Literature DB >> 28412474

Kinetics for Drug Discovery: an industry-driven effort to target drug residence time.

Doris A Schuetz1, Wilhelmus Egbertus Arnout de Witte2, Yin Cheong Wong2, Bernhard Knasmueller1, Lars Richter1, Daria B Kokh3, S Kashif Sadiq3, Reggie Bosma4, Indira Nederpelt5, Laura H Heitman5, Elena Segala6, Marta Amaral7, Dong Guo5, Dorothee Andres8, Victoria Georgi8, Leigh A Stoddart9, Steve Hill9, Robert M Cooke6, Chris De Graaf4, Rob Leurs4, Matthias Frech10, Rebecca C Wade11, Elizabeth Cunera Maria de Lange2, Adriaan P IJzerman5, Anke Müller-Fahrnow8, Gerhard F Ecker12.   

Abstract

A considerable number of approved drugs show non-equilibrium binding characteristics, emphasizing the potential role of drug residence times for in vivo efficacy. Therefore, a detailed understanding of the kinetics of association and dissociation of a target-ligand complex might provide crucial insight into the molecular mechanism-of-action of a compound. This deeper understanding will help to improve decision making in drug discovery, thus leading to a better selection of interesting compounds to be profiled further. In this review, we highlight the contributions of the Kinetics for Drug Discovery (K4DD) Consortium, which targets major open questions related to binding kinetics in an industry-driven public-private partnership.
Copyright © 2017. Published by Elsevier Ltd.

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Year:  2017        PMID: 28412474     DOI: 10.1016/j.drudis.2017.02.002

Source DB:  PubMed          Journal:  Drug Discov Today        ISSN: 1359-6446            Impact factor:   7.851


  46 in total

Review 1.  A Chemical Biology Approach to the Chaperome in Cancer-HSP90 and Beyond.

Authors:  Tony Taldone; Tai Wang; Anna Rodina; Naga Vara Kishore Pillarsetty; Chander S Digwal; Sahil Sharma; Pengrong Yan; Suhasini Joshi; Piyusha P Pagare; Alexander Bolaender; Gail J Roboz; Monica L Guzman; Gabriela Chiosis
Journal:  Cold Spring Harb Perspect Biol       Date:  2020-04-01       Impact factor: 10.005

2.  Role of Molecular Interactions and Protein Rearrangement in the Dissociation Kinetics of p38α MAP Kinase Type-I/II/III Inhibitors.

Authors:  Wanli You; Chia-En A Chang
Journal:  J Chem Inf Model       Date:  2018-04-16       Impact factor: 4.956

3.  Variational implicit-solvent predictions of the dry-wet transition pathways for ligand-receptor binding and unbinding kinetics.

Authors:  Shenggao Zhou; R Gregor Weiß; Li-Tien Cheng; Joachim Dzubiella; J Andrew McCammon; Bo Li
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-03       Impact factor: 11.205

4.  Luciferase Complementation Approaches to Measure GPCR Signaling Kinetics and Bias.

Authors:  Nicola C Dijon; Desislava N Nesheva; Nicholas D Holliday
Journal:  Methods Mol Biol       Date:  2021

5.  Measuring Ligand Binding Kinetics to Membrane Proteins Using Virion Nano-oscillators.

Authors:  Guangzhong Ma; Guan-Da Syu; Xiaonan Shan; Brandon Henson; Shaopeng Wang; Prashant J Desai; Heng Zhu; Nongjian Tao
Journal:  J Am Chem Soc       Date:  2018-08-29       Impact factor: 15.419

6.  Multiscale Methods in Drug Design Bridge Chemical and Biological Complexity in the Search for Cures.

Authors:  Rommie E Amaro; Adrian J Mulholland
Journal:  Nat Rev Chem       Date:  2018-04-11       Impact factor: 34.035

7.  Correlating Drug-Target Residence Time and Post-antibiotic Effect: Insight into Target Vulnerability.

Authors:  Shabnam Davoodi; Fereidoon Daryaee; Andrew Chang; Stephen G Walker; Peter J Tonge
Journal:  ACS Infect Dis       Date:  2020-02-14       Impact factor: 5.084

8.  Escape of a Small Molecule from Inside T4 Lysozyme by Multiple Pathways.

Authors:  Ariane Nunes-Alves; Daniel M Zuckerman; Guilherme Menegon Arantes
Journal:  Biophys J       Date:  2018-03-13       Impact factor: 4.033

Review 9.  Fluorescent ligands: Bringing light to emerging GPCR paradigms.

Authors:  Mark Soave; Stephen J Briddon; Stephen J Hill; Leigh A Stoddart
Journal:  Br J Pharmacol       Date:  2020-02-06       Impact factor: 8.739

10.  The luminescent HiBiT peptide enables selective quantitation of G protein-coupled receptor ligand engagement and internalization in living cells.

Authors:  Michelle E Boursier; Sergiy Levin; Kris Zimmerman; Thomas Machleidt; Robin Hurst; Braeden L Butler; Christopher T Eggers; Thomas A Kirkland; Keith V Wood; Rachel Friedman Ohana
Journal:  J Biol Chem       Date:  2020-02-27       Impact factor: 5.157

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