Literature DB >> 31320752

Specificity for latent C termini links the E3 ubiquitin ligase CHIP to caspases.

Matthew Ravalin1, Panagiotis Theofilas2, Koli Basu1, Kwadwo A Opoku-Nsiah1, Victoria A Assimon1, Daniel Medina-Cleghorn1, Yi-Fan Chen1,3, Markus F Bohn1, Michelle Arkin1, Lea T Grinberg2,4,5,6, Charles S Craik7, Jason E Gestwicki8,9.   

Abstract

Protein-protein interactions between E3 ubiquitin ligases and protein termini help shape the proteome. These interactions are sensitive to proteolysis, which alters the ensemble of cellular N and C termini. Here we describe a mechanism wherein caspase activity reveals latent C termini that are then recognized by the E3 ubiquitin ligase CHIP. Using expanded knowledge of CHIP's binding specificity, we predicted hundreds of putative interactions arising from caspase activity. Subsequent validation experiments confirmed that CHIP binds the latent C termini at tauD421 and caspase-6D179. CHIP binding to tauD421, but not tauFL, promoted its ubiquitination, while binding to caspase-6D179 mediated ubiquitin-independent inhibition. Given that caspase activity generates tauD421 in Alzheimer's disease (AD), these results suggested a concise model for CHIP regulation of tau homeostasis. Indeed, we find that loss of CHIP expression in AD coincides with the accumulation of tauD421 and caspase-6D179. These results illustrate an unanticipated link between caspases and protein homeostasis.

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Year:  2019        PMID: 31320752      PMCID: PMC6693490          DOI: 10.1038/s41589-019-0322-6

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  54 in total

1.  Structure of TPR domain-peptide complexes: critical elements in the assembly of the Hsp70-Hsp90 multichaperone machine.

Authors:  C Scheufler; A Brinker; G Bourenkov; S Pegoraro; L Moroder; H Bartunik; F U Hartl; I Moarefi
Journal:  Cell       Date:  2000-04-14       Impact factor: 41.582

2.  CHIP is a U-box-dependent E3 ubiquitin ligase: identification of Hsc70 as a target for ubiquitylation.

Authors:  J Jiang; C A Ballinger; Y Wu; Q Dai; D M Cyr; J Höhfeld; C Patterson
Journal:  J Biol Chem       Date:  2001-09-13       Impact factor: 5.157

Review 3.  The N-end rule pathway and regulation by proteolysis.

Authors:  Alexander Varshavsky
Journal:  Protein Sci       Date:  2011-08       Impact factor: 6.725

4.  Quantitative MS-based enzymology of caspases reveals distinct protein substrate specificities, hierarchies, and cellular roles.

Authors:  Olivier Julien; Min Zhuang; Arun P Wiita; Anthony J O'Donoghue; Giselle M Knudsen; Charles S Craik; James A Wells
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-22       Impact factor: 11.205

5.  Molecular basis of GID4-mediated recognition of degrons for the Pro/N-end rule pathway.

Authors:  Cheng Dong; Heng Zhang; Li Li; Wolfram Tempel; Peter Loppnau; Jinrong Min
Journal:  Nat Chem Biol       Date:  2018-04-09       Impact factor: 15.040

6.  Identification of CHIP, a novel tetratricopeptide repeat-containing protein that interacts with heat shock proteins and negatively regulates chaperone functions.

Authors:  C A Ballinger; P Connell; Y Wu; Z Hu; L J Thompson; L Y Yin; C Patterson
Journal:  Mol Cell Biol       Date:  1999-06       Impact factor: 4.272

7.  Brain bank of the Brazilian aging brain study group - a milestone reached and more than 1,600 collected brains.

Authors:  Lea Tenenholz Grinberg; Renata Eloah de Lucena Ferretti; José Marcelo Farfel; Renata Leite; Carlos Augusto Pasqualucci; Sérgio Rosemberg; Ricardo Nitrini; Paulo Hilário Nascimento Saldiva; Wilson Jacob Filho
Journal:  Cell Tissue Bank       Date:  2006-10-31       Impact factor: 1.522

8.  Tau post-translational modifications in wild-type and human amyloid precursor protein transgenic mice.

Authors:  Meaghan Morris; Giselle M Knudsen; Sumihiro Maeda; Jonathan C Trinidad; Alexandra Ioanoviciu; Alma L Burlingame; Lennart Mucke
Journal:  Nat Neurosci       Date:  2015-07-20       Impact factor: 24.884

9.  A specificity map for the PDZ domain family.

Authors:  Raffi Tonikian; Yingnan Zhang; Stephen L Sazinsky; Bridget Currell; Jung-Hua Yeh; Boris Reva; Heike A Held; Brent A Appleton; Marie Evangelista; Yan Wu; Xiaofeng Xin; Andrew C Chan; Somasekar Seshagiri; Laurence A Lasky; Chris Sander; Charles Boone; Gary D Bader; Sachdev S Sidhu
Journal:  PLoS Biol       Date:  2008-09-30       Impact factor: 8.029

Review 10.  Tau Proteolysis in the Pathogenesis of Tauopathies: Neurotoxic Fragments and Novel Biomarkers.

Authors:  James P Quinn; Nicola J Corbett; Katherine A B Kellett; Nigel M Hooper
Journal:  J Alzheimers Dis       Date:  2018       Impact factor: 4.472

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  19 in total

1.  Hsp70:CHIP Ubiquitinates Dysfunctional but Not Native Neuronal NO Synthase.

Authors:  Amanda K Davis; Natalie F McMyn; Miranda Lau; Yoshihiro Morishima; Yoichi Osawa
Journal:  Mol Pharmacol       Date:  2020-06-26       Impact factor: 4.436

2.  Deep profiling of protease substrate specificity enabled by dual random and scanned human proteome substrate phage libraries.

Authors:  Jie Zhou; Shantao Li; Kevin K Leung; Brian O'Donovan; James Y Zou; Joseph L DeRisi; James A Wells
Journal:  Proc Natl Acad Sci U S A       Date:  2020-09-24       Impact factor: 11.205

3.  Colloidal Aggregators in Biochemical SARS-CoV-2 Repurposing Screens.

Authors:  Henry R O'Donnell; Tia A Tummino; Conner Bardine; Charles S Craik; Brian K Shoichet
Journal:  J Med Chem       Date:  2021-11-23       Impact factor: 7.446

4.  The structure of an Hsp90-immunophilin complex reveals cochaperone recognition of the client maturation state.

Authors:  Kanghyun Lee; Aye C Thwin; Cory M Nadel; Eric Tse; Stephanie N Gates; Jason E Gestwicki; Daniel R Southworth
Journal:  Mol Cell       Date:  2021-08-10       Impact factor: 19.328

5.  A STUB1 ubiquitin ligase/CHIC2 protein complex negatively regulates the IL-3, IL-5, and GM-CSF cytokine receptor common β chain (CSF2RB) protein stability.

Authors:  Sebastian H J Koochaki; Mikołaj Słabicki; Ryan Lumpkin; Charles Zou; Roger Belizaire; Eric S Fischer; Benjamin L Ebert
Journal:  J Biol Chem       Date:  2022-09-12       Impact factor: 5.486

Review 6.  Site-specific ubiquitination: Deconstructing the degradation tag.

Authors:  Emma C Carroll; Susan Marqusee
Journal:  Curr Opin Struct Biol       Date:  2022-03-02       Impact factor: 7.786

7.  Luminescence complementation assay for measurement of binding to protein C-termini in live cells.

Authors:  Cory M Nadel; Xu Ran; Jason E Gestwicki
Journal:  Anal Biochem       Date:  2020-09-10       Impact factor: 3.365

8.  Molecular basis for arginine C-terminal degron recognition by Cul2FEM1 E3 ligase.

Authors:  Xinyan Chen; Shanhui Liao; Yaara Makaros; Qiong Guo; Zhongliang Zhu; Rina Krizelman; Karin Dahan; Xiaoming Tu; Xuebiao Yao; Itay Koren; Chao Xu
Journal:  Nat Chem Biol       Date:  2021-01-04       Impact factor: 15.040

Review 9.  How the ends signal the end: Regulation by E3 ubiquitin ligases recognizing protein termini.

Authors:  Dawafuti Sherpa; Jakub Chrustowicz; Brenda A Schulman
Journal:  Mol Cell       Date:  2022-03-04       Impact factor: 19.328

Review 10.  End-Binding E3 Ubiquitin Ligases Enable Protease Signaling.

Authors:  Matthew Ravalin; Koli Basu; Jason E Gestwicki; Charles S Craik
Journal:  ACS Chem Biol       Date:  2019-11-20       Impact factor: 4.634

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