Literature DB >> 20192758

Functions and regulation of RNA editing by ADAR deaminases.

Kazuko Nishikura1.   

Abstract

One type of RNA editing converts adenosines to inosines (A-->I editing) in double-stranded RNA (dsRNA) substrates. A-->I RNA editing is mediated by adenosine deaminase acting on RNA (ADAR) enzymes. A-->I RNA editing of protein-coding sequences of a limited number of mammalian genes results in recoding and subsequent alterations of their functions. However, A-->I RNA editing most frequently targets repetitive RNA sequences located within introns and 5' and 3' untranslated regions (UTRs). Although the biological significance of noncoding RNA editing remains largely unknown, several possibilities, including its role in the control of endogenous short interfering RNAs (esiRNAs), have been proposed. Furthermore, recent studies have revealed that the biogenesis and functions of certain microRNAs (miRNAs) are regulated by the editing of their precursors. Here, I review the recent findings that indicate new functions for A-->I editing in the regulation of noncoding RNAs and for interactions between RNA editing and RNA interference mechanisms.

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Year:  2010        PMID: 20192758      PMCID: PMC2953425          DOI: 10.1146/annurev-biochem-060208-105251

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  155 in total

1.  RNA editing of the human serotonin 5-HT2C receptor. alterations in suicide and implications for serotonergic pharmacotherapy.

Authors:  C M Niswender; K Herrick-Davis; G E Dilley; H Y Meltzer; J C Overholser; C A Stockmeier; R B Emeson; E Sanders-Bush
Journal:  Neuropsychopharmacology       Date:  2001-05       Impact factor: 7.853

2.  Comparative analysis of the DRADA A-to-I RNA editing gene from mammals, pufferfish and zebrafish.

Authors:  D Slavov; T Crnogorac-Jurcević; M Clark; K Gardiner
Journal:  Gene       Date:  2000-05-30       Impact factor: 3.688

3.  The RNA world meets behavior: A-->I pre-mRNA editing in animals.

Authors:  R A Reenan
Journal:  Trends Genet       Date:  2001-02       Impact factor: 11.639

4.  Our genome unveiled.

Authors:  D Baltimore
Journal:  Nature       Date:  2001-02-15       Impact factor: 49.962

Review 5.  Functions and mechanisms of RNA editing.

Authors:  J M Gott; R B Emeson
Journal:  Annu Rev Genet       Date:  2000       Impact factor: 16.830

6.  Point mutation in an AMPA receptor gene rescues lethality in mice deficient in the RNA-editing enzyme ADAR2.

Authors:  M Higuchi; S Maas; F N Single; J Hartner; A Rozov; N Burnashev; D Feldmeyer; R Sprengel; P H Seeburg
Journal:  Nature       Date:  2000-07-06       Impact factor: 49.962

7.  Requirement of the RNA editing deaminase ADAR1 gene for embryonic erythropoiesis.

Authors:  Q Wang; J Khillan; P Gadue; K Nishikura
Journal:  Science       Date:  2000-12-01       Impact factor: 47.728

8.  Human RNA-specific adenosine deaminase (ADAR1) gene specifies transcripts that initiate from a constitutively active alternative promoter.

Authors:  K Kawakubo; C E Samuel
Journal:  Gene       Date:  2000-11-27       Impact factor: 3.688

9.  dADAR, a Drosophila double-stranded RNA-specific adenosine deaminase is highly developmentally regulated and is itself a target for RNA editing.

Authors:  M J Palladino; L P Keegan; M A O'Connell; R A Reenan
Journal:  RNA       Date:  2000-07       Impact factor: 4.942

10.  A-to-I pre-mRNA editing in Drosophila is primarily involved in adult nervous system function and integrity.

Authors:  M J Palladino; L P Keegan; M A O'Connell; R A Reenan
Journal:  Cell       Date:  2000-08-18       Impact factor: 41.582

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  541 in total

1.  In search of beneficial coding RNA editing.

Authors:  Guixia Xu; Jianzhi Zhang
Journal:  Mol Biol Evol       Date:  2014-11-12       Impact factor: 16.240

2.  Host response to polyomavirus infection is modulated by RNA adenosine deaminase ADAR1 but not by ADAR2.

Authors:  Cyril X George; Charles E Samuel
Journal:  J Virol       Date:  2011-06-01       Impact factor: 5.103

3.  Serotonin 2c receptor RNA editing in major depression and suicide.

Authors:  Rebecca Lyddon; Andrew J Dwork; Mehdi Keddache; Larry J Siever; Stella Dracheva
Journal:  World J Biol Psychiatry       Date:  2012-03-09       Impact factor: 4.132

Review 4.  Activity regulation of adenosine deaminases acting on RNA (ADARs).

Authors:  Cesare Orlandi; Alessandro Barbon; Sergio Barlati
Journal:  Mol Neurobiol       Date:  2011-11-20       Impact factor: 5.590

Review 5.  Biological significance of RNA editing in cells.

Authors:  Wei Tang; Yongjun Fei; Michael Page
Journal:  Mol Biotechnol       Date:  2012-09       Impact factor: 2.695

6.  The Formation of Nucleobases from the Ultraviolet Photoirradiation of Purine in Simple Astrophysical Ice Analogues.

Authors:  Christopher K Materese; Michel Nuevo; Scott A Sandford
Journal:  Astrobiology       Date:  2017-07-19       Impact factor: 4.335

7.  Using multiplex single-base extension typing to screen for mutants defective in RNA editing.

Authors:  Mizuki Takenaka; Axel Brennicke
Journal:  Nat Protoc       Date:  2012-10-04       Impact factor: 13.491

8.  Breaching Self-Tolerance to Alu Duplex RNA Underlies MDA5-Mediated Inflammation.

Authors:  Sadeem Ahmad; Xin Mu; Fei Yang; Emily Greenwald; Ji Woo Park; Etai Jacob; Cheng-Zhong Zhang; Sun Hur
Journal:  Cell       Date:  2018-01-25       Impact factor: 41.582

9.  Human ADAR1 Prevents Endogenous RNA from Triggering Translational Shutdown.

Authors:  Hachung Chung; Jorg J A Calis; Xianfang Wu; Tony Sun; Yingpu Yu; Stephanie L Sarbanes; Viet Loan Dao Thi; Abigail R Shilvock; H-Heinrich Hoffmann; Brad R Rosenberg; Charles M Rice
Journal:  Cell       Date:  2018-01-25       Impact factor: 41.582

10.  Micro-editing mistake translates into a devastating brain tumor.

Authors:  Dan Dominissini; Ninette Amariglio; Gideon Rechavi
Journal:  J Clin Invest       Date:  2012-10-24       Impact factor: 14.808

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