Literature DB >> 19545238

Recombinant production of eight human cytosolic aminotransferases and assessment of their potential involvement in glyoxylate metabolism.

Stefano Donini1, Manuela Ferrari, Chiara Fedeli, Marco Faini, Ilaria Lamberto, Ada Serena Marletta, Lara Mellini, Michela Panini, Riccardo Percudani, Loredano Pollegioni, Laura Caldinelli, Stefania Petrucco, Alessio Peracchi.   

Abstract

PH1 (primary hyperoxaluria type 1) is a severe inborn disorder of glyoxylate metabolism caused by a functional deficiency of the peroxisomal enzyme AGXT (alanine-glyoxylate aminotransferase), which converts glyoxylate into glycine using L-alanine as the amino-group donor. Even though pre-genomic studies indicate that other human transaminases can convert glyoxylate into glycine, in PH1 patients these enzymes are apparently unable to compensate for the lack of AGXT, perhaps due to their limited levels of expression, their localization in an inappropriate cell compartment or the scarcity of the required amino-group donor. In the present paper, we describe the cloning of eight human cytosolic aminotransferases, their recombinant expression as His6-tagged proteins and a comparative study on their ability to transaminate glyoxylate, using any standard amino acid as an amino-group donor. To selectively quantify the glycine formed, we have developed and validated an assay based on bacterial GO (glycine oxidase); this assay allows the detection of enzymes that produce glycine by transamination in the presence of mixtures of potential amino-group donors and without separation of the product from the substrates. We show that among the eight enzymes tested, only GPT (alanine transaminase) and PSAT1 (phosphoserine aminotransferase 1) can transaminate glyoxylate with good efficiency, using L-glutamate (and, for GPT, also L-alanine) as the best amino-group donor. These findings confirm that glyoxylate transamination can occur in the cytosol, in direct competition with the conversion of glyoxylate into oxalate. The potential implications for the treatment of primary hyperoxaluria are discussed.

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Year:  2009        PMID: 19545238     DOI: 10.1042/BJ20090748

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  13 in total

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2.  Structural characterization of human O-phosphoethanolamine phospho-lyase.

Authors:  Chiara Vettraino; Alessio Peracchi; Stefano Donini; Emilio Parisini
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2020-04-01       Impact factor: 1.056

3.  Tyrosine aminotransferase: biochemical and structural properties and molecular dynamics simulations.

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4.  Nit1 is a metabolite repair enzyme that hydrolyzes deaminated glutathione.

Authors:  Alessio Peracchi; Maria Veiga-da-Cunha; Tomiko Kuhara; Kenneth W Ellens; Nicole Paczia; Vincent Stroobant; Agnieszka K Seliga; Simon Marlaire; Stephane Jaisson; Guido T Bommer; Jin Sun; Kay Huebner; Carole L Linster; Arthur J L Cooper; Emile Van Schaftingen
Journal:  Proc Natl Acad Sci U S A       Date:  2017-04-03       Impact factor: 11.205

5.  Endogenous Oxalate Production in Primary Hyperoxaluria Type 1 Patients.

Authors:  Sander Garrelfs; Dewi van Harskamp; Hessel Peters-Sengers; Chris van den Akker; Ronald Wanders; Frits Wijburg; Johannes van Goudoever; Jaap Groothoff; Henk Schierbeek; Michiel Oosterveld
Journal:  J Am Soc Nephrol       Date:  2021-10-22       Impact factor: 10.121

6.  The B6 database: a tool for the description and classification of vitamin B6-dependent enzymatic activities and of the corresponding protein families.

Authors:  Riccardo Percudani; Alessio Peracchi
Journal:  BMC Bioinformatics       Date:  2009-09-01       Impact factor: 3.169

7.  Molecular characterization of novel pyridoxal-5'-phosphate-dependent enzymes from the human microbiome.

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Journal:  Protein Sci       Date:  2014-06-14       Impact factor: 6.725

8.  New insights into the mechanism of substrates trafficking in Glyoxylate/Hydroxypyruvate reductases.

Authors:  Louise Lassalle; Sylvain Engilberge; Dominique Madern; Pierre Vauclare; Bruno Franzetti; Eric Girard
Journal:  Sci Rep       Date:  2016-02-11       Impact factor: 4.379

9.  Reduction in urinary oxalate excretion in mouse models of Primary Hyperoxaluria by RNA interference inhibition of liver lactate dehydrogenase activity.

Authors:  Kyle D Wood; Ross P Holmes; David Erbe; Abigail Liebow; Sonia Fargue; John Knight
Journal:  Biochim Biophys Acta Mol Basis Dis       Date:  2019-05-02       Impact factor: 5.187

10.  In Silico Modeling of Liver Metabolism in a Human Disease Reveals a Key Enzyme for Histidine and Histamine Homeostasis.

Authors:  Roberto Pagliarini; Raffaele Castello; Francesco Napolitano; Roberta Borzone; Patrizia Annunziata; Giorgia Mandrile; Mario De Marchi; Nicola Brunetti-Pierri; Diego di Bernardo
Journal:  Cell Rep       Date:  2016-05-26       Impact factor: 9.423

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