Literature DB >> 28373563

Nit1 is a metabolite repair enzyme that hydrolyzes deaminated glutathione.

Alessio Peracchi1,2,3, Maria Veiga-da-Cunha1,2, Tomiko Kuhara4,5, Kenneth W Ellens6, Nicole Paczia6, Vincent Stroobant7, Agnieszka K Seliga8,2, Simon Marlaire8,2, Stephane Jaisson8,2, Guido T Bommer8,2, Jin Sun9, Kay Huebner9, Carole L Linster6, Arthur J L Cooper10, Emile Van Schaftingen1,2.   

Abstract

The mammalian gene Nit1 (nitrilase-like protein 1) encodes a protein that is highly conserved in eukaryotes and is thought to act as a tumor suppressor. Despite being ∼35% sequence identical to ω-amidase (Nit2), the Nit1 protein does not hydrolyze efficiently α-ketoglutaramate (a known physiological substrate of Nit2), and its actual enzymatic function has so far remained a puzzle. In the present study, we demonstrate that both the mammalian Nit1 and its yeast ortholog are amidases highly active toward deaminated glutathione (dGSH; i.e., a form of glutathione in which the free amino group has been replaced by a carbonyl group). We further show that Nit1-KO mutants of both human and yeast cells accumulate dGSH and the same compound is excreted in large amounts in the urine of Nit1-KO mice. Finally, we show that several mammalian aminotransferases (transaminases), both cytosolic and mitochondrial, can form dGSH via a common (if slow) side-reaction and provide indirect evidence that transaminases are mainly responsible for dGSH formation in cultured mammalian cells. Altogether, these findings delineate a typical instance of metabolite repair, whereby the promiscuous activity of some abundant enzymes of primary metabolism leads to the formation of a useless and potentially harmful compound, which needs a suitable "repair enzyme" to be destroyed or reconverted into a useful metabolite. The need for a dGSH repair reaction does not appear to be limited to eukaryotes: We demonstrate that Nit1 homologs acting as excellent dGSH amidases also occur in Escherichia coli and other glutathione-producing bacteria.

Entities:  

Keywords:  amidase; aminotransferases; deaminated glutathione; metabolite repair

Mesh:

Substances:

Year:  2017        PMID: 28373563      PMCID: PMC5402446          DOI: 10.1073/pnas.1613736114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  43 in total

1.  Substrate mimicry in an activity-based probe that targets the nitrilase family of enzymes.

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3.  Coenzyme A disulfide reductase, the primary low molecular weight disulfide reductase from Staphylococcus aureus. Purification and characterization of the native enzyme.

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4.  Molecular identification of omega-amidase, the enzyme that is functionally coupled with glutamine transaminases, as the putative tumor suppressor Nit2.

Authors:  Stéphane Jaisson; Maria Veiga-da-Cunha; Emile Van Schaftingen
Journal:  Biochimie       Date:  2009-07-14       Impact factor: 4.079

5.  C7orf10 encodes succinate-hydroxymethylglutarate CoA-transferase, the enzyme that converts glutarate to glutaryl-CoA.

Authors:  Simon Marlaire; Emile Van Schaftingen; Maria Veiga-da-Cunha
Journal:  J Inherit Metab Dis       Date:  2013-07-27       Impact factor: 4.982

6.  Nit1 and Fhit tumor suppressor activities are additive.

Authors:  Jin Sun; Hiroshi Okumura; Martha Yearsley; Wendy Frankel; Louise Y Fong; Teresa Druck; Kay Huebner
Journal:  J Cell Biochem       Date:  2009-08-15       Impact factor: 4.429

7.  Many fructosamine 3-kinase homologues in bacteria are ribulosamine/erythrulosamine 3-kinases potentially involved in protein deglycation.

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Journal:  FEBS J       Date:  2007-08-06       Impact factor: 5.542

8.  Identification of a mitochondrial form of kynurenine aminotransferase/glutamine transaminase K from rat brain.

Authors:  P Malherbe; D Alberati-Giani; C Köhler; A M Cesura
Journal:  FEBS Lett       Date:  1995-06-26       Impact factor: 4.124

9.  Recombinant production of eight human cytosolic aminotransferases and assessment of their potential involvement in glyoxylate metabolism.

Authors:  Stefano Donini; Manuela Ferrari; Chiara Fedeli; Marco Faini; Ilaria Lamberto; Ada Serena Marletta; Lara Mellini; Michela Panini; Riccardo Percudani; Loredano Pollegioni; Laura Caldinelli; Stefania Petrucco; Alessio Peracchi
Journal:  Biochem J       Date:  2009-08-13       Impact factor: 3.857

10.  Nitrilase and Fhit homologs are encoded as fusion proteins in Drosophila melanogaster and Caenorhabditis elegans.

Authors:  Y Pekarsky; M Campiglio; Z Siprashvili; T Druck; Y Sedkov; S Tillib; A Draganescu; P Wermuth; J H Rothman; K Huebner; A M Buchberg; A Mazo; C Brenner; C M Croce
Journal:  Proc Natl Acad Sci U S A       Date:  1998-07-21       Impact factor: 11.205

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Review 5.  Inborn errors of metabolite repair.

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6.  Familial deep cavitating state with a glutathione metabolism defect.

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8.  Using Steady-State Kinetics to Quantitate Substrate Selectivity and Specificity: A Case Study with Two Human Transaminases.

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9.  Human cytosolic transaminases: side activities and patterns of discrimination towards physiologically available alternative substrates.

Authors:  Francesco Caligiore; Erika Zangelmi; Carola Vetro; Takfarinas Kentache; Joseph P Dewulf; Maria Veiga-da-Cunha; Emile Van Schaftingen; Guido Bommer; Alessio Peracchi
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  10 in total

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