Literature DB >> 28384080

Scarless assembly of unphosphorylated DNA fragments with a simplified DATEL method.

Wenwen Ding1,2, Huanjiao Weng1,2, Peng Jin1,2, Guocheng Du1,2, Jian Chen1,2, Zhen Kang1,2,3.   

Abstract

Efficient assembly of multiple DNA fragments is a pivotal technology for synthetic biology. A scarless and sequence-independent DNA assembly method (DATEL) using thermal exonucleases has been developed recently. Here, we present a simplified DATEL (sDATEL) for efficient assembly of unphosphorylated DNA fragments with low cost. The sDATEL method is only dependent on Taq DNA polymerase and Taq DNA ligase. After optimizing the committed parameters of the reaction system such as pH and the concentration of Mg2+ and NAD+, the assembly efficiency was increased by 32-fold. To further improve the assembly capacity, the number of thermal cycles was optimized, resulting in successful assembly 4 unphosphorylated DNA fragments with an accuracy of 75%. sDATEL could be a desirable method for routine manual and automated assembly.

Entities:  

Keywords:  DNA assembly; PCR; Simplified DATEL; Synthetic biology; Unphosphorylated DNA fragments

Mesh:

Substances:

Year:  2017        PMID: 28384080      PMCID: PMC5470510          DOI: 10.1080/21655979.2017.1308986

Source DB:  PubMed          Journal:  Bioengineered        ISSN: 2165-5979            Impact factor:   3.269


  24 in total

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8.  Advancing uracil-excision based cloning towards an ideal technique for cloning PCR fragments.

Authors:  Hussam H Nour-Eldin; Bjarne G Hansen; Morten H H Nørholm; Jacob K Jensen; Barbara A Halkier
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