date:  2020-11-17       Impact factor: 5.239

Review 6.  Dynamic DNA methylation: In the right place at the right time.

Authors:  Chongyuan Luo; Petra Hajkova; Joseph R Ecker
Journal:  Science       Date:  2018-09-28       Impact factor: 47.728

7.  Meta-Analyses of Splicing and Expression Quantitative Trait Loci Identified Susceptibility Genes of Glioma.

Authors:  C Pawan K Patro; Darryl Nousome; Rose K Lai
Journal:  Front Genet       Date:  2021-04-15       Impact factor: 4.772

8.  Gene body methylation is under selection in Arabidopsis thaliana.

Authors:  Aline Muyle; Jeffrey Ross-Ibarra; Danelle K Seymour; Brandon S Gaut
Journal:  Genetics       Date:  2021-06-24       Impact factor: 4.562

Review 9.  Histone sumoylation and chromatin dynamics.

Authors:  Hong-Yeoul Ryu; Mark Hochstrasser
Journal:  Nucleic Acids Res       Date:  2021-06-21       Impact factor: 16.971

10.  Loosening chromatin and dysregulated transcription: a perspective on cryptic transcription during mammalian aging.

Authors:  Brenna S McCauley; Weiwei Dang
Journal:  Brief Funct Genomics       Date:  2022-01-25       Impact factor: 4.840
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