Literature DB >> 28375744

Ubiquitin Ligases: Structure, Function, and Regulation.

Ning Zheng1, Nitzan Shabek1.   

Abstract

Ubiquitin E3 ligases control every aspect of eukaryotic biology by promoting protein ubiquitination and degradation. At the end of a three-enzyme cascade, ubiquitin ligases mediate the transfer of ubiquitin from an E2 ubiquitin-conjugating enzyme to specific substrate proteins. Early investigations of E3s of the RING (really interesting new gene) and HECT (homologous to the E6AP carboxyl terminus) types shed light on their enzymatic activities, general architectures, and substrate degron-binding modes. Recent studies have provided deeper mechanistic insights into their catalysis, activation, and regulation. In this review, we summarize the current progress in structure-function studies of ubiquitin ligases as well as exciting new discoveries of novel classes of E3s and diverse substrate recognition mechanisms. Our increased understanding of ubiquitin ligase function and regulation has provided the rationale for developing E3-targeting therapeutics for the treatment of human diseases.

Entities:  

Keywords:  PTM; agonist; degron; posttranslational modification; ubiquitin ligase; ubiquitination

Mesh:

Substances:

Year:  2017        PMID: 28375744     DOI: 10.1146/annurev-biochem-060815-014922

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  348 in total

1.  Two distinct E3 ligases, SCFFBXL19 and HECW1, degrade thyroid transcription factor 1 in normal thyroid epithelial and follicular thyroid carcinoma cells, respectively.

Authors:  Jia Liu; Su Dong; Heather Wang; Lian Li; Qinmao Ye; Yanhui Li; Jiaxing Miao; Sissy Jhiang; Jing Zhao; Yutong Zhao
Journal:  FASEB J       Date:  2019-06-25       Impact factor: 5.191

Review 2.  Deubiquitylating enzymes in neuronal health and disease.

Authors:  Fatima Amer-Sarsour; Alina Kordonsky; Yevgeny Berdichevsky; Gali Prag; Avraham Ashkenazi
Journal:  Cell Death Dis       Date:  2021-01-22       Impact factor: 8.469

Review 3.  Targeting the turnover of oncoproteins as a new avenue for therapeutics development in castration-resistant prostate cancer.

Authors:  Shan Wang; Dede N Ekoue; Ganesh V Raj; Ralf Kittler
Journal:  Cancer Lett       Date:  2018-09-11       Impact factor: 8.679

4.  Trafficking of the human ether-a-go-go-related gene (hERG) potassium channel is regulated by the ubiquitin ligase rififylin (RFFL).

Authors:  Karim Roder; Anatoli Kabakov; Karni S Moshal; Kevin R Murphy; An Xie; Samuel Dudley; Nilüfer N Turan; Yichun Lu; Calum A MacRae; Gideon Koren
Journal:  J Biol Chem       Date:  2018-11-06       Impact factor: 5.157

5.  Specificity for latent C termini links the E3 ubiquitin ligase CHIP to caspases.

Authors:  Matthew Ravalin; Panagiotis Theofilas; Koli Basu; Kwadwo A Opoku-Nsiah; Victoria A Assimon; Daniel Medina-Cleghorn; Yi-Fan Chen; Markus F Bohn; Michelle Arkin; Lea T Grinberg; Charles S Craik; Jason E Gestwicki
Journal:  Nat Chem Biol       Date:  2019-07-18       Impact factor: 15.040

Review 6.  Structural basis of generic versus specific E2-RING E3 interactions in protein ubiquitination.

Authors:  Mehmet Gundogdu; Helen Walden
Journal:  Protein Sci       Date:  2019-08-23       Impact factor: 6.725

Review 7.  Post-translational control of the long and winding road to cholesterol.

Authors:  Laura J Sharpe; Hudson W Coates; Andrew J Brown
Journal:  J Biol Chem       Date:  2020-12-18       Impact factor: 5.157

8.  OTUD4 Is a Phospho-Activated K63 Deubiquitinase that Regulates MyD88-Dependent Signaling.

Authors:  Yu Zhao; Miranda C Mudge; Jennifer M Soll; Rachel B Rodrigues; Andrea K Byrum; Elizabeth A Schwarzkopf; Tara R Bradstreet; Steven P Gygi; Brian T Edelson; Nima Mosammaparast
Journal:  Mol Cell       Date:  2018-02-01       Impact factor: 17.970

Review 9.  Ubiquitin-proteasome signaling in lung injury.

Authors:  Natalia D Magnani; Laura A Dada; Jacob I Sznajder
Journal:  Transl Res       Date:  2018-04-23       Impact factor: 7.012

10.  Exploring the Functional Consequences of Protein Backbone Alteration in Ubiquitin through Native Chemical Ligation.

Authors:  Halina M Werner; Samuel K Estabrooks; G Michael Preston; Jeffrey L Brodsky; W Seth Horne
Journal:  Chembiochem       Date:  2019-08-23       Impact factor: 3.164

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