Literature DB >> 28385874

Epigenetic Age Acceleration Assessed with Human White-Matter Images.

Karen Hodgson1, Melanie A Carless2, Hemant Kulkarni3, Joanne E Curran3, Emma Sprooten4, Emma E Knowles5, Samuel Mathias5, Harald H H Göring3, Nailin Yao5, Rene L Olvera6, Peter T Fox7, Laura Almasy3, Ravi Duggirala3, John Blangero3, David C Glahn5,8.   

Abstract

The accurate estimation of age using methylation data has proved a useful and heritable biomarker, with acceleration in epigenetic age predicting a number of age-related phenotypes. Measures of white matter integrity in the brain are also heritable and highly sensitive to both normal and pathological aging processes across adulthood. We consider the phenotypic and genetic interrelationships between epigenetic age acceleration and white matter integrity in humans. Our goal was to investigate processes that underlie interindividual variability in age-related changes in the brain. Using blood taken from a Mexican-American extended pedigree sample (n = 628; age = 23.28-93.11 years), epigenetic age was estimated using the method developed by Horvath (2013). For n = 376 individuals, diffusion tensor imaging scans were also available. The interrelationship between epigenetic age acceleration and global white matter integrity was investigated with variance decomposition methods. To test for neuroanatomical specificity, 16 specific tracts were additionally considered. We observed negative phenotypic correlations between epigenetic age acceleration and global white matter tract integrity (ρpheno = -0.119, p = 0.028), with evidence of shared genetic (ρgene = -0.463, p = 0.013) but not environmental influences. Negative phenotypic and genetic correlations with age acceleration were also seen for a number of specific white matter tracts, along with additional negative phenotypic correlations between granulocyte abundance and white matter integrity. These findings (i.e., increased acceleration in epigenetic age in peripheral blood correlates with reduced white matter integrity in the brain and shares common genetic influences) provide a window into the neurobiology of aging processes within the brain and a potential biomarker of normal and pathological brain aging.SIGNIFICANCE STATEMENT Epigenetic measures can be used to predict age with a high degree of accuracy and so capture acceleration in biological age, relative to chronological age. The white matter tracts within the brain are also highly sensitive to aging processes. We show that increased biological aging (measured using epigenetic data from blood samples) is correlated with reduced integrity of white matter tracts within the human brain (measured using diffusion tensor imaging) with data from a large sample of Mexican-American families. Given the family design of the sample, we are also able to demonstrate that epigenetic aging and white matter tract integrity also share common genetic influences. Therefore, epigenetic age may be a potential, and accessible, biomarker of brain aging.
Copyright © 2017 the authors 0270-6474/17/374735-09$15.00/0.

Entities:  

Keywords:  aging; epigenetics; genetics; white matter integrity

Mesh:

Year:  2017        PMID: 28385874      PMCID: PMC5426566          DOI: 10.1523/JNEUROSCI.0177-17.2017

Source DB:  PubMed          Journal:  J Neurosci        ISSN: 0270-6474            Impact factor:   6.167


  44 in total

Review 1.  Diffusion tensor imaging and aging - a review.

Authors:  Michael Moseley
Journal:  NMR Biomed       Date:  2002 Nov-Dec       Impact factor: 4.044

2.  Whole brain and regional hyperintense white matter volume and blood pressure: overlap of genetic loci produced by bivariate, whole-genome linkage analyses.

Authors:  Peter Kochunov; David Glahn; Jack Lancaster; Anderson Winkler; Jack W Kent; Rene L Olvera; Shelley A Cole; Thomas D Dyer; Laura Almasy; Ravi Duggirala; Peter T Fox; John Blangero
Journal:  Stroke       Date:  2010-08-19       Impact factor: 7.914

3.  Age-related changes in grey and white matter structure throughout adulthood.

Authors:  Antonio Giorgio; Luca Santelli; Valentina Tomassini; Rose Bosnell; Steve Smith; Nicola De Stefano; Heidi Johansen-Berg
Journal:  Neuroimage       Date:  2010-03-06       Impact factor: 6.556

4.  The epigenetic clock is correlated with physical and cognitive fitness in the Lothian Birth Cohort 1936.

Authors:  Riccardo E Marioni; Sonia Shah; Allan F McRae; Stuart J Ritchie; Graciela Muniz-Terrera; Sarah E Harris; Jude Gibson; Paul Redmond; Simon R Cox; Alison Pattie; Janie Corley; Adele Taylor; Lee Murphy; John M Starr; Steve Horvath; Peter M Visscher; Naomi R Wray; Ian J Deary
Journal:  Int J Epidemiol       Date:  2015-01-22       Impact factor: 7.196

5.  Accelerated epigenetic aging in Down syndrome.

Authors:  Steve Horvath; Paolo Garagnani; Maria Giulia Bacalini; Chiara Pirazzini; Stefano Salvioli; Davide Gentilini; Anna Maria Di Blasio; Cristina Giuliani; Spencer Tung; Harry V Vinters; Claudio Franceschi
Journal:  Aging Cell       Date:  2015-02-09       Impact factor: 9.304

6.  DNA methylation-based measures of biological age: meta-analysis predicting time to death.

Authors:  Brian H Chen; Riccardo E Marioni; Elena Colicino; Marjolein J Peters; Cavin K Ward-Caviness; Pei-Chien Tsai; Nicholas S Roetker; Allan C Just; Ellen W Demerath; Weihua Guan; Jan Bressler; Myriam Fornage; Stephanie Studenski; Amy R Vandiver; Ann Zenobia Moore; Toshiko Tanaka; Douglas P Kiel; Liming Liang; Pantel Vokonas; Joel Schwartz; Kathryn L Lunetta; Joanne M Murabito; Stefania Bandinelli; Dena G Hernandez; David Melzer; Michael Nalls; Luke C Pilling; Timothy R Price; Andrew B Singleton; Christian Gieger; Rolf Holle; Anja Kretschmer; Florian Kronenberg; Sonja Kunze; Jakob Linseisen; Christine Meisinger; Wolfgang Rathmann; Melanie Waldenberger; Peter M Visscher; Sonia Shah; Naomi R Wray; Allan F McRae; Oscar H Franco; Albert Hofman; André G Uitterlinden; Devin Absher; Themistocles Assimes; Morgan E Levine; Ake T Lu; Philip S Tsao; Lifang Hou; JoAnn E Manson; Cara L Carty; Andrea Z LaCroix; Alexander P Reiner; Tim D Spector; Andrew P Feinberg; Daniel Levy; Andrea Baccarelli; Joyce van Meurs; Jordana T Bell; Annette Peters; Ian J Deary; James S Pankow; Luigi Ferrucci; Steve Horvath
Journal:  Aging (Albany NY)       Date:  2016-09-28       Impact factor: 5.682

7.  Multi-site genetic analysis of diffusion images and voxelwise heritability analysis: a pilot project of the ENIGMA-DTI working group.

Authors:  Neda Jahanshad; Peter V Kochunov; Emma Sprooten; René C Mandl; Thomas E Nichols; Laura Almasy; John Blangero; Rachel M Brouwer; Joanne E Curran; Greig I de Zubicaray; Ravi Duggirala; Peter T Fox; L Elliot Hong; Bennett A Landman; Nicholas G Martin; Katie L McMahon; Sarah E Medland; Braxton D Mitchell; Rene L Olvera; Charles P Peterson; John M Starr; Jessika E Sussmann; Arthur W Toga; Joanna M Wardlaw; Margaret J Wright; Hilleke E Hulshoff Pol; Mark E Bastin; Andrew M McIntosh; Ian J Deary; Paul M Thompson; David C Glahn
Journal:  Neuroimage       Date:  2013-04-28       Impact factor: 6.556

8.  DNA methylation age of human tissues and cell types.

Authors:  Steve Horvath
Journal:  Genome Biol       Date:  2013       Impact factor: 13.583

9.  Lifetime stress accelerates epigenetic aging in an urban, African American cohort: relevance of glucocorticoid signaling.

Authors:  Anthony S Zannas; Janine Arloth; Tania Carrillo-Roa; Stella Iurato; Simone Röh; Kerry J Ressler; Charles B Nemeroff; Alicia K Smith; Bekh Bradley; Christine Heim; Andreas Menke; Jennifer F Lange; Tanja Brückl; Marcus Ising; Naomi R Wray; Angelika Erhardt; Elisabeth B Binder; Divya Mehta
Journal:  Genome Biol       Date:  2015-12-17       Impact factor: 13.583

10.  Genetic variants near MLST8 and DHX57 affect the epigenetic age of the cerebellum.

Authors:  Ake T Lu; Eilis Hannon; Morgan E Levine; Ke Hao; Eileen M Crimmins; Katie Lunnon; Alexey Kozlenkov; Jonathan Mill; Stella Dracheva; Steve Horvath
Journal:  Nat Commun       Date:  2016-02-02       Impact factor: 14.919

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  9 in total

Review 1.  DNA Methylation Age-Environmental Influences, Health Impacts, and Its Role in Environmental Epidemiology.

Authors:  Radhika Dhingra; Jamaji C Nwanaji-Enwerem; Madeline Samet; Cavin K Ward-Caviness
Journal:  Curr Environ Health Rep       Date:  2018-09

2.  Perinatally acquired HIV infection accelerates epigenetic aging in South African adolescents.

Authors:  Steve Horvath; Dan J Stein; Nicole Phillips; Sarah J Heany; Michael S Kobor; David T S Lin; Landon Myer; Heather J Zar; Andrew J Levine; Jacqueline Hoare
Journal:  AIDS       Date:  2018-07-17       Impact factor: 4.177

Review 3.  Aging biomarkers and the brain.

Authors:  Albert T Higgins-Chen; Kyra L Thrush; Morgan E Levine
Journal:  Semin Cell Dev Biol       Date:  2021-01-25       Impact factor: 7.499

4.  Intrinsic and extrinsic epigenetic age acceleration are associated with hypertensive target organ damage in older African Americans.

Authors:  Jennifer A Smith; Jeremy Raisky; Scott M Ratliff; Jiaxuan Liu; Sharon L R Kardia; Stephen T Turner; Thomas H Mosley; Wei Zhao
Journal:  BMC Med Genomics       Date:  2019-10-22       Impact factor: 3.063

5.  Alteration of the brain methylation landscape following postnatal inflammatory injury in rat pups.

Authors:  Wyston C Pierre; Lisa-Marie Legault; Irene Londono; Serge McGraw; Gregory A Lodygensky
Journal:  FASEB J       Date:  2019-11-22       Impact factor: 5.191

6.  Comprehensive analysis of epigenetic clocks reveals associations between disproportionate biological ageing and hippocampal volume.

Authors:  Lidija Milicic; Michael Vacher; Tenielle Porter; Vincent Doré; Samantha C Burnham; Pierrick Bourgeat; Rosita Shishegar; James Doecke; Nicola J Armstrong; Rick Tankard; Paul Maruff; Colin L Masters; Christopher C Rowe; Victor L Villemagne; Simon M Laws
Journal:  Geroscience       Date:  2022-04-21       Impact factor: 7.581

Review 7.  DNA methylation and brain structure and function across the life course: A systematic review.

Authors:  Emily N W Wheater; David Q Stoye; Simon R Cox; Joanna M Wardlaw; Amanda J Drake; Mark E Bastin; James P Boardman
Journal:  Neurosci Biobehav Rev       Date:  2020-03-06       Impact factor: 8.989

8.  Association of Epigenetic Metrics of Biological Age With Cortical Thickness.

Authors:  Amy L Proskovec; Michael T Rezich; Jennifer O'Neill; Brenda Morsey; Tina Wang; Trey Ideker; Susan Swindells; Howard S Fox; Tony W Wilson
Journal:  JAMA Netw Open       Date:  2020-09-01

9.  Combining evidence from four immune cell types identifies DNA methylation patterns that implicate functionally distinct pathways during Multiple Sclerosis progression.

Authors:  Ewoud Ewing; Lara Kular; Sunjay J Fernandes; Nestoras Karathanasis; Vincenzo Lagani; Sabrina Ruhrmann; Ioannis Tsamardinos; Jesper Tegner; Fredrik Piehl; David Gomez-Cabrero; Maja Jagodic
Journal:  EBioMedicine       Date:  2019-04-30       Impact factor: 8.143

  9 in total

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