Literature DB >> 19216935

AutoDecon: a robust numerical method for the quantification of pulsatile events.

Michael L Johnson1, Lenore Pipes, Paula P Veldhuis, Leon S Farhy, Ralf Nass, Michael O Thorner, William S Evans.   

Abstract

This work presents a new approach to the analysis of aperiodic pulsatile heteroscedastic time-series data, specifically hormone pulsatility. We have utilized growth hormone (GH) concentration time-series data as an example for the utilization of this new algorithm. While many previously published approaches used for the analysis of GH pulsatility are both subjective and cumbersome to use, AutoDecon is a nonsubjective, standardized, and completely automated algorithm. We have employed computer simulations to evaluate the true-positive, the false-positive, the false-negative, and the sensitivity percentages of several of the routinely employed algorithms when applied to GH concentration time-series data. Based on these simulations, it was concluded that this new algorithm provides a substantial improvement over the previous methods. This novel method has many direct applications in addition to hormone pulsatility, for example, to time-domain fluorescence lifetime measurements, as the mathematical forms that describe these experimental systems are both convolution integrals.

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Year:  2009        PMID: 19216935      PMCID: PMC2662594          DOI: 10.1016/S0076-6879(08)03815-9

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  20 in total

1.  Deconvolution analysis as a hormone pulse-detection algorithm.

Authors:  Michael L Johnson; Amelia Virostko; Johannes D Veldhuis; William S Evans
Journal:  Methods Enzymol       Date:  2004       Impact factor: 1.600

2.  Cluster analysis: a simple, versatile, and robust algorithm for endocrine pulse detection.

Authors:  J D Veldhuis; M L Johnson
Journal:  Am J Physiol       Date:  1986-04

3.  Detection and characterization of peaks and estimation of instantaneous secretory rate for episodic pulsatile hormone secretion.

Authors:  K E Oerter; V Guardabasso; D Rodbard
Journal:  Comput Biomed Res       Date:  1986-04

4.  Algorithms for the study of episodic hormone secretion.

Authors:  G R Merriam; K W Wachter
Journal:  Am J Physiol       Date:  1982-10

5.  On the sites of the negative and positive feedback actions of estradiol in the control of gonadotropin secretion in the rhesus monkey.

Authors:  Y Nakai; T M Plant; D L Hess; E J Keogh; E Knobil
Journal:  Endocrinology       Date:  1978-04       Impact factor: 4.736

6.  Generation of growth hormone pulsatility in women: evidence against somatostatin withdrawal as pulse initiator.

Authors:  E V Dimaraki; C A Jaffe; R Demott-Friberg; M Russell-Aulet; C Y Bowers; P Marbach; A L Barkan
Journal:  Am J Physiol Endocrinol Metab       Date:  2001-03       Impact factor: 4.310

7.  Plasma growth hormone responses to constant infusions of human pancreatic growth hormone releasing factor. Intermittent secretion or response attenuation.

Authors:  C B Webb; M L Vance; M O Thorner; G Perisutti; J Thominet; J Rivier; W Vale; L A Frohman
Journal:  J Clin Invest       Date:  1984-07       Impact factor: 14.808

8.  Pulsatile growth hormone secretion in normal man during a continuous 24-hour infusion of human growth hormone releasing factor (1-40). Evidence for intermittent somatostatin secretion.

Authors:  M L Vance; D L Kaiser; W S Evans; R Furlanetto; W Vale; J Rivier; M O Thorner
Journal:  J Clin Invest       Date:  1985-05       Impact factor: 14.808

9.  Episodic luteinizing hormone secretion in man. Pulse analysis, clinical interpretation, physiologic mechanisms.

Authors:  R J Santen; C W Bardin
Journal:  J Clin Invest       Date:  1973-10       Impact factor: 14.808

10.  AutoDecon, a deconvolution algorithm for identification and characterization of luteinizing hormone secretory bursts: description and validation using synthetic data.

Authors:  Michael L Johnson; Lenore Pipes; Paula P Veldhuis; Leon S Farhy; David G Boyd; William S Evans
Journal:  Anal Biochem       Date:  2008-07-04       Impact factor: 3.365

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  18 in total

1.  Validation of a deconvolution procedure (AutoDecon) for identification and characterization of fasting insulin secretory bursts.

Authors:  Michael L Johnson; Paula P Veldhuis; Tereza Grimmichova; Leon S Farhy; William S Evans
Journal:  J Diabetes Sci Technol       Date:  2010-09-01

2.  Identifying small pulsatile signals within noisy data: a fluorescence application.

Authors:  Michael L Johnson; Leon S Farhy; Paula P Veldhuis; Joseph R Lakowicz
Journal:  Methods Enzymol       Date:  2008       Impact factor: 1.600

Review 3.  Effects of growth hormone-releasing hormone on visceral fat, metabolic, and cardiovascular indices in human studies.

Authors:  Takara L Stanley; Steven K Grinspoon
Journal:  Growth Horm IGF Res       Date:  2014-12-20       Impact factor: 2.372

4.  The association of macro- and micronutrient intake with growth hormone secretion.

Authors:  S Denny-Brown; T L Stanley; S K Grinspoon; H Makimura
Journal:  Growth Horm IGF Res       Date:  2012-04-01       Impact factor: 2.372

5.  Relationship of adiponectin to endogenous GH pulse secretion parameters in response to stimulation with a growth hormone releasing factor.

Authors:  H Makimura; T L Stanley; C Y Chen; K L Branch; S K Grinspoon
Journal:  Growth Horm IGF Res       Date:  2011-04-30       Impact factor: 2.372

6.  Effects of a growth hormone-releasing hormone analog on endogenous GH pulsatility and insulin sensitivity in healthy men.

Authors:  Takara L Stanley; Cindy Y Chen; Karen L Branch; Hideo Makimura; Steven K Grinspoon
Journal:  J Clin Endocrinol Metab       Date:  2010-10-13       Impact factor: 5.958

7.  Age-dependent decline in acyl-ghrelin concentrations and reduced association of acyl-ghrelin and growth hormone in healthy older adults.

Authors:  Ralf Nass; Leon S Farhy; Jianhua Liu; Suzan S Pezzoli; Michael L Johnson; Bruce D Gaylinn; Michael O Thorner
Journal:  J Clin Endocrinol Metab       Date:  2013-11-27       Impact factor: 5.958

8.  Discordance of IGF-1 and GH stimulation testing for altered GH secretion in obesity.

Authors:  Takara L Stanley; Meghan N Feldpausch; Caitlin A Murphy; Steven K Grinspoon; Hideo Makimura
Journal:  Growth Horm IGF Res       Date:  2013-11-15       Impact factor: 2.372

9.  Amplification of pulsatile glucagon counterregulation by switch-off of alpha-cell-suppressing signals in streptozotocin-treated rats.

Authors:  Leon S Farhy; Zhongmin Du; Qiang Zeng; Paula P Veldhuis; Michael L Johnson; Kenneth L Brayman; Anthony L McCall
Journal:  Am J Physiol Endocrinol Metab       Date:  2008-06-24       Impact factor: 4.310

10.  Evidence for acyl-ghrelin modulation of growth hormone release in the fed state.

Authors:  Ralf Nass; Leon S Farhy; Jianhua Liu; Catherine E Prudom; Michael L Johnson; Paula Veldhuis; Suzan S Pezzoli; Mary Clancy Oliveri; Bruce D Gaylinn; H Mario Geysen; Michael O Thorner
Journal:  J Clin Endocrinol Metab       Date:  2008-03-11       Impact factor: 5.958

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