| Literature DB >> 28428130 |
Katrina Abuabara1, Alexa M Magyari2, Ole Hoffstad3, Zarif K Jabbar-Lopez4, Liam Smeeth5, Hywel C Williams6, Joel M Gelfand7, David J Margolis7, Sinead M Langan5.
Abstract
Electronic health records hold great promise for clinical and epidemiologic research. Undertaking atopic eczema (AE) research using such data is challenging because of its episodic and heterogeneous nature. We sought to develop and validate a diagnostic algorithm that identifies AE cases based on codes used for electronic records used in the UK Health Improvement Network. We found that at least one of five diagnosis codes plus two treatment codes for any skin-directed therapy were likely to accurately identify patients with AE. To validate this algorithm, a questionnaire was sent to the physicians of 200 randomly selected children and adults. The primary outcome, positive predictive value for a physician-confirmed diagnosis of AE, was 86% (95% confidence interval = 80-91). Additional criteria increased the PPV up to 95% but would miss up to 89% of individuals with physician-confirmed AE. The first and last entered diagnosis codes for individuals showed good agreement with the physician-confirmed age at onset and last disease activity; the mean difference was 0.8 years (95% confidence interval = -0.3 to 1.9) and -1.3 years (95% confidence interval = -2.5 to -0.1), respectively. A combination of diagnostic and prescription codes can be used to reliably estimate the diagnosis and duration of AE from The Health Improvement Network primary care electronic health records in the UK.Entities:
Mesh:
Year: 2017 PMID: 28428130 PMCID: PMC5883318 DOI: 10.1016/j.jid.2017.03.029
Source DB: PubMed Journal: J Invest Dermatol ISSN: 0022-202X Impact factor: 8.551
Distribution of codes in the entire THIN database, %
| Codes | Total | Children (Ages 0–17) | Adults (Ages 18+) |
|---|---|---|---|
| N = 9,775,618 | n = 1,404,158 | n = 8,371,460 | |
| Diagnosis codes | |||
| AD/eczema M111.00 | 6 | 13 | 5 |
| Infantile eczema M112.00 | 1 | 7 | 0 |
| Flexural eczema M113.00 | 1 | 2 | 0 |
| Allergic/intrinsic eczema M114.00 | 0 | 0 | 0 |
| Eczema not otherwise specified M12z100 | 6 | 8 | 6 |
| One or more of the five codes listed above | 13 | 23 | 11 |
| Two or more of the five codes listed above | 4 | 10 | 4 |
| One or more of 32 likely eczema codes | 14 | 25 | 13 |
| One or more of 74 possible eczema codes | 29 | 47 | 26 |
| Prescription codes | |||
| One or more prescription for any AD-related therapy | 45 | 57 | 42 |
| One or more prescription for a topical steroid or calcineurin inhibitor | 39 | 42 | 38 |
| One or more prescription for an AD-related systemic treatment | 1 | 0 | 1 |
| Other codes | |||
| One or more exclusionary condition | 7 | 3 | 8 |
| One or more dermatology consult code | 4 | 2 | 5 |
| One or more biopsy or patch testing code | 1 | 0 | 1 |
Abbreviation: AD, atopic dermatitis.
Ages as of January 2013; among adults, codes may have occurred before age 18 years.
See Supplementary Table S1.
Includes topical skin preparations, topical steroids, topical calcineurin inhibitors, topical anti-infective treatments, and systemic treatments (including methotrexate, azathioprine, mycophenolate, cyclosporine, biologics, or phototherapy); see Supplementary Table S2.
See Supplementary Table S3 online.
Figure 1Flow chart showing the sampling of patients from THIN and resulting classification.∗Any of the five most commonly used Read codes (atopic dermatitis/eczema M111.00, infantile eczema M112.00, flexural eczema M113.00, allergic/intrinsic eczema M114.00, or eczema not otherwise specified M12z100). ∗∗Any code for topical emollients, topical steroids, topical calcineurin inhibitors, topical anti-infective treatments, systemic immunomodulatory medications (including methotrexate, azathioprine, mycophenolate, cyclosporine, or biologics) or phototherapy on separate days; see Supplementary Table S2). AIS, Additional Information Services; THIN, The Health Improvement Network.
Survey sample characteristics
| Survey Responses | Total | Confirmed Eczema | No Eczema | Chi-Square or Fisher’s |
|---|---|---|---|---|
| All participants, n (%) | 200 (100) | 163 (81.5) | 26 (13) | |
| Diagnosis codes, n (%) | ||||
| AD/eczema M111.00 | 116 (58) | 98 (60) | 13 (50) | 0.330 |
| Infantile eczema M112.00 | 30 (15) | 24 (15) | 4 (15) | 0.930 |
| Flexural eczema M113.00 | 16 (8) | 13 (8) | 2 (8) | 0.960 |
| Allergic/intrinsic eczema M114.00 | 3 (2) | 3 (2) | 0 (0) | 0.486 |
| Eczema not otherwise specified M12z100 | 86 (43) | 73 (45) | 9 (34) | 0.331 |
| Mean number (SD) of the five eczema codes listed above | 1.3 (0.5) | 1.3 (0.6) | 1.1 (0.3) | 0.051 |
| Mean number (SD) of 32 likely eczema codes | 2.6 (2.9) | 2.8 (3.1) | 1.7 (1.2) | 0.070 |
| Mean number (SD) of 74 possible eczema codes | 4.0 (3.8) | 4.1 (3.9) | 3.2 (3.3) | 0.271 |
| Prescription codes | ||||
| Mean number (SD) of prescriptions for any AD-related therapy | 16.3 (24.5) | 17.5 (26) | 11.1 (15.0) | 0.226 |
| Mean number (SD) of topical steroid or calcineurin inhibitor prescriptions | 9 (15) | 6.6 (8.9) | 6.5 (7.9) | 0.953 |
| Mean number (SD) of AD-related systemic treatment codes | 0.4 (5.8) | 0.5 (6.4) | 0 (0) | 0.691 |
| Other | ||||
| Mean number (SD) of exclusionary diagnostic codes | 0.4 (1.7) | 0.3 (0.7) | 0.5 (1.6) | 0.281 |
| Total (%) with at least one exclusionary condition | 29 (15) | 25 (15.3) | 3 (11.5) | |
| Mean number (SD) of diagnostic procedure (biopsy or patch testing) codes | 0 | 0 | 0 | N/A |
| Mean number (SD) of dermatology consultation codes | 0.2 (1.1) | 0.3 (1.6) | 0.0 (0.2) | 0.308 |
| Total (%) with at least one dermatology consultation code | 19 (10) | 18 (11) | 1 (4) | |
| History of atopy, n (%) | 64 (39) | 56 (41) | 6 (24) | 0.110 |
| Male, n (%) | 100 (50) | 86 (53) | 9 (35) | 0.086 |
Abbreviation: AD, atopic dermatitis; N/A, not applicable; SD, standard deviation.
Columns do not sum to 200 because of missing values (seven unreturned surveys and four returned surveys missing a response to the eczema question).
See Supplementary Table S1.
Includes topical skin preparations, topical steroids, topical calcineurin inhibitors, topical anti-infective treatments, and AD-related systemic treatments (including methotrexate, azathioprine, mycophenolate, cyclosporine, biologics, or phototherapy); see Supplementary Table S2.
See Supplementary Table S3.
Per physician response on survey; defined as a history of other atopic disease (e.g., asthma or allergic rhinitis) for adults or a family history of atopic disease in a first degree relative if aged under 4 years.
Positive predictive value of coding algorithms
| True Positive/All Positive | % of Patients with Confirmed Eczema Identified | All | Children (Ages 0–17) | Adults (Ages 18+) | ||||
|---|---|---|---|---|---|---|---|---|
| PPV, % | 95% CI | PPV, % | 95% CI | PPV, % | 95% CI | |||
| Baseline algorithm; one of five eczema codes + at least two treatment codes on separate dates (survey selection criteria) | 163/189 | N/A | 86 | 80–91 | 90 | 83–96 | 82 | 73–89 |
| Alternative algorithms | ||||||||
| Baseline algorithm; at least one treatment is a topical steroid/TCI code | 157/183 | 96 | 86 | 80–91 | 90 | 81–95 | 82 | 73–89 |
| Baseline algorithm; at least two treatments are topical steroid/TCI codes | 133/153 | 82 | 87 | 81–92 | 91 | 82–97 | 84 | 74–91 |
| Baseline algorithm; at least one treatment is a topical steroid/TCI code either 3 months before or up to 1 year after the eczema code | 81/92 | 50 | 88 | 80–94 | 92 | 80–98 | 84 | 70–94 |
| Baseline algorithm + an additional eczema code (two eczema codes total) | 83/91 | 51 | 91 | 83–96 | 94 | 82–99 | 88 | 74–96 |
| Baseline algorithm + an additional eczema code (two eczema codes total); at least one treatment is a topical steroid/TCI code | 82/90 | 50 | 91 | 83–96 | 94 | 83–99 | 88 | 74–96 |
| Baseline algorithm + an additional eczema code (two eczema codes total); at least two treatments are topical steroid/TCI code | 133/153 | 82 | 87 | 81–92 | 91 | 82–97 | 84 | 74–91 |
| Baseline algorithm + no exclusionary condition code | 138/161 | 85 | 86 | 79–91 | 89 | 81–95 | 82 | 71–90 |
| Baseline algorithm + asthma or rhinitis code | 52/56 | 32 | 93 | 83–98 | 95 | 76–100 | 91 | 77–98 |
| Baseline algorithm + dermatology consult code | 18/19 | 11 | 95 | 74–100 | 100 | 54–100 | 92 | 64–100 |
Abbreviations: CI, confidence interval; PPV, positive predictive value; TCI, topical calcineurin inhibitor.
See Supplementary Tables S2 and S3 for lists of codes.
Age in years at diagnosis or at last disease activity requiring contact with the physician
| Distribution of Estimates by Source | Difference Between Physician Estimate from Survey and Database | |||
|---|---|---|---|---|
| Mean | 95% CI | Mean | 95% CI | |
| Age at diagnosis (n = 160) | ||||
| Physician survey | 17.9 | 14.3–21.4 | N/A | N/A |
| Database | ||||
| First diagnosis code | 17.1 | 13.5–20.6 | 0.8 | – 0.3 to 1.9 |
| First prescription for any eczema treatment | 17.4 | 13.9–21.0 | 0.4 | – 0.8 to 1.7 |
| If no symptoms in the year before the last visit date, age at last disease activity (n = 53) | ||||
| Physician survey | 20.7 | 14.3–27.2 | N/A | N/A |
| Database | ||||
| Last diagnosis code | 22.0 | 15.6–28.5 | –1.3 | – 2.5 to –0.1 |
| Last prescription for any eczema treatment | 24.6 | 14.3–27.2 | –3.9 | – 5.3 to –2.4 |
Abbreviations: CI, confidence interval; N/A, not applicable.
Any of the five most commonly used codes (atopic dermatitis/eczema M111.00, infantile eczema M112.00, flexural eczema M113.00, allergic/intrinsic eczema M114.00, or eczema not otherwise specified M12z100).
See Supplementary Table S2.