Literature DB >> 28395340

Testicular adenosine to inosine RNA editing in the mouse is mediated by ADARB1.

Elizabeth M Snyder1, Konstantin Licht2, Robert E Braun1.   

Abstract

Adenosine to inosine (A-to-I) RNA editing occurs in a wide range of tissues and cell types and can be catalyzed by one of the two adenosine deaminase acting on double-stranded RNA enzymes, ADAR and ADARB1. Editing can impact both coding and noncoding regions of RNA, and in higher organisms has been proposed to function in adaptive evolution. Neither the prevalence of A-to-I editing nor the role of either ADAR or ADARB1 has been examined in the context of germ cell development in mammals. Computational analysis of whole testis and cell-type specific RNA-sequencing data followed by molecular confirmation demonstrated that A-to-I RNA editing occurs in both the germ line and in somatic Sertoli cells in two targets, Cog3 and Rpa1. Expression analysis demonstrated both Adar and Adarb1 were expressed in both Sertoli cells and in a cell-type dependent manner during germ cell development. Conditional ablation of Adar did not impact testicular RNA editing in either germ cells or Sertoli cells. Additionally, Adar ablation in either cell type did not have gross impacts on germ cell development or male fertility. In contrast, global Adarb1 knockout animals demonstrated a complete loss of A-to-I RNA editing in spite of normal germ cell development. Taken together, these observations demonstrate ADARB1 mediates A-to-I RNA editing in the testis and these editing events are dispensable for male fertility in an inbred mouse strain in the lab.
© The Authors 2016. Published by Oxford University Press on behalf of Society for the Study of Reproduction. All rights reserved. For permissions, please journals.permissions@oup.com.

Entities:  

Keywords:  ADAR; RNA editing; RNA modification; Sertoli cells; adenosine deaminase; meiosis; spermatids; spermatocytes; spermatogenesis

Mesh:

Substances:

Year:  2017        PMID: 28395340      PMCID: PMC6279061          DOI: 10.1095/biolreprod.116.145151

Source DB:  PubMed          Journal:  Biol Reprod        ISSN: 0006-3363            Impact factor:   4.285


  39 in total

1.  Point mutation in an AMPA receptor gene rescues lethality in mice deficient in the RNA-editing enzyme ADAR2.

Authors:  M Higuchi; S Maas; F N Single; J Hartner; A Rozov; N Burnashev; D Feldmeyer; R Sprengel; P H Seeburg
Journal:  Nature       Date:  2000-07-06       Impact factor: 49.962

2.  A third member of the RNA-specific adenosine deaminase gene family, ADAR3, contains both single- and double-stranded RNA binding domains.

Authors:  C X Chen; D S Cho; Q Wang; F Lai; K C Carter; K Nishikura
Journal:  RNA       Date:  2000-05       Impact factor: 4.942

3.  Genetic Architectures of Quantitative Variation in RNA Editing Pathways.

Authors:  Tongjun Gu; Daniel M Gatti; Anuj Srivastava; Elizabeth M Snyder; Narayanan Raghupathy; Petr Simecek; Karen L Svenson; Ivan Dotu; Jeffrey H Chuang; Mark P Keller; Alan D Attie; Robert E Braun; Gary A Churchill
Journal:  Genetics       Date:  2015-11-27       Impact factor: 4.562

4.  Altered RNA editing in mice lacking ADAR2 autoregulation.

Authors:  Yi Feng; Christopher L Sansam; Minati Singh; Ronald B Emeson
Journal:  Mol Cell Biol       Date:  2006-01       Impact factor: 4.272

5.  ADAR2 editing enzyme is a novel human immunodeficiency virus-1 proviral factor.

Authors:  Margherita Doria; Sara Tomaselli; Francesca Neri; Silvia Anna Ciafrè; Maria Giulia Farace; Alessandro Michienzi; Angela Gallo
Journal:  J Gen Virol       Date:  2011-02-02       Impact factor: 3.891

Review 6.  Adenosine deaminases acting on RNA (ADARs) are both antiviral and proviral.

Authors:  Charles E Samuel
Journal:  Virology       Date:  2011-01-05       Impact factor: 3.616

7.  Requirement of the RNA-editing enzyme ADAR2 for normal physiology in mice.

Authors:  Marion Horsch; Peter H Seeburg; Thure Adler; Juan Antonio Aguilar-Pimentel; Lore Becker; Julia Calzada-Wack; Lilian Garrett; Alexander Götz; Wolfgang Hans; Miyoko Higuchi; Sabine M Hölter; Beatrix Naton; Cornelia Prehn; Oliver Puk; Ildikó Rácz; Birgit Rathkolb; Jan Rozman; Anja Schrewe; Jerzy Adamski; Dirk H Busch; Irene Esposito; Jochen Graw; Boris Ivandic; Martin Klingenspor; Thomas Klopstock; Martin Mempel; Markus Ollert; Holger Schulz; Eckhard Wolf; Wolfgang Wurst; Andreas Zimmer; Valérie Gailus-Durner; Helmut Fuchs; Martin Hrabe de Angelis; Johannes Beckers
Journal:  J Biol Chem       Date:  2011-04-05       Impact factor: 5.157

Review 8.  Functions and regulation of RNA editing by ADAR deaminases.

Authors:  Kazuko Nishikura
Journal:  Annu Rev Biochem       Date:  2010       Impact factor: 23.643

9.  The RNA-editing enzyme ADAR1 controls innate immune responses to RNA.

Authors:  Niamh M Mannion; Sam M Greenwood; Robert Young; Sarah Cox; James Brindle; David Read; Christoffer Nellåker; Cornelia Vesely; Chris P Ponting; Paul J McLaughlin; Michael F Jantsch; Julia Dorin; Ian R Adams; A D J Scadden; Marie Ohman; Liam P Keegan; Mary A O'Connell
Journal:  Cell Rep       Date:  2014-11-13       Impact factor: 9.423

10.  A computational screen for site selective A-to-I editing detects novel sites in neuron specific Hu proteins.

Authors:  Mats Ensterö; Orjan Akerborg; Daniel Lundin; Bei Wang; Terrence S Furey; Marie Ohman; Jens Lagergren
Journal:  BMC Bioinformatics       Date:  2010-01-04       Impact factor: 3.169

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  9 in total

Review 1.  Do Gametes Woo? Evidence for Their Nonrandom Union at Fertilization.

Authors:  Joseph H Nadeau
Journal:  Genetics       Date:  2017-10       Impact factor: 4.562

2.  Landscape of RNA editing reveals new insights into the dynamic gene regulation of spermatogenesis.

Authors:  Xiaodan Wang; Xiaolong Wu; Zhenshuo Zhu; Hao Li; Tongtong Li; Qun Li; Peng Zhang; Leijie Li; Dongxue Che; Xia Xiao; Tong Liu; Jinlian Hua; Mingzhi Liao
Journal:  Cell Cycle       Date:  2019-10-09       Impact factor: 4.534

3.  Inosine RNA modifications are enriched at the codon wobble position in mouse oocytes and eggs†.

Authors:  Pavla Brachova; Nehemiah S Alvarez; Xiaoman Hong; Sumedha Gunewardena; Kailey A Vincent; Keith E Latham; Lane K Christenson
Journal:  Biol Reprod       Date:  2019-11-21       Impact factor: 4.285

4.  Identification of Adenosine-to-Inosine RNA Editing with Acrylonitrile Reagents.

Authors:  Ying Li; Matthias Göhl; Ke Ke; Christopher D Vanderwal; Robert C Spitale
Journal:  Org Lett       Date:  2019-09-13       Impact factor: 6.005

Review 5.  Rewriting the transcriptome: adenosine-to-inosine RNA editing by ADARs.

Authors:  Carl R Walkley; Jin Billy Li
Journal:  Genome Biol       Date:  2017-10-30       Impact factor: 13.583

6.  Protein recoding by ADAR1-mediated RNA editing is not essential for normal development and homeostasis.

Authors:  Jacki E Heraud-Farlow; Alistair M Chalk; Sandra E Linder; Qin Li; Scott Taylor; Joshua M White; Lokman Pang; Brian J Liddicoat; Ankita Gupte; Jin Billy Li; Carl R Walkley
Journal:  Genome Biol       Date:  2017-09-05       Impact factor: 13.583

7.  ADAD1 and ADAD2, testis-specific adenosine deaminase domain-containing proteins, are required for male fertility.

Authors:  Elizabeth Snyder; Lauren Chukrallah; Kelly Seltzer; Leslie Goodwin; Robert E Braun
Journal:  Sci Rep       Date:  2020-07-14       Impact factor: 4.379

8.  FUS driven circCNOT6L biogenesis in mouse and human spermatozoa supports zygote development.

Authors:  Teresa Chioccarelli; Geppino Falco; Donato Cappetta; Antonella De Angelis; Luca Roberto; Martina Addeo; Marco Ragusa; Davide Barbagallo; Liberato Berrino; Michele Purrello; Concetta Ambrosino; Gilda Cobellis; Riccardo Pierantoni; Rosanna Chianese; Francesco Manfrevola
Journal:  Cell Mol Life Sci       Date:  2021-12-22       Impact factor: 9.261

9.  Conservation of A-to-I RNA editing in bowhead whale and pig.

Authors:  Knud Larsen; Mads Peter Heide-Jørgensen
Journal:  PLoS One       Date:  2021-12-09       Impact factor: 3.240

  9 in total

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